CX069661

Overview
NameCX069661
Unique NameCX069661
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_CHLT3 (Bifunctional protein folD OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=folD PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.016e-54
Identity = 114/235 (48.51%), Postives = 150/235 (63.83%), Query Frame = -3
Query:  181 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK----ADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTL 873
            K K+C E+G+ S  I+LP   S+ EL+ K+ +LN  P+VHGILVQ PLPKHI+E  V   I+ EKDVDGFHP N+G+L +   D  F+ CTP G +E+LKR  +  KGK  V+VGRSNIVG P++ L+++     + TVT+ HS TPD  +  ++ADI+IAA G+A  I G  IK GA VIDVG N ++ +  KSGYRLVGDVDF  A +                  MLL NT+
Sbjct:   52 KAKSCNEIGMASEVIELPASTSQEELLKKIADLNHNPNVHGILVQQPLPKHIDEFAVTLAIAPEKDVDGFHPENVGRLVLGHLDKCFVSCTPFGIIEILKRYNIETKGKHCVIVGRSNIVGKPMANLMVQKLAYMNCTVTVCHSATPDIATYTKQADILIAAIGKARFITGDMIKAGAVVIDVGINRIEATNTKSGYRLVGDVDFEAASQKASAITPVPGGVGPMTISMLLANTM 286          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_GEOKA (Bifunctional protein folD OS=Geobacillus kaustophilus GN=folD PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.168e-53
Identity = 116/237 (48.95%), Postives = 149/237 (62.87%), Query Frame = -3
Query:  163 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKRV 873
            K+KACAEVGI+SF    P  + E  L++K+ ELN  P VHGILVQLPLP HI E  V+  I+ EKDVDGFHP+N+GK+ +  R   FLPCTP G L +++ +G+ I GK  VVVGRSNIVG PV  L L+  ATVT  HS TPD  +I R+ADI+I A G+A +I    IKPGA VIDVG N +++       +L GDVDF    +                  MLL NT++ A+++
Sbjct:   53 KQKACAEVGIRSFLYTFPAAIDEETLLAKIRELNVDPAVHGILVQLPLPDHICEWSVIETIAPEKDVDGFHPINVGKMMIGQR--AFLPCTPHGILVMVQSAGIDIAGKHVVVVGRSNIVGKPVGQLFLREHATVTYTHSKTPDLAAITRQADILIVAVGKARLIGPEHIKPGAVVIDVGVNRLENG------KLCGDVDFDAVKEVAGYITPVPGGVGPMTITMLLHNTIEAARQL 281          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_PARL1 (Bifunctional protein folD OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=folD PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.526e-53
Identity = 113/234 (48.29%), Postives = 147/234 (62.82%), Query Frame = -3
Query:  166 ACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG-YRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKR 864
            A  E G+ SF+  LP + SEA++++KV ELNA P VHG LVQ P+P HI+++ V+  I   KD DG HPLN G+LA     P  +P TP+GC+ + KR+G  + GK AV++GRSN+VG PV+ LLLK + TVTI HS + D  SI R+ADI++AA G+  M++G W+KPGA VIDVG N V    K  G  RLVGDV F EA +                   LLRNT+  A R
Sbjct:   57 ATTEAGMNSFEFKLPAETSEADVLAKVRELNADPAVHGFLVQFPVPNHISQQAVIDAIDPVKDADGLHPLNAGRLA--SGLPAMVPATPEGCVIMAKRAGGDLSGKHAVIIGRSNLVGKPVAQLLLKENCTVTIAHSRSRDLPSIARQADILVAAVGRPGMVRGDWVKPGAVVIDVGINRVPAPEKGEGKTRLVGDVLFDEAAEVAGAITPVPGGVGLMTVACLLRNTVIAACR 288          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_CHLPB (Bifunctional protein folD OS=Chlorobium phaeobacteroides (strain BS1) GN=folD PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.603e-53
Identity = 115/241 (47.72%), Postives = 148/241 (61.41%), Query Frame = -3
Query:  163 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL----KADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKRV 873
            K K+C E+G+ S  I+LP + +EAEL++ +  LN   DVHGILVQ PLP HI++  V   I   KDVDGFHP N+G++ +   D  F+ CTP G LEL  R  +  KGK  VV+GRSNIVG P++ L+L    +++ TVTI HS T +   I R+ADIVIAA G+   +    IKPGA VIDVG N V+D ++KSGYRLVGDVD+    K                  MLL+NTL    RV
Sbjct:   52 KSKSCKEIGMNSTVIELPAETTEAELLAGIEALNNDNDVHGILVQQPLPAHIDDYAVTMAILPSKDVDGFHPENVGQMVLGNLDKCFISCTPYGILELFSRYSIETKGKHCVVIGRSNIVGKPMANLMLQKLKESNCTVTICHSATSNMPEITRQADIVIAAIGRPEYVTEDMIKPGAVVIDVGINRVEDPSRKSGYRLVGDVDYENVNKKASAITPVPGGVGPMTIAMLLKNTLQSFMRV 292          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_PROA2 (Bifunctional protein folD OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=folD PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 4.440e-53
Identity = 111/240 (46.25%), Postives = 146/240 (60.83%), Query Frame = -3
Query:  166 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL----KADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKR 873
            K K+C E G+ S  I+LP + ++ EL+ K+  LN  PDVHGILVQ PLP HI E  V   I   KDVDGFHP N+G++ +   D  F+ CTP G LELL+R  +  +GK  VVVGRSNIVG P++ L+L    + + TVT+ HS T +   + R+ADI+IAA G+A  I    +KPGA VIDVG N ++D ++KSG+RL GDVDF    +                  MLL+NTL    R
Sbjct:   52 KAKSCKETGMNSTVIELPAETTQEELLGKIEALNQDPDVHGILVQQPLPSHIEEYAVTMAIDPAKDVDGFHPENVGQMVLGNLDKCFISCTPFGILELLRRYDIETRGKHCVVVGRSNIVGKPMANLMLQKLRETNCTVTVCHSATQNMPELTRQADILIAAIGRANFITREMVKPGAVVIDVGINRIEDPSRKSGFRLAGDVDFDNVAEMASAITPVPGGVGPMTIAMLLKNTLQSFAR 291          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_MAGSA (Bifunctional protein folD OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=folD PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 4.440e-53
Identity = 120/242 (49.59%), Postives = 147/242 (60.74%), Query Frame = -3
Query:  154 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVD--DSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKRVIEL 873
            K K   E G++SF+  LP    E  L+  +  LN  P+VHGILVQLP+PKHI+ +KV+  I   KDVDGFHP+N+G+LA  G     +PCTP G L LLK +   + G  AVV+GRSNIVG P++ LL+K   TVT+ HS T D   +VR ADIVIAA G+  MIKG WIKPGA VIDVG N ++  D TKK    LVGDVDF  A K                   LLRNTL    R+ +L
Sbjct:   55 KGKRTVETGMRSFEHKLPADTPEDALLLLIESLNKDPEVHGILVQLPVPKHIDTQKVIEAIDPAKDVDGFHPVNVGRLAAGG--DALVPCTPLGSLLLLKDTLGKLGGLDAVVIGRSNIVGKPMAQLLIKESCTVTVAHSQTKDLPGVVRRADIVIAAVGRPEMIKGDWIKPGATVIDVGINRIELPDGTKK----LVGDVDFASAVKVAGAITPVPGGVGPMTIACLLRNTLVACARLHKL 290          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_CLOCE (Bifunctional protein folD OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=folD PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.799e-53
Identity = 110/206 (53.40%), Postives = 141/206 (68.45%), Query Frame = -3
Query:  256 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACK 873
            K+  C E+GIKSF+  LPE  SE EL+  +  LN    V+GILVQLP+PKHINEEKV+  IS +KD D FHP+N+GKL M G+ P FLPCTP G +ELL+ +G+ I GK  VVVGRSNIVG P ++LLL  +ATVTI HS T + E + R AD+++ A G++  IK  ++KPGA VIDVG +   D       +LVGDV F E  +
Sbjct:   53 KKNDCTEIGIKSFEYALPESTSEEELLDLIETLNNDASVNGILVQLPIPKHINEEKVIAAISPDKDADCFHPMNVGKL-MIGK-PEFLPCTPAGVVELLEENGIEISGKNCVVVGRSNIVGKPQAILLLAKNATVTICHSKTANIEEVCRSADVLVVAIGKSEFIKPEFVKPGAVVIDVGVSRGADG------KLVGDVQFAEVAE 250          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_PORGI (Bifunctional protein folD OS=Porphyromonas gingivalis GN=folD PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 9.891e-53
Identity = 113/239 (47.28%), Postives = 147/239 (61.51%), Query Frame = -3
Query:  169 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK----ADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAK 873
            K KAC EVG  S  I   + V+E EL++ VH LN  P V G +VQLPLPKHI+E+K++  +   KDVDGFHP+N+G+L++    P F+  TPKG +ELL+R  +  +GK  VV+GRSNIVG PVS LLL+     D T+TI HS TP+ + +   ADI+IAA GQ   +    +KPGA V+DVGT  V DST+KSG+RL GDV F E                      L+ NTL  +K
Sbjct:   56 KVKACEEVGFTSSLIRYEDDVTEEELLACVHRLNQDPTVDGFIVQLPLPKHIDEQKIIEAVDPRKDVDGFHPINVGRLSI--GLPGFVSATPKGIVELLRRYNIPTRGKHCVVLGRSNIVGKPVSQLLLQKGEPGDCTITICHSRTPNIKEVCLTADIIIAALGQPEFLTADMVKPGAVVVDVGTTLVPDSTRKSGFRLTGDVKFDEVAPKCSYITPVPGGVGPMTIVSLMSNTLLASK 292          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD2_GEOSL (Bifunctional protein folD 2 OS=Geobacter sulfurreducens GN=folD2 PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 9.891e-53
Identity = 118/236 (50.00%), Postives = 149/236 (63.14%), Query Frame = -3
Query:  169 MKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAK 876
            MK  AC ++G+ S  I  P + +E EL++ ++ELN  P +HGILVQLPLP  IN ++VL  IS  KDVDGFHP N+G+L + G+ P F PCTP G + +L+ +GV + GK  VVVGRSNIVG PV+L+ L+ +ATVTI HS T D    VR AD+VIAA G   MIKG WIK GA VIDVG N V +       +LVGDV+F  A +                  MLL NTL+ AK
Sbjct:   51 MKGDACNKLGMHSVKITRPAETTEEELLALINELNNDPAIHGILVQLPLPPQINADRVLEAISPAKDVDGFHPYNVGRL-VTGK-PTFQPCTPYGVMVMLQEAGVDLAGKEVVVVGRSNIVGKPVALMCLQRNATVTICHSKTRDLPGRVRAADVVIAAVGVPEMIKGDWIKEGAVVIDVGVNRVGEK------KLVGDVEFAAAAERASAITPVPGGVGPMTITMLLHNTLEAAK 278          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_OCHA4 (Bifunctional protein folD OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=folD PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.687e-52
Identity = 116/238 (48.74%), Postives = 145/238 (60.92%), Query Frame = -3
Query:  166 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR-SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG-YRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKR 873
            K K   E G  S   DLPE  SE EL+  +  LN  P +HGILVQLPLPKHI+  +V+  IS +KDVDGFH +N+GKL     +  F+PCTP G + +++R  G  + G  AVV+GRSNIVG P+  LLL A+ATVT+ HS T D  +I R ADI++AA G+  M+KG W+KPGA VIDVG N +    +  G  RLVGDVDF EA K                  ML+ NTL  A R
Sbjct:   53 KSKKAKECGFHSVQHDLPETASEQELLDLIESLNNDPAIHGILVQLPLPKHIDSGRVIQTISPDKDVDGFHFINVGKLGTGEVETAFVPCTPAGAMIMIERIHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARTADILVAAVGRPQMVKGDWVKPGATVIDVGINRIPAPERGEGRTRLVGDVDFVEAEKVAGAITPVPGGVGPMTIAMLMANTLTAACR 290          
The following BLAST results are available for this feature:
BLAST of CX069661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_CHLT34.016e-5448.51Bifunctional protein folD OS=Chloroherpeton thalas... [more]
FOLD_GEOKA1.168e-5348.95Bifunctional protein folD OS=Geobacillus kaustophi... [more]
FOLD_PARL11.526e-5348.29Bifunctional protein folD OS=Parvibaculum lavament... [more]
FOLD_CHLPB2.603e-5347.72Bifunctional protein folD OS=Chlorobium phaeobacte... [more]
FOLD_PROA24.440e-5346.25Bifunctional protein folD OS=Prosthecochloris aest... [more]
FOLD_MAGSA4.440e-5349.59Bifunctional protein folD OS=Magnetospirillum magn... [more]
FOLD_CLOCE5.799e-5353.40Bifunctional protein folD OS=Clostridium celluloly... [more]
FOLD_PORGI9.891e-5347.28Bifunctional protein folD OS=Porphyromonas gingiva... [more]
FOLD2_GEOSL9.891e-5350.00Bifunctional protein folD 2 OS=Geobacter sulfurred... [more]
FOLD_OCHA41.687e-5248.74Bifunctional protein folD OS=Ochrobactrum anthropi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12A06_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12A06-B12-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069661 ID=CX069661; Name=CX069661; organism=Citrus sinensis; type=EST; length=878bp
CCCCCCCTTTTTTTTTAACTCATGAACCATCTTCACATGTATTATAAATT
ATTAACCATGATAAATAAAAATGTTTTCAAACAAAACCAAAGGAGAATGA
GTACCGTCTCATGAATTACAATGAAGTCAAGAACAAAGACGAGGGCAGTT
TTACAGCTCGATCACACGCTTTGCACCATCCAAGGTATTCCTGAGTAGCA
TAGCAACAGTCATTGGGCCCACACCACCTGGAACAGGAGTTACACATCCA
GCTACTTTACACGCTTCATGGAAATCCACATCTCCCACTAACCTATAGCC
TGACTTCTTGGTCGAGTCATCGACAGCATTTGTTCCAACATCAATAACAG
CAGCACCAGGCTTGATCCAACTTCCCTTGATCATCATTGCTTGTCCGGCT
GCAGCAATAACAATGTCAGCTTCACGAACGATACTTTCAGGATCAGGGGT
ATGTGAATGGACTATGGTTACAGTGGCATCAGCTTTCAGCAGCAGCAATG
AAACTGGGAGTCCAACAATGTTACTTCGACCCACCACAACAGCCCTTTTA
CCCTTTATAGTAACACCACTTCGTTTCAGAAGTTCAAGGCATCCCTTGGG
CGTGCAAGGAAGGAAGAGGGGGTCTCTGCCTTTCATTGCGAGCTTGCCAA
TGTTCAAAGGATGAAAGCCATCAACATCCTTCTCAAGGCTTATCTCACCT
AAAACTTTCTCTTCATTTATATGCTTCGGCAATGGAAGTTGAACCAATAT
ACCATGTACATCAGGCATTGCGTTAAGCTCGTGAACCTTGCTGATAAGCT
CGGCCTCGGAGACTTGCTCGGGGAGGTCTATGTCAAAAGACTTAATCCCA
ACTTCAGCACAAGCCTTTCTCTTCATGC
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