CX069659
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069659 vs. ExPASy Swiss-Prot
Match: RL18A_DROME (60S ribosomal protein L18a OS=Drosophila melanogaster GN=RpL18A PE=1 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 7.604e-47 Identity = 86/158 (54.43%), Postives = 119/158 (75.32%), Query Frame = -1 Query: 304 QYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKL 777 +Y+VVGR LP+E + +Y+M+++A + + AKS+FWYFLR+LKK KK+ G++++I +++E +P KIKN+GIWLRY SR+G HNMY+EYRD T+ GAV Q Y +M +RHR R+ IQIIK +IPA +R KQFH+SKIKFPLV R +RKL Sbjct: 9 EYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNRKL 166
BLAST of CX069659 vs. ExPASy Swiss-Prot
Match: RL18A_DANRE (60S ribosomal protein L18a OS=Danio rerio GN=rpl18a PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 9.931e-47 Identity = 87/170 (51.18%), Postives = 123/170 (72.35%), Query Frame = -1 Query: 268 QYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLRTTYKATRPNLF 777 +Y+VVGR LP+ + P +YRM+++A N V AKS+FWYF+ +L+K+KK++G+++ +FEK+P K+KN+GIWLRY SR+G HNMY+EYRD T +GAV Q Y +M +RHR R+ IQI+K I A C+R + KQFH+SKIKFPL R +R R+ + + RPN F Sbjct: 9 EYKVVGRLLPSVKNPAPPLYRMRIFAPNHVVAKSRFWYFVSQLRKMKKASGEIVYCGLVFEKSPLKVKNFGIWLRYDSRSGTHNMYREYRDLTTSGAVTQCYRDMGARHRARAHAIQIMKVQVIAANKCRRPAIKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175
BLAST of CX069659 vs. ExPASy Swiss-Prot
Match: RL18A_CAEEL (60S ribosomal protein L18a OS=Caenorhabditis elegans GN=rpl-20 PE=2 SV=2) HSP 1 Score: 182.956 bits (463), Expect = 1.873e-45 Identity = 82/162 (50.62%), Postives = 120/162 (74.07%), Query Frame = -1 Query: 295 HQYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLRTT 780 ++Y VVGR +PTE + I++M+++ATN V AKS+FWYF+ L++VKK+NG++L+I ++FEKNP +KNYG+WL+Y SRTG+HNMY+EYRDTT+ GAV Q Y +M +RHR ++ I I+K T+ A+ KR K FH++KI+FPL R + + + TT Sbjct: 11 NEYVVVGRKIPTEKEPVTPIWKMQIFATNHVIAKSRFWYFVSMLRRVKKANGEILSIKQVFEKNPGTVKNYGVWLKYDSRTGHHNMYREYRDTTVAGAVTQCYRDMGARHRAQADRIHILKVQTVKAEDTKRAGIKMFHDAKIRFPLPHRVTKRKNLSVFTT 172
BLAST of CX069659 vs. ExPASy Swiss-Prot
Match: RL18A_ICTPU (60S ribosomal protein L18a OS=Ictalurus punctatus GN=rpl18a PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 3.195e-45 Identity = 85/170 (50.00%), Postives = 120/170 (70.59%), Query Frame = -1 Query: 268 QYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLRTTYKATRPNLF 777 +Y+VVGR LP+ + P +YRM+++A N V AKS+FWYF+ +L+K+KK+NG+ + + E++P K+KN+GIWLRY SR+G HNMY+EYRD T +GAV Q Y +M +RHR R+ IQI+K I A C+R + KQFH+SKIKFPL R +R R+ + + RP F Sbjct: 9 EYKVVGRLLPSAKNPTPPLYRMRIFAPNHVVAKSRFWYFVSQLRKMKKANGETVYCGLVHEQSPLKVKNFGIWLRYDSRSGTHNMYREYRDLTTSGAVTQCYRDMGARHRARAHAIQIMKVQVIAANKCRRAAIKQFHDSKIKFPLPHRVLR---RQHKPRFTTRRPQTF 175
BLAST of CX069659 vs. ExPASy Swiss-Prot
Match: RL20_YEAST (60S ribosomal protein L20 OS=Saccharomyces cerevisiae GN=RPL20A PE=1 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 2.990e-43 Identity = 87/173 (50.29%), Postives = 121/173 (69.94%), Query Frame = -1 Query: 268 FHQYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIKTATIPAKL-CKRESTKQFHNSKIKFPLVFRKVRPPSRKLRTTYKATRPNLF 783 F +YQV+GR LPTES PK++RM+++A+NEV AKS++WYFL+KL KVKK++G++++IN+I E +PTK+KN+G+W+RY SR+G HNMYKE RD + AVE +Y +MA+RHR R I I+K A I KR+ KQF +KFPL R +K T+ RP+ F Sbjct: 4 FKEYQVIGRRLPTESVPEPKLFRMRIFASNEVIAKSRYWYFLQKLHKVKKASGEIVSINQINEAHPTKVKNFGVWVRYDSRSGTHNMYKEIRDVSRVAAVETLYQDMAARHRARFRSIHILKVAEIEKTADVKRQYVKQFLTKDLKFPLPHR-----VQKSTKTFSYKRPSTF 171
BLAST of CX069659 vs. ExPASy Swiss-Prot
Match: RL18A_SALSA (60S ribosomal protein L18a OS=Salmo salar GN=rpl18a PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.990e-43 Identity = 83/170 (48.82%), Postives = 116/170 (68.24%), Query Frame = -1 Query: 268 QYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLRTTYKATRPNLF 777 +Y+VVGR LP+ + P +YRM+++A N V AKS+FWYF+ +L+K+KK+NG+ + + EK P K+KN+G+WLR SR+G HNMY+EYRD T + AV Q Y +M +RHR R+ I I+K I A C+R + KQFH+SKIKFPL R +R R+ + RPN F Sbjct: 9 EYKVVGRLLPSVKNPTPPLYRMRIFAPNHVVAKSRFWYFVSQLRKMKKANGETVYCGLVHEKTPLKVKNFGVWLRNDSRSGTHNMYREYRDLTTSAAVTQCYRDMGARHRARAHSIHIMKVQEIAANKCRRPAIKQFHDSKIKFPLPHRVLR---RQHNPRFTTKRPNTF 175
BLAST of CX069659 vs. ExPASy Swiss-Prot
Match: RL20_SCHPO (60S ribosomal protein L20 OS=Schizosaccharomyces pombe GN=rpl20a PE=1 SV=3) HSP 1 Score: 169.088 bits (427), Expect = 2.799e-41 Identity = 84/171 (49.12%), Postives = 114/171 (66.67%), Query Frame = -1 Query: 268 QYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIKTATIPAKL-CKRESTKQFHNSKIKFPLVFRKVRPPSRKLRTTYKATRPNLF 777 +YQVVGR +PTE + PK++RM+L+A NE AKS++WYFL+ + KVKK+ G+++AINEI E P K K +GIW+RY SR+G HNMYKE+RDTT GAVE MY +MA+RHR R I+I+K + K +R KQ N +KFPL R+ + + RP+ F Sbjct: 5 EYQVVGRKVPTEHEPVPKLFRMRLFAPNESVAKSRYWYFLKMINKVKKATGEIVAINEISEPKPLKAKVFGIWIRYDSRSGTHNMYKEFRDTTRVGAVEAMYADMAARHRARFRSIRILKVVEVEKKEDVRRNYVKQLLNPHLKFPLPHRRTGVVGLAGKKVFAPHRPSTF 175 The following BLAST results are available for this feature:
BLAST of CX069659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069659 ID=CX069659; Name=CX069659; organism=Citrus sinensis; type=EST; length=843bpback to top |