CX069640
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069640 vs. ExPASy Swiss-Prot
Match: RL11_METST (50S ribosomal protein L11P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl11p PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14 Identity = 45/151 (29.80%), Postives = 83/151 (54.97%), Query Frame = -1 Query: 261 VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLT--VQNRQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVE 704 + V GG+ L P IGPLG++ ++ E+I K+TA D+ G++V VK+T + + ++++ P ALV+ L + + + +++ ++A + +A D KE++GTCVS+G V GKD ++ Q++I +GD + Sbjct: 8 ILVEGGKATPGPPLGPAIGPLGINMMQVVEEINKKTA-DFGGMKVPVKITADMDTKDFEISIGTPPTTALVLDELGIESGSHEPGTEVA--ADFSVEQAFKVARMKFDDLLANDYKHATKEVIGTCVSMGINVQGKDGRETQKDIDNGDYD 155
BLAST of CX069640 vs. ExPASy Swiss-Prot
Match: RL11_METS3 (50S ribosomal protein L11P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl11p PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.298e-14 Identity = 41/148 (27.70%), Postives = 82/148 (55.41%), Query Frame = -1 Query: 270 VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 704 + + GG L P +GP G++ ++ E+I ++A D+ G++V VK+++ + + P +L+++ L + + +I ++ +D ++IA + +A D VKE++GTCVS+G +VDGKDP++ Q+++ G Sbjct: 8 ILIEGGSATPGPPLGPALGPFGINMMQVVEEINNKSA-DFAGMKVPVKVSIDRDTKEFEIEIGTPPTTSLIMEELGIEKASHEPGADIV--ADLPIDKALKIARMKFDSLLANDYKAGVKEVMGTCVSMGLSVDGKDPREAQKDVDAG 152
BLAST of CX069640 vs. ExPASy Swiss-Prot
Match: RL11_SULTO (50S ribosomal protein L11P OS=Sulfolobus tokodaii GN=rpl11p PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.084e-13 Identity = 52/150 (34.67%), Postives = 78/150 (52.00%), Query Frame = -1 Query: 270 VTGGEVGAASSLAPKIGPLGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALK--EPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 698 V GG V LAP + LGL+ +GE + K + +KG+ V V L V K + +P+ +L++K EP D K G+I +D+I++A + +P+ AK L VK ILGT S+G TVD K PK+L + + +G Sbjct: 10 VEGGNVKPGPPLAPTLSQLGLN---VGEVVKKINDATSQFKGMSVPVTLEVDTDTKKYEIKVGIPTTTSLLLKFANASEPSGDPAHKKV----GDIKFEDIIQVAIMKKPQITAKTLKAAVKSILGTAHSIGLTVDKKSPKELVKAVDEG 152
BLAST of CX069640 vs. ExPASy Swiss-Prot
Match: RL11_NANEQ (50S ribosomal protein L11P OS=Nanoarchaeum equitans GN=rpl11p PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12 Identity = 44/146 (30.14%), Postives = 80/146 (54.79%), Query Frame = -1 Query: 270 VTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTV--QNRQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 698 VTGG+ + P + P ++P K+ +I K T K+++GL V V++ + + ++ K+ V +P +AL++KA ++ + GN+++ DV+EIA L VK +LGT + G V+ KDPK++ +E+ +G Sbjct: 10 VTGGKATPGPPIGPALSPFKINPGKVVAEINKLT-KEYEGLPVPVEIIINPETKEYKIIVGLPPTSALLMKAAGVTRGPQRTVH--EWVGNVSMKDVVEIAKKKIDSMPTSSLKAAVKSVLGTARATGIKVENKDPKEVTKEVDEG 152 The following BLAST results are available for this feature:
BLAST of CX069640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069640 ID=CX069640; Name=CX069640; organism=Citrus sinensis; type=EST; length=707bpback to top |