CX069661

Overview
NameCX069661
Unique NameCX069661
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_SHEFN (Bifunctional protein folD OS=Shewanella frigidimarina (strain NCIMB 400) GN=folD PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.521e-48
Identity = 106/231 (45.89%), Postives = 139/231 (60.17%), Query Frame = -3
Query:  181 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTL 873
            KRKAC EVG +S   DL  + +EAEL++ + E NA P + GILVQLPLP HI++ KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +G+   G  A VVG SNIVG P++L LL A  T T  H  T + E  VR+AD+++ A G+   I G WIKPGA VIDVG N +++ +      LVGDV+F+ A +                   LL NTL
Sbjct:   54 KRKACEEVGFESQSFDLDTETTEAELLALIDECNANPSIDGILVQLPLPAHIDDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGIDTYGLDATVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKVRQADLLVVAVGKPGFIPGDWIKPGAIVIDVGINRLENGS------LVGDVEFNVAAEKAAFITPVPGGVGPMTIASLLENTL 276          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_SHEAM (Bifunctional protein folD OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=folD PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.521e-48
Identity = 109/235 (46.38%), Postives = 137/235 (58.30%), Query Frame = -3
Query:  169 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAK 873
            KRKAC EVG  S   DLP+  SE +L++ +   N  P + GILVQLPLP HI+  KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L++ +GV   G  AVVVG SNIVG P++L LL A  T T  H  T + E  VR+AD+++ A G+   I G WIKPGA VIDVG N +DD       RLVGDV+F  A +                   LL NTL  A+
Sbjct:   54 KRKACEEVGFLSQSFDLPDTTSEDDLLALIDRCNEDPAIDGILVQLPLPAHIDSSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIRSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEDKVRQADLLVVAVGKPHFIPGDWIKPGAIVIDVGINRLDDG------RLVGDVEFDVAAERAAFITPVPGGVGPMTIASLLENTLYAAE 280          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_BURCA (Bifunctional protein folD OS=Burkholderia cenocepacia (strain AU 1054) GN=folD PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.521e-48
Identity = 112/236 (47.46%), Postives = 147/236 (62.29%), Query Frame = -3
Query:  166 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKR 873
            K KAC + G  S     P  +SEA+L++++ ELN  P +HGILVQLPLP HI+  KV+  I+ EKDVDGFH  N G L M G+ PLF PCTP G +++ +  G+ ++G  AVV+GRSNIVG P++++LL A ATVTI HS T D  +  READIV+AA G+  ++    +KPGA VIDVG N  DD+ K     L GDVDF  A +                  MLL NT++ A+R
Sbjct:   53 KIKACEDNGFFSLKDAYPATLSEADLLARIDELNRDPKIHGILVQLPLPAHIDSHKVIEAIAPEKDVDGFHVANAGAL-MTGK-PLFRPCTPYGVMKMFEAHGIALQGANAVVIGRSNIVGKPMAMMLLDAGATVTICHSKTRDLAAHTREADIVVAAVGKRNILTADMVKPGATVIDVGMNR-DDAGK-----LCGDVDFAGAKEVAGYITPVPGGVGPMTITMLLINTIESAER 280          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_BACHD (Bifunctional protein folD OS=Bacillus halodurans GN=folD PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.521e-48
Identity = 111/235 (47.23%), Postives = 142/235 (60.43%), Query Frame = -3
Query:  169 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAK 873
            K+KAC ++GI S   +LP   SE EL++++  LN  P +HGILVQLPLP+ I+E+ V+  IS  KDVDGFHP+++G++ M G D  FLPCTP G L +L+ + V I GK  VVVGRSNIVG PV  L+L   ATVT  HS T +   I ++ADI+I A G+A  I  S +K GA VIDVG N VD        +L GDVDF    +                  MLL NT+  AK
Sbjct:   53 KQKACEQIGIYSVLKELPASTSEEELLTEIDRLNNDPTIHGILVQLPLPEQISEQAVIERISPAKDVDGFHPISVGRM-MIGEDT-FLPCTPFGVLVMLQEANVEIAGKHVVVVGRSNIVGKPVGQLMLNEHATVTYCHSRTKNLTEITKQADILIVAVGRARFIDASHVKEGAVVIDVGINRVDG-------KLCGDVDFESVREVASHLTPVPGGVGPMTITMLLANTIQAAK 278          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_METFK (Bifunctional protein folD OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=folD PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.293e-48
Identity = 104/201 (51.74%), Postives = 133/201 (66.17%), Query Frame = -3
Query:  271 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDF 873
            KR AC + GI+S   DLP+  SEAEL++ + +LN    V GILVQ PLP HI E+K++  IS  KDVDGFHP NIG+LA+  R P    CTP G ++LL+ +GV + G  AVVVG SN VG P++L LL A  TVT  H HT D ++ +  ADIV+AA G+  +IKG WIKPGA VID+G N + D +      L GDV+F
Sbjct:   54 KRLACDKTGIRSLAYDLPDTTSEAELLALIKQLNQDDAVDGILVQSPLPAHIEEKKIIETISATKDVDGFHPYNIGRLAV--RQPTLRSCTPYGVIKLLQSTGVRLLGLDAVVVGVSNHVGRPMALELLLAGCTVTSCHRHTKDLQASIARADIVVAAVGKPHLIKGEWIKPGAIVIDIGINRLADGS------LCGDVEF 246          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_MESSB (Bifunctional protein folD OS=Mesorhizobium sp. (strain BNC1) GN=folD PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.293e-48
Identity = 111/238 (46.64%), Postives = 140/238 (58.82%), Query Frame = -3
Query:  166 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR-SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG-YRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKR 873
            K +   E G  S    LPE  SE EL+S V  LN  P +HGILVQLPLPK I+ E+++  I+ EKDVDGFH LN+G L         +PCTP G + L++   G  + G  AVV+GRSNIVG P++ LLL A+ATVTI HS T D  +  R ADI++AA G+  M+KG WIKPGA VIDVG + +    K  G  +LVGDV + EA K                  ML+ NTL  A +
Sbjct:   52 KGRKATECGFHSVQHSLPENTSEEELVSLVEALNRDPAIHGILVQLPLPKQIDSERIIHTIAPEKDVDGFHILNVGMLGTGAVTKALVPCTPAGAMLLIEGVRGKDLSGLSAVVIGRSNIVGKPMANLLLAANATVTIAHSRTADLPAACRGADILVAAVGRPEMVKGDWIKPGATVIDVGVSRIPAPEKGEGKMKLVGDVAYAEAEKVAGAITPVPGGVGPMTIAMLMANTLAAASK 289          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_CAMHC (Bifunctional protein folD OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=folD PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.293e-48
Identity = 107/235 (45.53%), Postives = 141/235 (60.00%), Query Frame = -3
Query:  169 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAK 873
            K KAC   GI+S    L    SE+ LI  +  LN   +V GILVQLPLPKHI+E K+L +IS EKDVDGFH +N+G+L + G D  F+PCTP G + L K   + I GK AVV+GRSNIVG P++ LLL A+ATVT+ HS T +   I ++ADI++ A G+   +K   +K GA VIDVG N ++++      +LVGD DF                       MLL+NT+  AK
Sbjct:   51 KEKACKACGIRSLKYTLEANTSESALIDLIQSLNENDEVDGILVQLPLPKHIDENKILEKISCEKDVDGFHAVNVGRL-VSGLDG-FVPCTPCGIMRLFKEYDIEISGKNAVVIGRSNIVGKPMANLLLNANATVTVTHSKTQNLAKITKDADIIVVAIGKPNFLKADMVKNGAVVIDVGINRLENN------KLVGDADFENVANKCSFITPVPGGVGPMTIAMLLKNTIKSAK 277          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_AQUAE (Bifunctional protein folD OS=Aquifex aeolicus GN=folD PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.293e-48
Identity = 109/236 (46.19%), Postives = 143/236 (60.59%), Query Frame = -3
Query:  166 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKR 873
            KRKAC +VGIKS    LP+ VSE +L+  ++ELN   +V GILVQLPLPKHI++ +V+  IS EKDVDGFHP N+GKL  +  D  F+PCTP G   LLK  G+ +KGK   +VG   IVG P+SLL+L  +ATV++ H HT D +   +EADI+I+A G   +IK   IK GA V+DVG + ++        ++VGDVDF    +                   LL NTL   KR
Sbjct:   53 KRKACEKVGIKSLFYHLPQDVSEEKLLGLIYELNMNEEVDGILVQLPLPKHIDQTRVILSISPEKDVDGFHPENMGKLVAQIEDG-FIPCTPLGIDILLKHYGIDVKGKDVTIVGAGFIVGRPLSLLMLWRNATVSVCHIHTKDVKKFTKEADILISATGVPHLIKEDMIKEGAVVVDVGISRLNG-------KIVGDVDFERVKEKASAITPVPGGVGPMTVTALLLNTLKSYKR 280          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_SILST (Bifunctional protein folD OS=Silicibacter sp. (strain TM1040) GN=folD PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 4.301e-48
Identity = 109/241 (45.23%), Postives = 140/241 (58.09%), Query Frame = -3
Query:  154 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG-YRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKRVIEL 873
            K K   EVG+ S++  L    SEA+L++ + +LN   +VHGILVQLPLPKH++E+ V+  I+ EKDVDGFH  N+G L    +    +PCTP GCL +L+    ++ G  AVV+GRSNIVG P++ LLL    TVTI HS T D   +VR ADIV+AA G+  M+ G WIK GA VIDVG N +D   K  G  RLVGDV +  A                     LL NT+    R   L
Sbjct:   54 KGKQTVEVGMNSYEHKLDADTSEADLLALIDQLNKDSEVHGILVQLPLPKHLDEDLVINSIAPEKDVDGFHISNVGLLGTGQKS--MVPCTPLGCLMMLRDYHGSLSGLDAVVIGRSNIVGKPMAQLLLGDSCTVTIAHSRTKDLPEVVRRADIVVAAVGRPEMVPGDWIKEGATVIDVGINRIDAPEKGEGKTRLVGDVHYESAAARAGAITPVPGGVGPMTIACLLANTVTACCRANNL 292          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_SHEON (Bifunctional protein folD OS=Shewanella oneidensis GN=folD PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 4.301e-48
Identity = 109/236 (46.19%), Postives = 138/236 (58.47%), Query Frame = -3
Query:  166 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKR 873
            KRKAC EVG  S   DL    SEAEL++ + +LN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  AVVVG SNIVG P++L LL A  T T  H  T + E  +R+AD+V+ A G+   I G WIKPGA VIDVG N +++ T      LVGDV +  A +                   LL NTL  A++
Sbjct:   54 KRKACEEVGFISRSYDLDTSCSEAELLALIDQLNDDPSIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRQADLVVVAVGKPGFIPGEWIKPGAIVIDVGINRLENGT------LVGDVQYETAAQNASFITPVPGGVGPMTIASLLENTLYAAEQ 281          
The following BLAST results are available for this feature:
BLAST of CX069661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_SHEFN2.521e-4845.89Bifunctional protein folD OS=Shewanella frigidimar... [more]
FOLD_SHEAM2.521e-4846.38Bifunctional protein folD OS=Shewanella amazonensi... [more]
FOLD_BURCA2.521e-4847.46Bifunctional protein folD OS=Burkholderia cenocepa... [more]
FOLD_BACHD2.521e-4847.23Bifunctional protein folD OS=Bacillus halodurans G... [more]
FOLD_METFK3.293e-4851.74Bifunctional protein folD OS=Methylobacillus flage... [more]
FOLD_MESSB3.293e-4846.64Bifunctional protein folD OS=Mesorhizobium sp. (st... [more]
FOLD_CAMHC3.293e-4845.53Bifunctional protein folD OS=Campylobacter hominis... [more]
FOLD_AQUAE3.293e-4846.19Bifunctional protein folD OS=Aquifex aeolicus GN=f... [more]
FOLD_SILST4.301e-4845.23Bifunctional protein folD OS=Silicibacter sp. (str... [more]
FOLD_SHEON4.301e-4846.19Bifunctional protein folD OS=Shewanella oneidensis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12A06_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12A06-B12-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069661 ID=CX069661; Name=CX069661; organism=Citrus sinensis; type=EST; length=878bp
CCCCCCCTTTTTTTTTAACTCATGAACCATCTTCACATGTATTATAAATT
ATTAACCATGATAAATAAAAATGTTTTCAAACAAAACCAAAGGAGAATGA
GTACCGTCTCATGAATTACAATGAAGTCAAGAACAAAGACGAGGGCAGTT
TTACAGCTCGATCACACGCTTTGCACCATCCAAGGTATTCCTGAGTAGCA
TAGCAACAGTCATTGGGCCCACACCACCTGGAACAGGAGTTACACATCCA
GCTACTTTACACGCTTCATGGAAATCCACATCTCCCACTAACCTATAGCC
TGACTTCTTGGTCGAGTCATCGACAGCATTTGTTCCAACATCAATAACAG
CAGCACCAGGCTTGATCCAACTTCCCTTGATCATCATTGCTTGTCCGGCT
GCAGCAATAACAATGTCAGCTTCACGAACGATACTTTCAGGATCAGGGGT
ATGTGAATGGACTATGGTTACAGTGGCATCAGCTTTCAGCAGCAGCAATG
AAACTGGGAGTCCAACAATGTTACTTCGACCCACCACAACAGCCCTTTTA
CCCTTTATAGTAACACCACTTCGTTTCAGAAGTTCAAGGCATCCCTTGGG
CGTGCAAGGAAGGAAGAGGGGGTCTCTGCCTTTCATTGCGAGCTTGCCAA
TGTTCAAAGGATGAAAGCCATCAACATCCTTCTCAAGGCTTATCTCACCT
AAAACTTTCTCTTCATTTATATGCTTCGGCAATGGAAGTTGAACCAATAT
ACCATGTACATCAGGCATTGCGTTAAGCTCGTGAACCTTGCTGATAAGCT
CGGCCTCGGAGACTTGCTCGGGGAGGTCTATGTCAAAAGACTTAATCCCA
ACTTCAGCACAAGCCTTTCTCTTCATGC
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