CX069640
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069640 vs. ExPASy Swiss-Prot
Match: RL12_HUMAN (60S ribosomal protein L12 OS=Homo sapiens GN=RPL12 PE=1 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.306e-56 Identity = 106/151 (70.20%), Postives = 127/151 (84.11%), Query Frame = -1 Query: 255 YVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEIP 707 Y+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+TVKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKH+GNIT D+++ IA MR RS+A++LSGT+KEILGT SVGC VDG+ P D+ +I G VE P Sbjct: 14 YLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
BLAST of CX069640 vs. ExPASy Swiss-Prot
Match: RL12_BOVIN (60S ribosomal protein L12 OS=Bos taurus GN=RPL12 PE=2 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.306e-56 Identity = 106/151 (70.20%), Postives = 127/151 (84.11%), Query Frame = -1 Query: 255 YVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEIP 707 Y+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+TVKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKH+GNIT D+++ IA MR RS+A++LSGT+KEILGT SVGC VDG+ P D+ +I G VE P Sbjct: 14 YLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
BLAST of CX069640 vs. ExPASy Swiss-Prot
Match: RL12_CHILA (60S ribosomal protein L12 OS=Chinchilla lanigera GN=RPL12 PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.145e-55 Identity = 105/151 (69.54%), Postives = 127/151 (84.11%), Query Frame = -1 Query: 255 YVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEIP 707 Y+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+TVKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKH+GNIT D+++ IA MR RS+A++LSGT+KEILGT SVGC VD + P D+ +I +G VE P Sbjct: 14 YLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDNRHPHDIIDDINNGVVECP 163
BLAST of CX069640 vs. ExPASy Swiss-Prot
Match: RL12_NEUCR (60S ribosomal protein L12 OS=Neurospora crassa GN=rpl-12 PE=3 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 6.280e-54 Identity = 102/150 (68.00%), Postives = 127/150 (84.67%), Query Frame = -1 Query: 255 VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEIP 704 +R TGGEVGA+S+LAPKIGPLGLSPKK+GEDIAK T DWKGLRVTVKLT+QNRQA V+VVP+A+ALVI+ALKEP RDRKK KNIKHN +++ D+++EIA MR +S +K+L GTV E+LGT SVGC VDGK PK +Q+ I G++++P Sbjct: 15 LRATGGEVGASSALAPKIGPLGLSPKKVGEDIAKATG-DWKGLRVTVKLTIQNRQAAVSVVPTASALVIRALKEPPRDRKKEKNIKHNKSVSFDEIVEIARTMRFKSFSKELKGTVLEVLGTAFSVGCQVDGKSPKAVQEAIHAGEIDVP 163
BLAST of CX069640 vs. ExPASy Swiss-Prot
Match: RL12_YEAST (60S ribosomal protein L12 OS=Saccharomyces cerevisiae GN=RPL12A PE=1 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 4.658e-49 Identity = 96/151 (63.58%), Postives = 122/151 (80.79%), Query Frame = -1 Query: 255 YVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEIP 707 Y+R GGEVGA+++LAPKIGPLGLSPKK+GEDIAK T K++KG++VTV+L +QNRQA +VVPSA++LVI ALKEP RDRKK KN+KH+GNI LD++IEIA MR +S + L+ KEILGT SVGC VD K+P D+ + I G++EIP Sbjct: 14 YLRAVGGEVGASAALAPKIGPLGLSPKKVGEDIAKAT-KEFKGIKVTVQLKIQNRQAAASVVPSASSLVITALKEPPRDRKKDKNVKHSGNIQLDEIIEIARQMRDKSFGRTLASVTKEILGTAQSVGCRVDFKNPHDIIEGINAGEIEIP 163
BLAST of CX069640 vs. ExPASy Swiss-Prot
Match: RL12_DICDI (60S ribosomal protein L12 OS=Dictyostelium discoideum GN=rpl12 PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.019e-48 Identity = 94/150 (62.67%), Postives = 121/150 (80.67%), Query Frame = -1 Query: 258 YVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEI 707 ++RV GGE GA S+LAPK+GPLG+SPKK+G+DIAK T + WKG++V+VKLT+QNR A V+PSA+ALVIKALKEP RDRKK KNIKHNGNI L+++ +IA MR +S+A D G+V EILGT SVGC V+GK P+D+Q I G++E+ Sbjct: 14 FLRVCGGEAGAMSTLAPKLGPLGVSPKKVGDDIAKAT-QPWKGMKVSVKLTIQNRIAVPEVLPSASALVIKALKEPPRDRKKEKNIKHNGNIPLEEICKIAKTMRFKSLAVDFKGSVLEILGTAHSVGCKVNGKSPRDIQAGIQSGEIEV 162
BLAST of CX069640 vs. ExPASy Swiss-Prot
Match: RL12_ENCCU (60S ribosomal protein L12 OS=Encephalitozoon cuniculi GN=RPL12 PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.961e-39 Identity = 83/151 (54.97%), Postives = 115/151 (76.16%), Query Frame = -1 Query: 255 VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMR-PRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEIP 704 ++V GGEV A+ LA ++GPLGLS K +GEDI K TA D+K L+V V+L +++R+A V V PS A L+IK+LKEP RDRKK KNI HNG++ + +V++IA + R RS + LSGTVKE+LGTC S+GC VDGK PK++ +EI G++++P Sbjct: 16 LQVVGGEVPGAT-LAQRVGPLGLSSKVVGEDIKKATA-DYKSLKVHVQLAIKDRKATVEVQPSVATLIIKSLKEPPRDRKKEKNILHNGSLRMTEVVDIARIARSSRSYSNSLSGTVKEVLGTCKSIGCKVDGKCPKEVTREIDAGEIKLP 164
BLAST of CX069640 vs. ExPASy Swiss-Prot
Match: RL11_ARCFU (50S ribosomal protein L11P OS=Archaeoglobus fulgidus GN=rpl11p PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21 Identity = 59/152 (38.82%), Postives = 93/152 (61.18%), Query Frame = -1 Query: 255 VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQN-RQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEIP 704 V V GG+ L P IGPLGL+ K++ + I E KD++GL V VK+ V++ R ++ V +P +AL+ + L + + + GN+T++ ++ IA + R +S++ L VKE+LGTC S+G TV+GK PK+L + I +G VEIP Sbjct: 7 VLVPGGQASPGPPLGPAIGPLGLNVKQVVDKI-NEATKDYEGLSVPVKIIVKDDRSFEIEVGIPPVSALIKRELGIEKGASNPGREVV--GNLTMEQLLNIARIKRQQSLSYTLKEVVKEVLGTCNSMGITVEGKSPKELTRMIEEGQVEIP 155
BLAST of CX069640 vs. ExPASy Swiss-Prot
Match: RL11_THEON (50S ribosomal protein L11P OS=Thermococcus onnurineus (strain NA1) GN=rpl11p PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.561e-20 Identity = 58/151 (38.41%), Postives = 91/151 (60.26%), Query Frame = -1 Query: 270 VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKV----AVVPSAAALVIKALKEPERDRKKTKNIKHN--GNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 704 V V GG+ L P IGPLGL+ K++ ++I K T KD++G++V VK+ V++ + K VP + L+ K L P K + H+ GN+T++ VI IA + +A DL KE++GT +S+G TV+GKDP+++Q+EI +G Sbjct: 7 VLVEGGKASPGPPLGPAIGPLGLNVKQVVDEINKAT-KDFEGMQVPVKIIVEDPKKKTFRIEVGVPPVSQLIKKELGIP----KGSSEAGHSPVGNLTMEQVIRIAKAKMDQMLAADLKAAAKEVIGTALSMGVTVEGKDPREVQKEIDEG 152
BLAST of CX069640 vs. ExPASy Swiss-Prot
Match: RL11_THEAC (50S ribosomal protein L11P OS=Thermoplasma acidophilum GN=rpl11p PE=3 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.478e-20 Identity = 54/151 (35.76%), Postives = 90/151 (59.60%), Query Frame = -1 Query: 258 VTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAK----VAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEI 698 V GG+ + P +GPLGL+ ++ ++I ++T K+++G+RV V +TV + + K +P +AL+ K L + K+ + I GN TLD ++++A +A DL E+LGTCVS+G VDGKDPK++Q++I G++ I Sbjct: 9 VEGGKATTGPPIGPALGPLGLNVAQVVKEINEKT-KEFQGMRVPVTITVVDPETKKYEITVGIPPTSALLKKKLGIEKGAAKRKEAIA--GNATLDQIVDVAKTKMASMLASDLKAATLEVLGTCVSMGINVDGKDPKEVQRQIKAGEISI 156 The following BLAST results are available for this feature:
BLAST of CX069640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069640 ID=CX069640; Name=CX069640; organism=Citrus sinensis; type=EST; length=707bpback to top |