CX069661

Overview
NameCX069661
Unique NameCX069661
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_WOLWR (Bifunctional protein folD OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=folD PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.209e-50
Identity = 105/201 (52.24%), Postives = 135/201 (67.16%), Query Frame = -3
Query:  271 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDF 873
            K+K    +GI S  I LP+ +SE ELI K++ELN  P VHGILVQLPLP HI+  +V+  +S+EKDVDGFH  N+GKL +KG     +PCTPKG L L+K     + GK AVV+GRSNIVG P+  LLL+ + TVTI+HS + D      +ADIV+AA G+   ++  WIK GA VIDVG N+V+        +LVGDVDF
Sbjct:   53 KQKKAESIGISSETIVLPDNISEDELIEKINELNEDPSVHGILVQLPLPNHISASRVINTVSVEKDVDGFHDENVGKL-VKGEKNCLIPCTPKGSLHLIKSIEENLSGKNAVVIGRSNIVGKPMFYLLLQENCTVTILHSQSKDLAEYCSKADIVVAAVGKPNFVQADWIKKGAIVIDVGINSVNVG------KLVGDVDF 246          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_PARUW (Bifunctional protein folD OS=Protochlamydia amoebophila (strain UWE25) GN=folD PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.209e-50
Identity = 100/205 (48.78%), Postives = 140/205 (68.29%), Query Frame = -3
Query:  271 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKA----DATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDF 873
            K  AC  VGI S   +LP  +SE ELI +V +LN  P + GILVQLPLP HIN  +V   I  +KDVDGFHPLN+GK+ +   D  FLPCTP G   LL+R+G+ + GK A+++GRSNIVG P++ LL+++    +ATVT+ H +T + + +  +AD++I A GQ  +I    +K G  ++DVG N + DS+KK+GY++VGDVDF
Sbjct:   48 KTAACKAVGIASIKCELPFTISEEELIREVEKLNVDPQIDGILVQLPLPPHINSNRVNYHIDPQKDVDGFHPLNVGKMLIGELDG-FLPCTPFGIKTLLERTGIEVCGKHALIIGRSNIVGKPMAALLMQSYPGGNATVTVAHRYTKNLKELCLQADLIIVAIGQPKLITADMVKEGVIIVDVGINKIHDSSKKNGYQIVGDVDF 251          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_NEIMF (Bifunctional protein folD OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=folD PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.209e-50
Identity = 112/234 (47.86%), Postives = 142/234 (60.68%), Query Frame = -3
Query:  172 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGA 873
            K+ +C + GIKS   +LPE  S+ EL++ V  LN   +V GILVQLPLPKH++ + VL  IS +KDVDGFHP N+G+LA+K   PL  PCTPKG + LL+  G+  KGK+AVVVG SNIVG P +L LL A ATVT+ HS T +    V  ADI++   G    +KG WIKPGA VIDVG N +DD +      L GDV+F  A +                   L+ NTL  A
Sbjct:   54 KKTSCQKCGIKSLSYELPESTSQEELLALVDRLNVDSEVDGILVQLPLPKHLDSQAVLERISPDKDVDGFHPYNVGRLAVKM--PLMRPCTPKGVMTLLEAYGIDPKGKKAVVVGASNIVGRPQALELLLARATVTVCHSATENLADEVAGADILVVGVGIPNFVKGEWIKPGAVVIDVGINRLDDGS------LCGDVEFETAKERAAMITPVPGGVGPMTIATLMENTLHAA 279          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_BACTN (Bifunctional protein folD OS=Bacteroides thetaiotaomicron GN=folD PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.209e-50
Identity = 111/242 (45.87%), Postives = 147/242 (60.74%), Query Frame = -3
Query:  160 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK----ADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKRVI 873
            K KAC   G KS  I     V+E EL++KV ELN   DV G +VQLPLPKHI+E+KV+  I   KDVDGFHP+N+G++++    P ++  TP G LELLKR  +   GK+ VV+GRSNIVG P++ L+++     DATVT+ HS + D     +EADI+IAA GQ   +K   +K GA VIDVGT  V D++KKSG++L GDV F E                      L++NTL   K+ I
Sbjct:   52 KVKACEVCGFKSSLIRYESDVTEEELLAKVRELNNDDDVDGFIVQLPLPKHISEQKVIETIDYRKDVDGFHPINVGRMSI--GLPCYVSATPNGILELLKRYEIETSGKKCVVLGRSNIVGKPMASLMMQKAYPGDATVTVCHSRSKDLVKECQEADIIIAALGQPNFVKEEMVKEGAVVIDVGTTRVPDASKKSGFKLTGDVKFDEVAPKCSFITPVPGGVGPMTIVSLMKNTLLAGKKAI 291          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD2_PSEMY (Bifunctional protein folD 2 OS=Pseudomonas mendocina (strain ymp) GN=folD2 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.209e-50
Identity = 110/229 (48.03%), Postives = 146/229 (63.76%), Query Frame = -3
Query:  169 EVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAK 855
            E GI+S +  LP   +EA+L++ +H LNA   VHGILVQLPLP HI+E +VL  I+  KDVDGFH  N+G L+ +GRD L  PCTP GCL LL+ S   + GK AVV+GRSNIVG P++ LLLKA  +V++VHS + +   + R+ADIV+AA G+  ++   W+KPGA VIDVG N +D+  +    RLVGDVDF  A                     L++NTL  A+
Sbjct:   63 ECGIRSLEHKLPADTAEADLLALIHSLNADYSVHGILVQLPLPAHIDETRVLQAINPLKDVDGFHAENVGGLS-QGRDVL-TPCTPAGCLRLLQDSCGDLTGKHAVVIGRSNIVGKPMAALLLKAHCSVSVVHSKSANLRELCRQADIVVAAVGKPRLVDADWLKPGAVVIDVGINRIDEGGRS---RLVGDVDFDSALTRAAAITPVPGGVGPMTIAFLMKNTLVAAR 286          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD2_MYXXD (Bifunctional protein folD 2 OS=Myxococcus xanthus (strain DK 1622) GN=folD2 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.209e-50
Identity = 114/236 (48.31%), Postives = 150/236 (63.56%), Query Frame = -3
Query:  166 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKR 873
            K+KA  EVG +S+++   E +++A L+  +H+LNA P VHGILVQLPLP+HI+ + ++  +  EKDVDGFHPLN G L + GR      CTP G + LL+  G    GKRAVVVGRSNIVG P++L+LL+ +ATVTI HS + D    V  ADI++ A G A ++KG+WIKPGA VIDVG N      +K   +LVGDV+F  A +                  ML+RNTLD A R
Sbjct:   54 KKKAAEEVGFRSWELHPDEGITQAALLEVIHQLNADPAVHGILVQLPLPRHIDPDVIISAVKPEKDVDGFHPLNAGNLLL-GRSTT-RACTPYGVMRLLEEIGCDPAGKRAVVVGRSNIVGKPMALMLLQKNATVTICHSKS-DLRREVEGADILVVAVGAAELVKGAWIKPGAVVIDVGMN------RKPDGKLVGDVEFAAAAERASFITPVPGGVGPMTIAMLMRNTLDAAVR 280          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD1_MYXXD (Bifunctional protein folD 1 OS=Myxococcus xanthus (strain DK 1622) GN=folD1 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.209e-50
Identity = 110/238 (46.22%), Postives = 141/238 (59.24%), Query Frame = -3
Query:  166 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKA--DATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKR 873
            K +AC  +G++   + LPE VS+  L + +  LNA P VHGILVQLPLP H+  + VL  I   KDVDGFHP+N G LA  G    F+PCTP G +E+L+R  +  +GK  V+VGRS IV  P++ LL+    DATVTI H HTPD  S  R+ADI+I A G+  +I    +KPG  VIDVG N V D++   GYR+VGDVDF                       MLL NTL  A++
Sbjct:   52 KTRACESLGMRGQTLTLPEDVSKEALFAVIDRLNADPSVHGILVQLPLPAHLPYKAVLEHIHPAKDVDGFHPVNAG-LAFVGDPRAFVPCTPAGIMEMLRREDIPTRGKHVVIVGRSLIVSKPLASLLMAPGPDATVTITHRHTPDLASFTRQADILIVAVGKQNLITADMVKPGVVVIDVGQNRVSDASSPRGYRMVGDVDFDAIQPIASAITPVPGGVGPMTITMLLANTLQAARQ 288          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: C1TC_MOUSE (C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus GN=Mthfd1 PE=1 SV=3)

HSP 1 Score: 199.904 bits (507), Expect = 1.579e-50
Identity = 111/242 (45.87%), Postives = 149/242 (61.57%), Query Frame = -3
Query:  157 MKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKH--INEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKRVIE 876
            +K KA  E+GIK+  I LP   +E+E++  V  LN    VHG +VQLPL     IN E V+  I+ EKDVDG   ++ GKLA    +  F+PCTPKGCLEL+K +GV I G+ AVVVGRS IVG P+  LLL  +ATVT  HS T + +  V + DI++ A GQ  M+KG WIKPGA VID G N V D TK +G ++VGDV + EA +                  ML+++T++ A+R ++
Sbjct:   55 VKLKAAEEIGIKATHIKLPRTSTESEVLKYVISLNEDASVHGFIVQLPLDSENSINTEAVINAIAPEKDVDGLTSVSAGKLARGDLNDCFIPCTPKGCLELIKEAGVQIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTANLDKEVNKGDILVVATGQPEMVKGEWIKPGAVVIDCGINYVPDDTKPNGRKVVGDVAYDEAKERASFITPVPGGVGPMTVAMLMQSTVESAQRFLQ 296          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD3_PSEMY (Bifunctional protein folD 3 OS=Pseudomonas mendocina (strain ymp) GN=folD3 PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.062e-50
Identity = 109/229 (47.60%), Postives = 148/229 (64.63%), Query Frame = -3
Query:  169 EVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAK 855
            E GI+S +  LP   +EA L + + ELNA   VHGILVQLPLP HI+E++VL  ++  KDVDGFH  N+G L+ +GR+ L  PCTP GCL LL+ S   + GK AVV+GRSNIVG P++ LLLKA  +VT+VHS + + +++ R+ADIV+AA G+  ++   W+KPGA VIDVG N +D++ +    RLVGDVDF  A                     L++NTL  A+
Sbjct:   63 ECGIRSLEFKLPADTAEARLQALIAELNADASVHGILVQLPLPAHIDEQRVLQAVTPLKDVDGFHAENVGGLS-QGREVL-TPCTPAGCLRLLQDSCGDLTGKHAVVIGRSNIVGKPMAALLLKAHCSVTVVHSKSANLKTLCRQADIVVAAVGRPRLVDADWLKPGAVVIDVGINRIDENGRS---RLVGDVDFDSALPQVSAITPVPGGVGPMTIAYLMKNTLVAAR 286          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_RHORT (Bifunctional protein folD OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=folD PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.694e-50
Identity = 109/237 (45.99%), Postives = 143/237 (60.34%), Query Frame = -3
Query:  169 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAM--KGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAK 873
            K K    VG+ S    L    SEAE+++KV  LNA P + GILVQLPLP HI+E+K+L  I  +KDVDGFHP+N+G+L++     +   +PCTPKGCL LLK     + GK A+V+GRSNIVG P++ LLL A+ TVT+ HS + D   + R  DIV+AA G+  M+KG W+KPGA VIDVG N +  +      +LVGDVD+  A                     LL NTL+  K
Sbjct:   54 KEKMAVAVGMHSVVCRLAATTSEAEVLAKVEALNADPTIDGILVQLPLPAHIDEDKILLAIDPDKDVDGFHPVNVGRLSIGQSNGEHGMVPCTPKGCLMLLKGVLGDLTGKTALVIGRSNIVGKPMAQLLLSANCTVTLAHSRSRDLPDLCRRMDIVVAAVGRPEMVKGDWLKPGAVVIDVGMNRLPAAPGAEKGKLVGDVDYASAAAVAGAITPVPGGVGPMTIACLLANTLEACK 290          
The following BLAST results are available for this feature:
BLAST of CX069661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_WOLWR1.209e-5052.24Bifunctional protein folD OS=Wolbachia sp. subsp. ... [more]
FOLD_PARUW1.209e-5048.78Bifunctional protein folD OS=Protochlamydia amoebo... [more]
FOLD_NEIMF1.209e-5047.86Bifunctional protein folD OS=Neisseria meningitidi... [more]
FOLD_BACTN1.209e-5045.87Bifunctional protein folD OS=Bacteroides thetaiota... [more]
FOLD2_PSEMY1.209e-5048.03Bifunctional protein folD 2 OS=Pseudomonas mendoci... [more]
FOLD2_MYXXD1.209e-5048.31Bifunctional protein folD 2 OS=Myxococcus xanthus ... [more]
FOLD1_MYXXD1.209e-5046.22Bifunctional protein folD 1 OS=Myxococcus xanthus ... [more]
C1TC_MOUSE1.579e-5045.87C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus ... [more]
FOLD3_PSEMY2.062e-5047.60Bifunctional protein folD 3 OS=Pseudomonas mendoci... [more]
FOLD_RHORT2.694e-5045.99Bifunctional protein folD OS=Rhodospirillum rubrum... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12A06_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12A06-B12-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069661 ID=CX069661; Name=CX069661; organism=Citrus sinensis; type=EST; length=878bp
CCCCCCCTTTTTTTTTAACTCATGAACCATCTTCACATGTATTATAAATT
ATTAACCATGATAAATAAAAATGTTTTCAAACAAAACCAAAGGAGAATGA
GTACCGTCTCATGAATTACAATGAAGTCAAGAACAAAGACGAGGGCAGTT
TTACAGCTCGATCACACGCTTTGCACCATCCAAGGTATTCCTGAGTAGCA
TAGCAACAGTCATTGGGCCCACACCACCTGGAACAGGAGTTACACATCCA
GCTACTTTACACGCTTCATGGAAATCCACATCTCCCACTAACCTATAGCC
TGACTTCTTGGTCGAGTCATCGACAGCATTTGTTCCAACATCAATAACAG
CAGCACCAGGCTTGATCCAACTTCCCTTGATCATCATTGCTTGTCCGGCT
GCAGCAATAACAATGTCAGCTTCACGAACGATACTTTCAGGATCAGGGGT
ATGTGAATGGACTATGGTTACAGTGGCATCAGCTTTCAGCAGCAGCAATG
AAACTGGGAGTCCAACAATGTTACTTCGACCCACCACAACAGCCCTTTTA
CCCTTTATAGTAACACCACTTCGTTTCAGAAGTTCAAGGCATCCCTTGGG
CGTGCAAGGAAGGAAGAGGGGGTCTCTGCCTTTCATTGCGAGCTTGCCAA
TGTTCAAAGGATGAAAGCCATCAACATCCTTCTCAAGGCTTATCTCACCT
AAAACTTTCTCTTCATTTATATGCTTCGGCAATGGAAGTTGAACCAATAT
ACCATGTACATCAGGCATTGCGTTAAGCTCGTGAACCTTGCTGATAAGCT
CGGCCTCGGAGACTTGCTCGGGGAGGTCTATGTCAAAAGACTTAATCCCA
ACTTCAGCACAAGCCTTTCTCTTCATGC
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