CX069661

Overview
NameCX069661
Unique NameCX069661
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_ANADF (Bifunctional protein folD OS=Anaeromyxobacter sp. (strain Fw109-5) GN=folD PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.687e-52
Identity = 118/235 (50.21%), Postives = 148/235 (62.98%), Query Frame = -3
Query:  169 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAK 873
            KRK C EVGI+S +  LP  VS+A+L++ V  LNA P VHGILVQLPLPKH++E  VL  I   KD DGFHP N+G L++ G      PCTP G + LL  + V  KGKRA+VVGRSNIVG P++ +LL+  ATVTI HS T D    V  ADIV+AA G+A +I+G WI+ GA VIDVG N +DD       RLVGDV++  A +                  MLL NT++ A+
Sbjct:   50 KRKDCEEVGIRSDEHHLPATVSQADLLALVARLNADPTVHGILVQLPLPKHLDERAVLDAIDPRKDSDGFHPFNVGALSI-GIPGTPRPCTPAGVMRLLDEARVDPKGKRAIVVGRSNIVGKPMAAMLLERHATVTIAHSRTQDLAGEVARADIVVAAIGKAELIRGEWIREGAVVIDVGMNRLDDG------RLVGDVEYAAAARRASAITPVPGGVGPMTRAMLLVNTIELAR 277          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_CYTH3 (Bifunctional protein folD OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=folD PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.204e-52
Identity = 108/238 (45.38%), Postives = 153/238 (64.29%), Query Frame = -3
Query:  172 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK----ADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGA 873
            K KAC  VG KS  + LPE ++EA+L++KV E+NA  D+ G +VQLPLPKHI+E+KV   IS +KDVDGFHP ++G++ +    P +LP TP G ++LL+R+G+   GK  VV+GRS+IVG P+S+L+ +     +ATVT+VHS T + + +  +ADI+I A G+   +    +K GA V+DVG + +DD+TKKSG+RL+GDV F E                      LL NTL  A
Sbjct:   52 KVKACELVGFKSTLVKLPETITEADLLAKVAEINADKDIDGYIVQLPLPKHIDEQKVTEAISPDKDVDGFHPTSLGRMVL--NLPTYLPATPYGIMQLLERNGIETSGKHCVVMGRSHIVGSPMSILMARNTNPGNATVTMVHSRTKNLKELTLQADILIVAIGKPEFVTADMVKEGAVVVDVGIHRIDDATKKSGFRLLGDVKFDEVAPKTSYISPVPGGVGPMTIASLLMNTLQAA 287          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_CHLPD (Bifunctional protein folD OS=Chlorobium phaeobacteroides (strain DSM 266) GN=folD PE=3 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 2.204e-52
Identity = 116/244 (47.54%), Postives = 146/244 (59.84%), Query Frame = -3
Query:  154 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPV-SLLLLKADA---TVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKRVIEL 873
            K K+C E+G+ S  I++P    +  L+  + ELN  P VHGILVQ PLPK I+E  V   I   KDVDGFHP N+G+L M   D  F+ CTP G LELL R  +  KGK  VVVGRSNIVG P+ +L++ K DA   TVT+ HS T D  S  ++ADI+IAA G+A  I    +KPGA VIDVG N ++D + KSGYRLVGDVD+                       MLL+NTL   +R+  L
Sbjct:   52 KAKSCLEIGMHSTVIEMPHDTPQETLLQAIRELNQDPAVHGILVQQPLPKQIDEFAVTLAIDPSKDVDGFHPENLGRLVMGHLDKCFVSCTPYGILELLDRYNIETKGKHCVVVGRSNIVGKPMANLMMQKLDATNCTVTVCHSATRDIPSFTKQADILIAALGKARFITADMVKPGAVVIDVGINRIEDPSTKSGYRLVGDVDYDGVAALASAITPVPGGVGPMTIAMLLKNTLQSFRRINNL 295          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_ANADE (Bifunctional protein folD OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=folD PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.204e-52
Identity = 117/237 (49.37%), Postives = 150/237 (63.29%), Query Frame = -3
Query:  163 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKRV 873
            KRK C EVGI S +  LP   ++AEL++ +  LNA P VHGILVQLPLPKH++E  VL  IS  KD DGFHP N+G L++ G   +  PCTP G + +L  + V  KGKRA+VVGRSNIVG P++++LL+  ATVTI HS T D    V  ADI++AA G+A ++KG+W+K GA VIDVG N + D       +LVGDV+F  A                    MLL NT++ AKRV
Sbjct:   51 KRKDCEEVGITSVEHHLPVTTTQAELLALIARLNADPAVHGILVQLPLPKHVDERAVLDAISPAKDADGFHPFNVGALSI-GIAGVPRPCTPAGVMRMLDEARVDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLAGEVGRADILVAAIGKAELVKGAWVKEGAVVIDVGMNRLADG------KLVGDVEFAAAAARASAITPVPGGVGPMTRAMLLVNTVELAKRV 280          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_NOVAD (Bifunctional protein folD OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=folD PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.878e-52
Identity = 114/236 (48.31%), Postives = 149/236 (63.14%), Query Frame = -3
Query:  166 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKR 873
            K K+  E G+ SF+  LP   +EA+L++ V +LNA P V GILVQLPLP+H++E+KV+  I+ +KDVDGFH +N G+LA+    P F+PCTP GCL LLK     + G  AVV+GRSNIVG P++ LL+    TVT+ HS T +   +VR ADIV+AA G+  M+KG WIKPGA VIDVG N V    ++   RLVGDVD+  A +                  +LLRN L  A R
Sbjct:   54 KGKSTLEAGMASFEHKLPADTAEADLLAVVEQLNADPAVDGILVQLPLPRHMDEQKVIAAINPDKDVDGFHVINAGRLAVG--QPGFVPCTPLGCLMLLKDRLGDLSGLDAVVIGRSNIVGKPMAQLLIAESCTVTVAHSRTKNLPEVVRRADIVVAAVGRPEMVKGDWIKPGATVIDVGINRV-PGKEEGKTRLVGDVDYASAAEVASAITPVPGGVGPMTIAVLLRNALVAAYR 286          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_CHLL2 (Bifunctional protein folD OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=folD PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.878e-52
Identity = 121/244 (49.59%), Postives = 145/244 (59.43%), Query Frame = -3
Query:  154 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPV-SLLLLKADA---TVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKRVIEL 873
            K K+C E G+ S  I++    SE  L+S++ ELN  PDVHGILVQ PLPK I+E  V   I   KDVDGFHP N+G+L M   D  F+ CTP G LELL R  +  KGK  VVVGRSNIVG P+ +L+L K DA   TVTI HS T D  S  R+ADI+IAA G+A  I    +KPGA VIDVG N +DD + KSG RL GDVD+                       MLL+NTL   +R   L
Sbjct:   52 KAKSCKETGMHSSVIEMDASTSEEALLSRIRELNDDPDVHGILVQQPLPKQIDEFAVTLAIDPAKDVDGFHPENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQKLDATNCTVTICHSATKDIPSYTRQADILIAAIGKAGFITADMVKPGAVVIDVGINRIDDPSTKSGSRLAGDVDYEGVSAIASAMTPVPGGVGPMTIAMLLKNTLQSFERANNL 295          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: C1TC_SPOFR (C-1-tetrahydrofolate synthase, cytoplasmic OS=Spodoptera frugiperda PE=2 SV=3)

HSP 1 Score: 204.527 bits (519), Expect = 6.411e-52
Identity = 110/242 (45.45%), Postives = 150/242 (61.98%), Query Frame = -3
Query:  157 MKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPK--HINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKRVIE 876
            MK +A   +GI +  I LP  ++E EL++ +  LN  P VHGI+VQ+PL     I+   +   +S +KDVDG + +N G++ + G    F+PCTP GC+EL+KR+GVTI GK  VV+GRS IVG PVS LL    ATVT+ HS T +   I + ADI++ A G+  M++GSWIKPGA VID G N + D TKKSG RLVGDV + EA +                  ML+RNT+  A+R ++
Sbjct:   54 MKLRAAENIGITAEHIQLPRDITETELLANITSLNESPYVHGIIVQMPLDSVHPIDSHAITDAVSPDKDVDGLNTINEGRVRV-GDLSGFIPCTPAGCVELIKRTGVTIAGKNVVVLGRSRIVGTPVSELLKWEHATVTVCHSKTKNLSEITKTADILVVAIGRGEMVRGSWIKPGAVVIDCGINPISDPTKKSGQRLVGDVAYEEAVQVASHVTPVPGGVGPMTVAMLMRNTVQAARRQLD 294          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_AZOC5 (Bifunctional protein folD OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=folD PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.374e-52
Identity = 117/236 (49.58%), Postives = 147/236 (62.29%), Query Frame = -3
Query:  166 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKR 873
            K    AE G+ SF+  LP   +EA+L++ V +LNA P V+GILVQLPLP H++  KVL  I   KDVDGFH +N G+LA+ G D L +PCTP GC+ LLK     + G  AVVVGRSNIVG P + LLL+ D TVTI HS T D   + R+ADI++AA G+  M++G WIKPGA VIDVG N V  +  K+  RLVGDV + EA                     LL+NTL  A+R
Sbjct:   55 KAAQTAEAGMASFEYKLPADTAEADLLALVEKLNADPAVNGILVQLPLPAHLDSMKVLAAIDPAKDVDGFHVVNAGRLAV-GLDAL-VPCTPLGCVMLLKHHLGNLSGLNAVVVGRSNIVGKPAAQLLLREDCTVTIAHSRTRDLPGMCRQADILVAAVGRPEMVRGDWIKPGATVIDVGINRVPKADGKT--RLVGDVAYEEALGVAGLITPVPGGVGPMTIACLLQNTLTAARR 286          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD3_SPHWW (Bifunctional protein folD 3 OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=folD3 PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.374e-52
Identity = 117/236 (49.58%), Postives = 145/236 (61.44%), Query Frame = -3
Query:  166 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKR 873
            K KA  E G++SF+  LP   SE EL++ V  LNA   V GILVQLPLP HI+E+KV+  I  +KDVDGFH +N G+LA+   +  ++PCTP GCL LLK     + G  AVV+GRSNIVG P++ LLL  + TVTI HS T D   +VR ADIV+AA G+  M++G WI+PGA VIDVG N V    +    RLVGDV F EA                    +LLRNTL  A R
Sbjct:   60 KHKATVEAGMESFEHRLPATASETELLALVERLNADDRVDGILVQLPLPPHIDEKKVIATIDPDKDVDGFHVVNAGRLAVG--EAGYVPCTPLGCLMLLKDRRGDLSGLEAVVIGRSNIVGKPMAALLLAENCTVTIAHSRTRDLAEVVRRADIVVAAVGRPEMVRGDWIRPGATVIDVGINRV-PGAEPGKTRLVGDVAFAEAAAVAGAITPVPGGVGPMTIAVLLRNTLVAAHR 292          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_NEIMB (Bifunctional protein folD OS=Neisseria meningitidis serogroup B GN=folD PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.865e-51
Identity = 114/234 (48.72%), Postives = 143/234 (61.11%), Query Frame = -3
Query:  172 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGA 873
            K+ AC + GIKS   +LPE  S+ EL++ V  LNA  +V GILVQLPLPKH++ + VL  IS +KDVDGFHP N+G+LA+K   PL  PCTPKG + LL+  G+  KGK+AVVVG SNIVG P +L LL A ATVT+ HS T +    V  ADI++   G    +KG WIKPGA VIDVG N +DD +      L GDV+F  A +                   L+ NTL  A
Sbjct:   54 KKTACQKCGIKSLSYELPESTSQEELLALVDRLNADSEVDGILVQLPLPKHLDSQAVLERISPDKDVDGFHPYNVGRLAVKM--PLMRPCTPKGVMTLLEAYGIDPKGKKAVVVGASNIVGRPQALELLLARATVTVCHSATENLTDEVAGADILVVGVGIPNFVKGEWIKPGAVVIDVGINRLDDGS------LCGDVEFETAKERAAMITPVPGGVGPMTIATLMENTLHAA 279          
The following BLAST results are available for this feature:
BLAST of CX069661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_ANADF1.687e-5250.21Bifunctional protein folD OS=Anaeromyxobacter sp. ... [more]
FOLD_CYTH32.204e-5245.38Bifunctional protein folD OS=Cytophaga hutchinsoni... [more]
FOLD_CHLPD2.204e-5247.54Bifunctional protein folD OS=Chlorobium phaeobacte... [more]
FOLD_ANADE2.204e-5249.37Bifunctional protein folD OS=Anaeromyxobacter deha... [more]
FOLD_NOVAD2.878e-5248.31Bifunctional protein folD OS=Novosphingobium aroma... [more]
FOLD_CHLL22.878e-5249.59Bifunctional protein folD OS=Chlorobium limicola (... [more]
C1TC_SPOFR6.411e-5245.45C-1-tetrahydrofolate synthase, cytoplasmic OS=Spod... [more]
FOLD_AZOC58.374e-5249.58Bifunctional protein folD OS=Azorhizobium caulinod... [more]
FOLD3_SPHWW8.374e-5249.58Bifunctional protein folD 3 OS=Sphingomonas wittic... [more]
FOLD_NEIMB1.865e-5148.72Bifunctional protein folD OS=Neisseria meningitidi... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_12A06_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12A06-B12-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069661 ID=CX069661; Name=CX069661; organism=Citrus sinensis; type=EST; length=878bp
CCCCCCCTTTTTTTTTAACTCATGAACCATCTTCACATGTATTATAAATT
ATTAACCATGATAAATAAAAATGTTTTCAAACAAAACCAAAGGAGAATGA
GTACCGTCTCATGAATTACAATGAAGTCAAGAACAAAGACGAGGGCAGTT
TTACAGCTCGATCACACGCTTTGCACCATCCAAGGTATTCCTGAGTAGCA
TAGCAACAGTCATTGGGCCCACACCACCTGGAACAGGAGTTACACATCCA
GCTACTTTACACGCTTCATGGAAATCCACATCTCCCACTAACCTATAGCC
TGACTTCTTGGTCGAGTCATCGACAGCATTTGTTCCAACATCAATAACAG
CAGCACCAGGCTTGATCCAACTTCCCTTGATCATCATTGCTTGTCCGGCT
GCAGCAATAACAATGTCAGCTTCACGAACGATACTTTCAGGATCAGGGGT
ATGTGAATGGACTATGGTTACAGTGGCATCAGCTTTCAGCAGCAGCAATG
AAACTGGGAGTCCAACAATGTTACTTCGACCCACCACAACAGCCCTTTTA
CCCTTTATAGTAACACCACTTCGTTTCAGAAGTTCAAGGCATCCCTTGGG
CGTGCAAGGAAGGAAGAGGGGGTCTCTGCCTTTCATTGCGAGCTTGCCAA
TGTTCAAAGGATGAAAGCCATCAACATCCTTCTCAAGGCTTATCTCACCT
AAAACTTTCTCTTCATTTATATGCTTCGGCAATGGAAGTTGAACCAATAT
ACCATGTACATCAGGCATTGCGTTAAGCTCGTGAACCTTGCTGATAAGCT
CGGCCTCGGAGACTTGCTCGGGGAGGTCTATGTCAAAAGACTTAATCCCA
ACTTCAGCACAAGCCTTTCTCTTCATGC
back to top