CX069661

Overview
NameCX069661
Unique NameCX069661
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_NEIMA (Bifunctional protein folD OS=Neisseria meningitidis serogroup A GN=folD PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.865e-51
Identity = 114/234 (48.72%), Postives = 143/234 (61.11%), Query Frame = -3
Query:  172 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGA 873
            K+ AC + GIKS   +LPE  S+ EL++ V  LNA  +V GILVQLPLPKH++ + VL  IS +KDVDGFHP N+G+LA+K   PL  PCTPKG + LL+  G+  KGK+AVVVG SNIVG P +L LL A ATVT+ HS T +    V  ADI++   G    +KG WIKPGA VIDVG N +DD +      L GDV+F  A +                   L+ NTL  A
Sbjct:   54 KKTACQKCGIKSLSYELPESTSQEELLALVDRLNADSEVDGILVQLPLPKHLDSQAVLERISPDKDVDGFHPYNVGRLAVKM--PLMRPCTPKGVMTLLEAYGIDPKGKKAVVVGASNIVGRPQALELLLARATVTVCHSATENLTDEVAGADILVVGVGIPNFVKGEWIKPGAVVIDVGINRLDDGS------LCGDVEFETAKERAAMITPVPGGVGPMTIATLMENTLHAA 279          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_NEIM0 (Bifunctional protein folD OS=Neisseria meningitidis serogroup C (strain 053442) GN=folD PE=3 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 1.865e-51
Identity = 114/234 (48.72%), Postives = 143/234 (61.11%), Query Frame = -3
Query:  172 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGA 873
            K+ AC + GIKS   +LPE  S+ EL++ V  LNA  +V GILVQLPLPKH++ + VL  IS +KDVDGFHP N+G+LA+K   PL  PCTPKG + LL+  G+  KGK+AVVVG SNIVG P +L LL A ATVT+ HS T +    V  ADI++   G    +KG WIKPGA VIDVG N +DD +      L GDV+F  A +                   L+ NTL  A
Sbjct:   54 KKTACQKCGIKSLSYELPESTSQEELLALVDRLNADSEVDGILVQLPLPKHLDSQAVLERISPDKDVDGFHPYNVGRLAVKM--PLMRPCTPKGVMTLLEAYGIDPKGKKAVVVGASNIVGRPQALELLLARATVTVCHSATENLADEVAGADILVVGVGIPNFVKGEWIKPGAVVIDVGINRLDDGS------LCGDVEFETAKERAAMITPVPGGVGPMTIATLMENTLHAA 279          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_NEIG2 (Bifunctional protein folD OS=Neisseria gonorrhoeae (strain NCCP11945) GN=folD PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.865e-51
Identity = 113/234 (48.29%), Postives = 143/234 (61.11%), Query Frame = -3
Query:  172 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGA 873
            K+ AC + GIKS   +LPE  S+ EL++ V  LNA  +V GILVQLPLPKH++ + +L  IS +KDVDGFHP N+G+LA+K   PL  PCTPKG + LL+  G+  KGK+AVVVG SNIVG P +L LL A ATVT+ HS T +    V  ADI++   G    +KG WIKPGA VIDVG N +DD +      L GDV+F  A +                   L+ NTL  A
Sbjct:   54 KKTACQKCGIKSLSYELPESTSQEELLALVDRLNADSEVDGILVQLPLPKHLDSQAILERISPDKDVDGFHPYNVGRLAVKM--PLMRPCTPKGVMTLLEAYGIDPKGKKAVVVGASNIVGRPQALELLLARATVTVCHSATENLADEVAAADILVVGVGIPNFVKGGWIKPGAVVIDVGINRLDDGS------LCGDVEFETAKERAAMITPVPGGVGPMTIATLMENTLHAA 279          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_NEIG1 (Bifunctional protein folD OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=folD PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.865e-51
Identity = 113/234 (48.29%), Postives = 143/234 (61.11%), Query Frame = -3
Query:  172 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGA 873
            K+ AC + GIKS   +LPE  S+ EL++ V  LNA  +V GILVQLPLPKH++ + +L  IS +KDVDGFHP N+G+LA+K   PL  PCTPKG + LL+  G+  KGK+AVVVG SNIVG P +L LL A ATVT+ HS T +    V  ADI++   G    +KG WIKPGA VIDVG N +DD +      L GDV+F  A +                   L+ NTL  A
Sbjct:   54 KKTACQKCGIKSLSYELPESTSQEELLALVDRLNADSEVDGILVQLPLPKHLDSQAILERISPDKDVDGFHPYNVGRLAVKM--PLMRPCTPKGVMTLLEAYGIDPKGKKAVVVGASNIVGRPQALELLLARATVTVCHSATENLADEVAAADILVVGVGIPNFVKGGWIKPGAVVIDVGINRLDDGS------LCGDVEFETAKERAAMITPVPGGVGPMTIATLMENTLHAA 279          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_LACS1 (Bifunctional protein folD OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=folD PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.865e-51
Identity = 114/238 (47.90%), Postives = 146/238 (61.34%), Query Frame = -3
Query:  160 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKRVI 873
            KRK    +GI++ DI LPE V E ELI  + ELN+   VHGILVQLPLPKHINE KV   I  EKDVDGFHPLNIGKL M    PL  PCTP+G +E  K   + + GKR V+VGRSNIVG P++ LL+ +DATVTI HS T +   + ++ADI+I A G+   I  +++K GA VIDVG N  +D       +LVGDV+     K                  ML++ T++ A+R +
Sbjct:   53 KRKTAHALGIEAVDIRLPENVEEDELIRLIDELNSDGTVHGILVQLPLPKHINENKVTHRIIPEKDVDGFHPLNIGKLFMNIPGPL--PCTPRGIMEFFKEYDIPVSGKRVVIVGRSNIVGRPMAALLVNSDATVTIAHSKTKNLAEVTKQADILIVAIGKGEFIDENYVKKGAVVIDVGMNRNNDG------KLVGDVNMESVSKVASYITPVPGGVGPMTIAMLMKQTVELAERSV 282          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_BRUSU (Bifunctional protein folD OS=Brucella suis GN=folD PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.865e-51
Identity = 114/238 (47.90%), Postives = 145/238 (60.92%), Query Frame = -3
Query:  166 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR-SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG-YRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKR 873
            K +   E G  S   DLPE  SE EL++ +  LN  P +HGILVQLPLP HI+  +V+  I+ EKDVDGFH +N+GKL     +  F+PCTP G + +++R  G  + G  AVV+GRSNIVG P+  LLL A+ATVT+ HS T D  +I R ADI++AA G+  M+KG W+KPGA VIDVG N +    +  G  RLVGDVDF EA K                  ML+ NTL  A R
Sbjct:   53 KSRKAKECGFHSVQHDLPETASEQELLNLIEGLNNDPAIHGILVQLPLPGHIDSGRVIQTIAPEKDVDGFHFINVGKLGTGEVETAFVPCTPAGAMIMIERVHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARNADILVAAVGRPQMVKGDWVKPGATVIDVGINRIPAPERGEGKTRLVGDVDFAEAEKVAGAITPVPGGVGPMTIAMLMANTLTAACR 290          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_BRUSI (Bifunctional protein folD OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=folD PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.865e-51
Identity = 114/238 (47.90%), Postives = 145/238 (60.92%), Query Frame = -3
Query:  166 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR-SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG-YRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKR 873
            K +   E G  S   DLPE  SE EL++ +  LN  P +HGILVQLPLP HI+  +V+  I+ EKDVDGFH +N+GKL     +  F+PCTP G + +++R  G  + G  AVV+GRSNIVG P+  LLL A+ATVT+ HS T D  +I R ADI++AA G+  M+KG W+KPGA VIDVG N +    +  G  RLVGDVDF EA K                  ML+ NTL  A R
Sbjct:   53 KSRKAKECGFHSVQHDLPETASEQELLNLIEGLNNDPAIHGILVQLPLPGHIDSGRVIQTIAPEKDVDGFHFINVGKLGTGEVETAFVPCTPAGAMIMIERVHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARNADILVAAVGRPQMVKGDWVKPGATVIDVGINRIPAPERGEGKTRLVGDVDFAEAEKVAGAITPVPGGVGPMTIAMLMANTLTAACR 290          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_BRUO2 (Bifunctional protein folD OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=folD PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.865e-51
Identity = 114/238 (47.90%), Postives = 145/238 (60.92%), Query Frame = -3
Query:  166 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR-SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG-YRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKR 873
            K +   E G  S   DLPE  SE EL++ +  LN  P +HGILVQLPLP HI+  +V+  I+ EKDVDGFH +N+GKL     +  F+PCTP G + +++R  G  + G  AVV+GRSNIVG P+  LLL A+ATVT+ HS T D  +I R ADI++AA G+  M+KG W+KPGA VIDVG N +    +  G  RLVGDVDF EA K                  ML+ NTL  A R
Sbjct:   53 KSRKAKECGFHSVQHDLPETASEQELLNLIEGLNNDPAIHGILVQLPLPGHIDSGRVIQTIAPEKDVDGFHFINVGKLGTGEVETAFVPCTPAGAMIMIERVHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARNADILVAAVGRPQMVKGDWVKPGATVIDVGINRIPAPERGEGKTRLVGDVDFAEAEKVAGAITPVPGGVGPMTIAMLMANTLTAACR 290          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_BRUME (Bifunctional protein folD OS=Brucella melitensis GN=folD PE=3 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 1.865e-51
Identity = 114/238 (47.90%), Postives = 145/238 (60.92%), Query Frame = -3
Query:  166 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR-SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG-YRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKR 873
            K +   E G  S   DLPE  SE EL++ +  LN  P +HGILVQLPLP HI+  +V+  I+ EKDVDGFH +N+GKL     +  F+PCTP G + +++R  G  + G  AVV+GRSNIVG P+  LLL A+ATVT+ HS T D  +I R ADI++AA G+  M+KG W+KPGA VIDVG N +    +  G  RLVGDVDF EA K                  ML+ NTL  A R
Sbjct:   53 KSRKAKECGFHSVQHDLPETASEQELLNLIEGLNNDPAIHGILVQLPLPGHIDSGRVIQTIAPEKDVDGFHFINVGKLGTGEVETAFVPCTPAGAMIMIERVHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARNADILVAAVGRPQMVKGDWVKPGATVIDVGINRIPAPERGEGKTRLVGDVDFAEAEKVAGAITPVPGGVGPMTIAMLMANTLTAACR 290          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_BRUMB (Bifunctional protein folD OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=folD PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.865e-51
Identity = 114/238 (47.90%), Postives = 145/238 (60.92%), Query Frame = -3
Query:  166 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR-SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG-YRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKR 873
            K +   E G  S   DLPE  SE EL++ +  LN  P +HGILVQLPLP HI+  +V+  I+ EKDVDGFH +N+GKL     +  F+PCTP G + +++R  G  + G  AVV+GRSNIVG P+  LLL A+ATVT+ HS T D  +I R ADI++AA G+  M+KG W+KPGA VIDVG N +    +  G  RLVGDVDF EA K                  ML+ NTL  A R
Sbjct:   53 KSRKAKECGFHSVQHDLPETASEQELLNLIEGLNNDPAIHGILVQLPLPGHIDSGRVIQTIAPEKDVDGFHFINVGKLGTGEVETAFVPCTPAGAMIMIERVHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARNADILVAAVGRPQMVKGDWVKPGATVIDVGINRIPAPERGEGKTRLVGDVDFAEAEKVAGAITPVPGGVGPMTIAMLMANTLTAACR 290          
The following BLAST results are available for this feature:
BLAST of CX069661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_NEIMA1.865e-5148.72Bifunctional protein folD OS=Neisseria meningitidi... [more]
FOLD_NEIM01.865e-5148.72Bifunctional protein folD OS=Neisseria meningitidi... [more]
FOLD_NEIG21.865e-5148.29Bifunctional protein folD OS=Neisseria gonorrhoeae... [more]
FOLD_NEIG11.865e-5148.29Bifunctional protein folD OS=Neisseria gonorrhoeae... [more]
FOLD_LACS11.865e-5147.90Bifunctional protein folD OS=Lactobacillus salivar... [more]
FOLD_BRUSU1.865e-5147.90Bifunctional protein folD OS=Brucella suis GN=folD... [more]
FOLD_BRUSI1.865e-5147.90Bifunctional protein folD OS=Brucella suis (strain... [more]
FOLD_BRUO21.865e-5147.90Bifunctional protein folD OS=Brucella ovis (strain... [more]
FOLD_BRUME1.865e-5147.90Bifunctional protein folD OS=Brucella melitensis G... [more]
FOLD_BRUMB1.865e-5147.90Bifunctional protein folD OS=Brucella melitensis b... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12A06_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12A06-B12-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069661 ID=CX069661; Name=CX069661; organism=Citrus sinensis; type=EST; length=878bp
CCCCCCCTTTTTTTTTAACTCATGAACCATCTTCACATGTATTATAAATT
ATTAACCATGATAAATAAAAATGTTTTCAAACAAAACCAAAGGAGAATGA
GTACCGTCTCATGAATTACAATGAAGTCAAGAACAAAGACGAGGGCAGTT
TTACAGCTCGATCACACGCTTTGCACCATCCAAGGTATTCCTGAGTAGCA
TAGCAACAGTCATTGGGCCCACACCACCTGGAACAGGAGTTACACATCCA
GCTACTTTACACGCTTCATGGAAATCCACATCTCCCACTAACCTATAGCC
TGACTTCTTGGTCGAGTCATCGACAGCATTTGTTCCAACATCAATAACAG
CAGCACCAGGCTTGATCCAACTTCCCTTGATCATCATTGCTTGTCCGGCT
GCAGCAATAACAATGTCAGCTTCACGAACGATACTTTCAGGATCAGGGGT
ATGTGAATGGACTATGGTTACAGTGGCATCAGCTTTCAGCAGCAGCAATG
AAACTGGGAGTCCAACAATGTTACTTCGACCCACCACAACAGCCCTTTTA
CCCTTTATAGTAACACCACTTCGTTTCAGAAGTTCAAGGCATCCCTTGGG
CGTGCAAGGAAGGAAGAGGGGGTCTCTGCCTTTCATTGCGAGCTTGCCAA
TGTTCAAAGGATGAAAGCCATCAACATCCTTCTCAAGGCTTATCTCACCT
AAAACTTTCTCTTCATTTATATGCTTCGGCAATGGAAGTTGAACCAATAT
ACCATGTACATCAGGCATTGCGTTAAGCTCGTGAACCTTGCTGATAAGCT
CGGCCTCGGAGACTTGCTCGGGGAGGTCTATGTCAAAAGACTTAATCCCA
ACTTCAGCACAAGCCTTTCTCTTCATGC
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