CX069656

Overview
NameCX069656
Unique NameCX069656
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069656 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 220.32 bits (560), Expect = 8.540e-57
Identity = 121/249 (48.59%), Postives = 157/249 (63.05%), Query Frame = 3
Query:    3 SILLDNSGSIISEKRSNPNRNSARGFEVIDEIKSALEKECPQTVSCADILALAARDSTVLTGGPSWEVPLGRRDSKGASLSGSNNDIPAPNNTFQTILTKFKLQGLD-IVDLVALSGSHTIGNARCTSFRQRLYNQSGNGQPDNTLDQSYAAQLRIGCPRSGGDQNLFFLDFVSPTKFDNSYFKNILASKGLLNSDQVLSTKNEA--SMELVKKYAENNDLFFQQFAKSMVKMGNISPLTGNRGEIRRN 740
            SILLDN+ S  +EK +  N NSARGF VID +K+A+E  CP+TVSCAD+L +AA+ S  L GGPSW VPLGRRDS  A L  +N ++PAP  T   +   F+  GL+   DLVALSG HT G  +C     RLYN S  G PD TL+ +Y   LR  CP +G    L   D  +PT FDN Y+ N+   KGL+ SDQ L +   A  ++ LV+ +A +   FF  F ++M +MGNI+PLTG +G+IR N
Sbjct:   82 SILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLN 330          
BLAST of CX069656 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.903e-56
Identity = 119/249 (47.79%), Postives = 160/249 (64.26%), Query Frame = 3
Query:    3 SILLDNSGSIISEKRSNPNRNSARGFEVIDEIKSALEKECPQTVSCADILALAARDSTVLTGGPSWEVPLGRRDSKGASLSGSNNDIPAPNNTFQTILTKFKLQGLDIVDLVALSGSHTIGNARCTSFRQRLYNQSGNGQPDNTLDQSYAAQLRIGCPRSGGDQNLFFLDFVSPTKFDNSYFKNILASKGLLNSDQVLSTKNEA---SMELVKKYAENNDLFFQQFAKSMVKMGNISPLTGNRGEIRRN 740
            S+LLD + S   EK + PN NS RGFEVID IK+A+E  CP  VSCADIL LAARDS  L+GGP W V LGR+D   A+ S +NN +P+P      I+ KF   GL++ D+VALSG+HT G A+C  F  RL+N +G G PD+TL+ +  + L+  CP  G       LD  S   FDN+YFKN+L  KGLL+SDQ+L + + A   +  LV+ Y+ +  LFF+ F  SM++MG++  + G  GE+R N
Sbjct:   80 SVLLDGTNS---EKLAIPNVNSVRGFEVIDTIKAAVENACPGVVSCADILTLAARDSVYLSGGPQWRVALGRKDGLVANQSSANN-LPSPFEPLDAIIAKFAAVGLNVTDVVALSGAHTFGQAKCDLFSNRLFNFTGAGTPDSTLETTLLSDLQTVCPIGGNGNKTAPLDRNSTDAFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKRLVEAYSRSQYLFFRDFTCSMIRMGSL--VNGASGEVRTN 322          
BLAST of CX069656 vs. ExPASy Swiss-Prot
Match: PERX_NICSY (Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.485e-56
Identity = 117/245 (47.76%), Postives = 158/245 (64.49%), Query Frame = 3
Query:    3 SILLDNSGSIISEKRSNPNRNSARGFEVIDEIKSALEKECPQTVSCADILALAARDSTVLTGGPSWEVPLGRRDSKGASLSGSNNDIPAPNNTFQTILTKFKLQGLDIVDLVALSGSHTIGNARCTSFRQRLYNQSGNGQPDNTLDQSYAAQLRIGCPRSGGDQNLFFLDFVSPTKFDNSYFKNILASKGLLNSDQVLSTKNEASMELVKKYAENNDLFFQQFAKSMVKMGNISPLTGNRGEIRR 737
            SILLD + SI SEK + PN  SARGF +I++ K  +EK CP  VSCADIL +AARD++   GGPSW V LGRRDS  AS + +  D+P P +    +++ F  +GL   D+VALSG+HTIG A+C  FR R+Y+   NG     +D  +A+  R  CP+ G + NL  LD V+P +FDN+YFKN++  KGLL SDQVL         +V +Y+ +   F   FA +M+KMG+ISPL+G  G IR+
Sbjct:   79 SILLDETPSIESEKTALPNLGSARGFGIIEDAKREVEKICPGVVSCADILTVAARDASAAVGGPSWTVKLGRRDSTTASKTLAETDLPGPFDPLNRLISSFASKGLSTRDMVALSGAHTIGQAQCFLFRDRIYS---NG---TDIDAGFASTRRRQCPQEGENGNLAPLDLVTPNQFDNNYFKNLIQKKGLLQSDQVLFNGGSTD-NIVSEYSNSARAFSSDFAAAMIKMGDISPLSGQNGIIRK 316          
BLAST of CX069656 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.154e-53
Identity = 113/235 (48.09%), Postives = 154/235 (65.53%), Query Frame = 3
Query:   39 EKRSNPNRNSARGFEVIDEIKSALEKECPQTVSCADILALAARDSTVLTGGPSWEVPLGRRDSKGASLSGSNNDIPAPNNTFQTILTKF-KLQGLDIVDLVALSGSHTIGNARCTSFRQRLYNQSGNGQPDNTLDQSYAAQLRIGCPRS--GGDQNLFFLDFVSPTKFDNSYFKNILASKGLLNSDQVLSTKNEASMELVKKYAENNDLFFQQFAKSMVKMGNISPLTGNRGEIR 734
            E+ + PN  S RGF VID IK+ +E  C QTVSCADIL +AARDS V  GGPSW VPLGRRDS  A+ + +N D+P  N++   +   F K  GL+ VD+VALSG+HTIG A+C++FR R+Y        D  ++ +YAA LR  CP++   GD +L  LD  +   FDN+Y+ N+++ KGLL+SDQVL   N+ +   V+ +A N   F   F  +M+KMGNI+P TG +G+IR
Sbjct:   80 EQNAIPNAGSLRGFGVIDSIKTQIEAICKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSIDANENEANTDLPGFNSSRAELEAAFLKKGGLNTVDMVALSGAHTIGQAQCSTFRARIYG------GDTNINAAYAASLRANCPQTVGSGDGSLANLDTTTANTFDNAYYTNLMSQKGLLHSDQVL-FNNDTTDNTVRNFASNPAAFSSSFTTAMIKMGNIAPKTGTQGQIR 307          
BLAST of CX069656 vs. ExPASy Swiss-Prot
Match: PER2_CUCSA (Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.571e-53
Identity = 114/247 (46.15%), Postives = 156/247 (63.16%), Query Frame = 3
Query:    3 SILLDNSGSIISEKRSNPNRNSARGFEVIDEIKSALEKECPQTVSCADILALAARDSTVLTGGPSWEVPLGRRDSKGASLSGSNNDIPAPNNTFQTILTKFKLQGLDIVDLVALSGSHTIGNARCTSFRQRLYNQSGNGQPDNTLDQSYAAQLRIGCPRSGGDQNLFFLDFVSPTKFDNSYFKNILASKGLLNSDQVL-STKNEASMELVKKYAENNDLFFQQFAKSMVKMGNISPLTGNRGEIRRN 740
            S+LL++   ++SE  +  N N   GF +++ IK+A+EK CP  VSCADILA+A+  S  L GGP WEV LGRRDS+ A+L G+ + +P+P      +  KF    LD  DLVALSG+HT G +RC  F +RL        PD+TL+  YA QLR  C  S G      LD  +P KFD +Y+ N+ ++ G L SDQVL ST  E ++++V  +A + + FF+ F +SM+ MGNI PLTGN+GEIR N
Sbjct:   48 SVLLEDQPGVVSELAAPGNANIT-GFNIVNNIKAAVEKACPGVVSCADILAIASVGSVNLAGGPCWEVQLGRRDSRRANLQGAIDGLPSPFENVTQLKRKFDRVDLDSTDLVALSGAHTFGKSRCQFFDRRL----NVSNPDSTLNPRYAQQLRQAC--SSGRDTFVNLDPTTPNKFDKNYYTNLQSNTGPLTSDQVLHSTPGEDTVKIVNLFAASQNQFFESFGQSMINMGNIQPLTGNQGEIRSN 287          
BLAST of CX069656 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 7.481e-53
Identity = 114/250 (45.60%), Postives = 157/250 (62.80%), Query Frame = 3
Query:    3 SILLDNSGS--IISEKRSNPNRNSARGFEVIDEIKSALEKECPQTVSCADILALAARDSTVLTGGPSWEVPLGRRDSKGASLSGSNNDIPAPNNTFQTILTKFKLQGLDIVDLVALSGSHTIGNARCTSFRQRLYNQSGN-GQPDNTLDQSYAAQLRIGCPRSGGDQNLFFLDFVSPTKFDNSYFKNILASKGLLNSDQVL-STKNEASMELVKKYAENNDLFFQQFAKSMVKMGNISPLTGNRGEIRRN 740
            S+LLD + +  +  EK +  N  S  GFEVID+IK+ALE  CP  VSCADILA+AA  S  L GGPS +V LGRRD + A  + +   +P   ++ + + +KF +  LD  DLVALSG+HT G  +C     RL+N SGN GQ D +++  +   LR  CP+ G       LD  SP  FDN YFKN+  ++G++ SDQ+L S+    ++ LV ++AEN + FF  FA+SM+KMGN+  LTG  GEIRR+
Sbjct:   75 SVLLDAAPADGVEGEKEAFQNAGSLDGFEVIDDIKTALENVCPGVVSCADILAIAAEISVALAGGPSLDVLLGRRDGRTAIRADAVAALPLGPDSLEILTSKFSVHNLDTTDLVALSGAHTFGRVQCGVINNRLHNFSGNSGQSDPSIEPEFLQTLRRQCPQGGDLTARANLDPTSPDSFDNDYFKNLQNNRGVIESDQILFSSTGAPTVSLVNRFAENQNEFFTNFARSMIKMGNVRILTGREGEIRRD 324          
BLAST of CX069656 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.407e-51
Identity = 106/245 (43.27%), Postives = 159/245 (64.90%), Query Frame = 3
Query:    3 SILLDNSGSIISEKRSNPNRNSARGFEVIDEIKSALEKECPQTVSCADILALAARDSTVLTGGPSWEVPLGRRDSKGASLSGSNNDIPAPNNTFQTILTKFKLQGLDIVDLVALSGSHTIGNARCTSFRQRLYNQSGNGQPDNTLDQSYAAQLRIGCPRSGGDQNLFFLDFVSPTKFDNSYFKNILASKGLLNSDQVLSTKNEASMELVKKYAENNDLFFQQFAKSMVKMGNISPLTGNRGEIRR 737
            S++L  + ++ SE+ S  N  SARGFEVID+ KSA+E  CP  VSCADI+A+AARD++   GGP ++V +GRRDS  A  + ++ D+P    +   +   F  +GL+  DLVALSG+HT+G A+C +F+ RLY+ S +      +D  +++  +  CP +GGD  L  LD V+P  FDN+Y++N++  KGLL SDQVL     ++  +V +Y+ N   F   F+ +M+KMG+I  LTG+ G+IRR
Sbjct:   71 SVMLVATPTMESERDSLANFQSARGFEVIDQAKSAVESVCPGVVSCADIIAVAARDASEYVGGPRYDVKVGRRDSTNAFRAIADRDLPNFRASLNDLSELFLRKGLNTRDLVALSGAHTLGQAQCLTFKGRLYDNSSD------IDAGFSSTRKRRCPVNGGDTTLAPLDQVTPNSFDNNYYRNLMQKKGLLESDQVLFGTGASTDSIVTEYSRNPSRFASDFSAAMIKMGDIQTLTGSDGQIRR 309          
BLAST of CX069656 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.143e-51
Identity = 111/246 (45.12%), Postives = 153/246 (62.20%), Query Frame = 3
Query:    6 ILLDNSGSIISEKRSNPNRN-SARGFEVIDEIKSALEKECPQTVSCADILALAARDSTVLTGGPSWEVPLGRRDSKGASLSGSNNDIPAPNNTFQTILTKFKLQGLDIVDLVALSGSHTIGNARCTSFRQRLYNQSGNGQPDNTLDQSYAAQLRIGCPRSGGDQNLFFLDFVSPTKFDNSYFKNILASKGLLNSDQVLSTKNEASMELVKKYAENNDLFFQQFAKSMVKMGNISPLTGNRGEIRRN 740
            +L D SG    E+   PN   + RGF V++ IK+ +E  CP  VSCADILA+AARD  V  GGPSW V LGRRDS  AS +G  +D+P P ++   +L+ +  + L+  D+VALSG+HTIG A+C+SF   +YN       D  ++ ++AA LR  CPR+G    L  LD  +P  FDN+Y+ N+L+ KGLL+SDQ L          V+ +A +   F   FA +MVKMGN+SP TG +G+IRR+
Sbjct:   83 LLNDTSG----EQSQGPNLTLNPRGFVVVNSIKAQVESVCPGIVSCADILAVAARDGVVALGGPSWTVLLGRRDST-ASFAGQTSDLPPPTSSLGQLLSAYNKKNLNPTDMVALSGAHTIGQAQCSSFNDHIYN-------DTNINSAFAASLRANCPRAGSTA-LAPLDTTTPNAFDNAYYTNLLSQKGLLHSDQELFNSGSTD-STVRSFASSTSAFNSAFATAMVKMGNLSPQTGTQGQIRRS 314          
BLAST of CX069656 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 7.002e-51
Identity = 112/246 (45.53%), Postives = 160/246 (65.04%), Query Frame = 3
Query:    3 SILLDNSGSIISEKRSNPNRNSARGFEVIDEIKSALEKECPQTVSCADILALAARDSTVLTGGPSWEVPLGRRDSKGASLSGSNNDIPAPNNTFQTILTKFKLQGLDIVDLVALSGSHTIGNARCTSFRQRLYNQSGNGQPDNTLDQSYAAQLRIGCPRSGGDQNLFFLDFVSPTKFDNSYFKNILASKGLLNSDQVLSTKNEASMELVKKYAENNDLFFQQFAKSMVKMGNISPLTGNRGEIRRN 740
            S+L+D + S +SEK + PN  S RGFE+IDEIK+ALE +CP TVSC+DI+ LA RD+  L GGPS+ VP GRRD   ++   +N  +P P  + + +L+ F  +G+++ D VAL G+HT+G A C +F  R+ N  G G PD ++D + A +LR  C   GG   L     V+P  FDN +F  I   KG+L  DQ++++ + A+  +V +YA NN+LF +QFA +MVKMG +  LTG+ GEIR N
Sbjct:   73 SLLIDPTTSQLSEKNAGPNF-SVRGFELIDEIKTALEAQCPSTVSCSDIVTLATRDAVFLGGGPSYVVPTGRRDGFVSNPEDANEILPPPFISVEGMLSFFGNKGMNVFDSVALLGAHTVGIASCGNFVDRVTNFQGTGLPDPSMDPTLAGRLRNTCAVPGGFAALDQSMPVTPVSFDNLFFGQIRERKGILLIDQLIAS-DPATSGVVLQYASNNELFKRQFAIAMVKMGAVDVLTGSAGEIRTN 316          
BLAST of CX069656 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 9.145e-51
Identity = 110/245 (44.90%), Postives = 153/245 (62.45%), Query Frame = 3
Query:    3 SILLDNSGSIISEKRSNPNRN-SARGFEVIDEIKSALEKECPQTVSCADILALAARDSTVLTGGPSWEVPLGRRDSKGASLSGSNNDIPAPNNTFQTILTKFKLQGLDIVDLVALSGSHTIGNARCTSFRQRLYNQSGNGQPDNTLDQSYAAQLRIGCPRSGGDQNLFFLDFVSPTKFDNSYFKNILASKGLLNSDQVLSTKNEASMELVKKYAENNDLFFQQFAKSMVKMGNISPLTGNRGEIR 734
            SILL+++     E+   PN   + R F+V++ IK+ +E  CP  VSCADILA+AARD  V  GGPSW V LGRRDS G S     +D+P P ++ Q +L  +  + LD  D+VALSG+HTIG A+C+SF   +YN       D  ++ ++A  L+  CP SGG  +L  LD ++PT F N Y+KN+L+ KGLL+SDQ L   N ++   V  +A ++  F   F  +MVKMGN+ PLTG  G+IR
Sbjct:   81 SILLNDTSG---EQTQPPNLTLNPRAFDVVNSIKAQVEAACPGVVSCADILAVAARDGVVALGGPSWTVLLGRRDSTG-SFPSQTSDLPPPTSSLQALLAAYSKKNLDATDMVALSGAHTIGQAQCSSFNGHIYN-------DTNINAAFATSLKANCPMSGG-SSLAPLDTMTPTVFGNDYYKNLLSQKGLLHSDQEL-FNNGSTDSTVSNFASSSAAFTSAFTAAMVKMGNLGPLTGTSGQIR 312          
The following BLAST results are available for this feature:
BLAST of CX069656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER1A_ARMRU8.540e-5748.59Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PERN_ARMRU1.903e-5647.79Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PERX_NICSY2.485e-5647.76Lignin-forming anionic peroxidase OS=Nicotiana syl... [more]
PER1_HORVU1.154e-5348.09Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PER2_CUCSA2.571e-5346.15Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV... [more]
PER58_ARATH7.481e-5345.60Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER4_ARATH2.407e-5143.27Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PER66_MAIZE3.143e-5145.12Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PER28_ARATH7.002e-5145.53Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PER42_MAIZE9.145e-5144.90Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12A03_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12A03-B6-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069656 ID=CX069656; Name=CX069656; organism=Citrus sinensis; type=EST; length=740bp
CATCAATATTACTAGACAACAGTGGCAGTATAATCAGTGAGAAGAGGTCG
AATCCCAATAGGAACTCTGCAAGAGGATTTGAAGTCATTGATGAGATCAA
GTCTGCTTTAGAGAAGGAGTGCCCTCAGACGGTTTCCTGTGCTGATATTT
TGGCTCTGGCTGCTAGAGATTCCACTGTTTTGACTGGTGGACCAAGCTGG
GAGGTGCCATTGGGAAGAAGAGACTCCAAAGGTGCAAGCTTGAGTGGCTC
AAACAACGACATTCCAGCTCCAAACAACACTTTCCAAACTATTCTAACCA
AGTTCAAGTTGCAAGGACTTGACATTGTCGATCTTGTAGCACTATCTGGG
AGCCACACAATCGGAAATGCTCGTTGCACTAGCTTCAGGCAGAGACTATA
CAACCAATCCGGCAACGGTCAACCGGACAACACTCTTGACCAATCATATG
CTGCCCAATTGCGAATAGGGTGCCCGAGATCCGGTGGTGACCAGAACTTA
TTTTTCTTGGACTTTGTCAGTCCAACGAAGTTTGATAACAGCTACTTCAA
GAATATATTAGCTTCAAAGGGCCTGTTGAACTCCGACCAAGTTCTCTCAA
CAAAGAACGAGGCATCAATGGAACTTGTGAAGAAATATGCCGAGAATAAT
GACCTTTTCTTTCAGCAATTTGCCAAGTCCATGGTTAAGATGGGTAACAT
CTCTCCATTGACTGGTAACAGGGGAGAAATCAGAAGAAAC
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