CX069661

Overview
NameCX069661
Unique NameCX069661
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1505 contig Csv1_Contig1505:206..1068. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_BRUC2 (Bifunctional protein folD OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=folD PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.865e-51
Identity = 114/238 (47.90%), Postives = 145/238 (60.92%), Query Frame = -3
Query:  166 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR-SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG-YRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKR 873
            K +   E G  S   DLPE  SE EL++ +  LN  P +HGILVQLPLP HI+  +V+  I+ EKDVDGFH +N+GKL     +  F+PCTP G + +++R  G  + G  AVV+GRSNIVG P+  LLL A+ATVT+ HS T D  +I R ADI++AA G+  M+KG W+KPGA VIDVG N +    +  G  RLVGDVDF EA K                  ML+ NTL  A R
Sbjct:   53 KSRKAKECGFHSVQHDLPETASEQELLNLIEGLNNDPAIHGILVQLPLPGHIDSGRVIQTIAPEKDVDGFHFINVGKLGTGEVETAFVPCTPAGAMIMIERVHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARNADILVAAVGRPQMVKGDWVKPGATVIDVGINRIPAPERGEGKTRLVGDVDFAEAEKVAGAITPVPGGVGPMTIAMLMANTLTAACR 290          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_BRUAB (Bifunctional protein folD OS=Brucella abortus GN=folD PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.865e-51
Identity = 114/238 (47.90%), Postives = 145/238 (60.92%), Query Frame = -3
Query:  166 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR-SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG-YRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKR 873
            K +   E G  S   DLPE  SE EL++ +  LN  P +HGILVQLPLP HI+  +V+  I+ EKDVDGFH +N+GKL     +  F+PCTP G + +++R  G  + G  AVV+GRSNIVG P+  LLL A+ATVT+ HS T D  +I R ADI++AA G+  M+KG W+KPGA VIDVG N +    +  G  RLVGDVDF EA K                  ML+ NTL  A R
Sbjct:   53 KSRKAKECGFHSVQHDLPETASEQELLNLIEGLNNDPAIHGILVQLPLPGHIDSGRVIQTIAPEKDVDGFHFINVGKLGTGEVETAFVPCTPAGAMIMIERVHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARNADILVAAVGRPQMVKGDWVKPGATVIDVGINRIPAPERGEGKTRLVGDVDFAEAEKVAGAITPVPGGVGPMTIAMLMANTLTAACR 290          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_BRUA2 (Bifunctional protein folD OS=Brucella abortus (strain 2308) GN=folD PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.865e-51
Identity = 114/238 (47.90%), Postives = 145/238 (60.92%), Query Frame = -3
Query:  166 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR-SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG-YRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKR 873
            K +   E G  S   DLPE  SE EL++ +  LN  P +HGILVQLPLP HI+  +V+  I+ EKDVDGFH +N+GKL     +  F+PCTP G + +++R  G  + G  AVV+GRSNIVG P+  LLL A+ATVT+ HS T D  +I R ADI++AA G+  M+KG W+KPGA VIDVG N +    +  G  RLVGDVDF EA K                  ML+ NTL  A R
Sbjct:   53 KSRKAKECGFHSVQHDLPETASEQELLNLIEGLNNDPAIHGILVQLPLPGHIDSGRVIQTIAPEKDVDGFHFINVGKLGTGEVETAFVPCTPAGAMIMIERVHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARNADILVAAVGRPQMVKGDWVKPGATVIDVGINRIPAPERGEGKTRLVGDVDFAEAEKVAGAITPVPGGVGPMTIAMLMANTLTAACR 290          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_BRUA1 (Bifunctional protein folD OS=Brucella abortus (strain S19) GN=folD PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.865e-51
Identity = 114/238 (47.90%), Postives = 145/238 (60.92%), Query Frame = -3
Query:  166 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR-SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG-YRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKR 873
            K +   E G  S   DLPE  SE EL++ +  LN  P +HGILVQLPLP HI+  +V+  I+ EKDVDGFH +N+GKL     +  F+PCTP G + +++R  G  + G  AVV+GRSNIVG P+  LLL A+ATVT+ HS T D  +I R ADI++AA G+  M+KG W+KPGA VIDVG N +    +  G  RLVGDVDF EA K                  ML+ NTL  A R
Sbjct:   53 KSRKAKECGFHSVQHDLPETASEQELLNLIEGLNNDPAIHGILVQLPLPGHIDSGRVIQTIAPEKDVDGFHFINVGKLGTGEVETAFVPCTPAGAMIMIERVHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARNADILVAAVGRPQMVKGDWVKPGATVIDVGINRIPAPERGEGKTRLVGDVDFAEAEKVAGAITPVPGGVGPMTIAMLMANTLTAACR 290          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_BACV8 (Bifunctional protein folD OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=folD PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.865e-51
Identity = 112/242 (46.28%), Postives = 148/242 (61.16%), Query Frame = -3
Query:  160 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK----ADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKRVI 873
            K KAC   G KS  I     V+E EL++KV ELN   DV G +VQLPLPKHI+E+KV+  I   KDVDGFHP+N+G++++    P ++  TP G LELLKR  +  +GK+ VV+GRSNIVG P++ L+++     DATVT+ HS + D     +EADI+IAA GQ   +K   +K GA VIDVGT  V D+TKKSG++L GDV F E                      L++NTL   K+ I
Sbjct:   52 KVKACEVCGFKSSLIRYEADVTEEELLAKVRELNEDADVDGFIVQLPLPKHISEQKVIETIDYRKDVDGFHPINVGRMSI--GLPCYVSATPNGILELLKRYHIETQGKKCVVLGRSNIVGKPMASLMMQKAYPGDATVTVCHSRSKDLVKECQEADIIIAALGQPNFVKAEMVKEGAVVIDVGTTRVPDATKKSGFKLTGDVKFDEVAPKCSYITPVPGGVGPMTIVSLMKNTLLAGKKAI 291          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_BACFR (Bifunctional protein folD OS=Bacteroides fragilis GN=folD PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.436e-51
Identity = 112/242 (46.28%), Postives = 147/242 (60.74%), Query Frame = -3
Query:  160 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK----ADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKRVI 873
            K KAC   G KS  I     V+E EL++KV ELN   DV G +VQLPLPKHI+E+KV+  I   KDVDGFHP+N+G++++    P ++  TP G LELLKR  +   GK+ VV+GRSNIVG P++ L+++     DATVT+ HS + D     READI+IAA GQ   +K   +K GA VIDVGT  V D++KKSG++L GDV F E                      L++NTL   K+ I
Sbjct:   52 KVKACEVCGFKSSLIRYESDVTEDELLAKVRELNEDDDVDGFIVQLPLPKHISEQKVIETIDYRKDVDGFHPINVGRMSI--GLPCYVSATPNGILELLKRYRIETSGKKCVVLGRSNIVGKPMAALMMQKAYPGDATVTVCHSRSKDLVKECREADIIIAALGQPNFVKAEMVKEGAVVIDVGTTRVPDASKKSGFKLTGDVKFDEVSPKCSFITPVPGGVGPMTIVSLMKNTLLAGKKAI 291          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_BACFN (Bifunctional protein folD OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=folD PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.436e-51
Identity = 112/242 (46.28%), Postives = 147/242 (60.74%), Query Frame = -3
Query:  160 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK----ADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKRVI 873
            K KAC   G KS  I     V+E EL++KV ELN   DV G +VQLPLPKHI+E+KV+  I   KDVDGFHP+N+G++++    P ++  TP G LELLKR  +   GK+ VV+GRSNIVG P++ L+++     DATVT+ HS + D     READI+IAA GQ   +K   +K GA VIDVGT  V D++KKSG++L GDV F E                      L++NTL   K+ I
Sbjct:   52 KVKACEVCGFKSSLIRYESDVTEDELLAKVRELNEDDDVDGFIVQLPLPKHISEQKVIETIDYRKDVDGFHPINVGRMSI--GLPCYVSATPNGILELLKRYRIETSGKKCVVLGRSNIVGKPMAALMMQKAYPGDATVTVCHSRSKDLVKECREADIIIAALGQPNFVKAEMVKEGAVVIDVGTTRVPDASKKSGFKLTGDVKFDEVSPKCSFITPVPGGVGPMTIVSLMKNTLLAGKKAI 291          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: C1TC_RAT (C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus GN=Mthfd1 PE=1 SV=3)

HSP 1 Score: 202.601 bits (514), Expect = 2.436e-51
Identity = 113/242 (46.69%), Postives = 148/242 (61.16%), Query Frame = -3
Query:  157 MKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKH--INEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKRVIE 876
            +K KA  E+GIK+  I LP   +E+E++  V  LN    VHG +VQLPL     IN E V+  I+ EKDVDG   +N GKLA       F+PCTPKGCLEL+K +GV I G+ AVVVGRS IVG P+  LLL  +ATVT  HS T D +  V + DI++ A GQ  M+KG WIKPGA VID G N V D TK +G ++VGDV + EA +                  ML+++T++ A+R ++
Sbjct:   55 VKLKAAQEIGIKATHIKLPRTSTESEVLKYVISLNEDATVHGFIVQLPLDSENSINTEAVINAIAPEKDVDGLTSINAGKLARGDLKDCFIPCTPKGCLELIKETGVQIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTADLDKEVNKGDILVVATGQPEMVKGEWIKPGAVVIDCGINYVPDDTKPNGRKVVGDVAYDEAKEKASFITPVPGGVGPMTVAMLMQSTVESAQRFLK 296          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_ZYMMO (Bifunctional protein folD OS=Zymomonas mobilis GN=folD PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.182e-51
Identity = 112/241 (46.47%), Postives = 146/241 (60.58%), Query Frame = -3
Query:  163 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAV---DDSTKKSG-YRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKRV 873
            K +    VG+ S    L    S+ EL+  +  LN  P VHGILVQLPLPKHI+   +L  I  +KDVDGFH +N G+LA+    P  +PCTP GC+ LL+ S  ++KGK A+V+GRS IVG P++ LLL AD TVT+ H HT + E + R+ADIV+AA G    +K SW+KPGA VIDVG N V   D++ K +G  R+VGDVDF EA K                   LL NT+  A+ +
Sbjct:   55 KEEMTTAVGMNSLSYRLDANASQQELLDLIETLNHDPAVHGILVQLPLPKHIDTPTILEAIDPDKDVDGFHVVNAGRLAIG--TPSLVPCTPAGCMMLLEHSLGSLKGKNALVIGRSTIVGRPMAQLLLAADCTVTVAHRHTKNLEELCRQADIVVAAVGIPHFVKASWLKPGAVVIDVGINRVPAEDEAAKAAGKTRIVGDVDFVEAAKVASAITPVPGGVGPMTIACLLNNTVQAARNL 293          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_HALHL (Bifunctional protein folD OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=folD PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.182e-51
Identity = 112/240 (46.67%), Postives = 148/240 (61.67%), Query Frame = -3
Query:  154 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKRVIEL 873
            KR+AC E GI S   DL   VSE EL+ ++  LNA P++ GILVQLPLP HI+E+ V+  I   KDVDGFHP N+G+LA+  R P   PCTP+G + LL  +G+ ++G+ AVV+G+SNIVG P++L LL A  TVT+ HS T +    VR+AD+V+A+ G+  +I+G WI  GA VIDVG N +D        +L GDVDF  A +                   LL NTLD A+   EL
Sbjct:   54 KRRACEEAGILSRAYDLDADVSEGELLERIDRLNADPEIDGILVQLPLPGHIDEQTVIERIDPVKDVDGFHPENMGRLAL--RLPGLRPCTPRGVMTLLHHTGIELEGRDAVVLGQSNIVGRPMTLELLNARCTVTVCHSRTRNVAERVRQADLVVASVGKPGLIQGDWIGEGAVVIDVGINRLDSG------KLTGDVDFEAASQRASWITPVPGGVGPMTVATLLENTLDAARNRDEL 285          
The following BLAST results are available for this feature:
BLAST of CX069661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_BRUC21.865e-5147.90Bifunctional protein folD OS=Brucella canis (strai... [more]
FOLD_BRUAB1.865e-5147.90Bifunctional protein folD OS=Brucella abortus GN=f... [more]
FOLD_BRUA21.865e-5147.90Bifunctional protein folD OS=Brucella abortus (str... [more]
FOLD_BRUA11.865e-5147.90Bifunctional protein folD OS=Brucella abortus (str... [more]
FOLD_BACV81.865e-5146.28Bifunctional protein folD OS=Bacteroides vulgatus ... [more]
FOLD_BACFR2.436e-5146.28Bifunctional protein folD OS=Bacteroides fragilis ... [more]
FOLD_BACFN2.436e-5146.28Bifunctional protein folD OS=Bacteroides fragilis ... [more]
C1TC_RAT2.436e-5146.69C-1-tetrahydrofolate synthase, cytoplasmic OS=Ratt... [more]
FOLD_ZYMMO3.182e-5146.47Bifunctional protein folD OS=Zymomonas mobilis GN=... [more]
FOLD_HALHL3.182e-5146.67Bifunctional protein folD OS=Halorhodospira haloph... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12A06_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12A06-B12-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069661 ID=CX069661; Name=CX069661; organism=Citrus sinensis; type=EST; length=878bp
CCCCCCCTTTTTTTTTAACTCATGAACCATCTTCACATGTATTATAAATT
ATTAACCATGATAAATAAAAATGTTTTCAAACAAAACCAAAGGAGAATGA
GTACCGTCTCATGAATTACAATGAAGTCAAGAACAAAGACGAGGGCAGTT
TTACAGCTCGATCACACGCTTTGCACCATCCAAGGTATTCCTGAGTAGCA
TAGCAACAGTCATTGGGCCCACACCACCTGGAACAGGAGTTACACATCCA
GCTACTTTACACGCTTCATGGAAATCCACATCTCCCACTAACCTATAGCC
TGACTTCTTGGTCGAGTCATCGACAGCATTTGTTCCAACATCAATAACAG
CAGCACCAGGCTTGATCCAACTTCCCTTGATCATCATTGCTTGTCCGGCT
GCAGCAATAACAATGTCAGCTTCACGAACGATACTTTCAGGATCAGGGGT
ATGTGAATGGACTATGGTTACAGTGGCATCAGCTTTCAGCAGCAGCAATG
AAACTGGGAGTCCAACAATGTTACTTCGACCCACCACAACAGCCCTTTTA
CCCTTTATAGTAACACCACTTCGTTTCAGAAGTTCAAGGCATCCCTTGGG
CGTGCAAGGAAGGAAGAGGGGGTCTCTGCCTTTCATTGCGAGCTTGCCAA
TGTTCAAAGGATGAAAGCCATCAACATCCTTCTCAAGGCTTATCTCACCT
AAAACTTTCTCTTCATTTATATGCTTCGGCAATGGAAGTTGAACCAATAT
ACCATGTACATCAGGCATTGCGTTAAGCTCGTGAACCTTGCTGATAAGCT
CGGCCTCGGAGACTTGCTCGGGGAGGTCTATGTCAAAAGACTTAATCCCA
ACTTCAGCACAAGCCTTTCTCTTCATGC
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