CX069639
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069639 vs. ExPASy Swiss-Prot
Match: RL11_PICTO (50S ribosomal protein L11P OS=Picrophilus torridus GN=rpl11p PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.472e-18 Identity = 54/151 (35.76%), Postives = 91/151 (60.26%), Query Frame = 2 Query: 11 VTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAK----VAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEI 451 V GG+ L P +GPLGL+ ++ +DI ++T K++ G++V V + V + K + VP +AL+ K L + KK + I GN TL+ + ++A R ++ ++ G V E+LG+ VS+G TVDG+DPK++Q+ I +G++EI Sbjct: 8 VEGGKATTGPPLGPALGPLGLNLGQVVKDINEKT-KNFAGMQVPVTVNVIDPATKKYEIIVGVPPTSALLKKELGIEKGASKKKEKIA--GNATLEQIKKVAESKRSALLSYNMKGAVLEVLGSAVSLGITVDGRDPKEVQKMIKNGEIEI 155
BLAST of CX069639 vs. ExPASy Swiss-Prot
Match: RL11_METHJ (50S ribosomal protein L11P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl11p PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.110e-17 Identity = 52/148 (35.14%), Postives = 85/148 (57.43%), Query Frame = 2 Query: 5 VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQ---AKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 439 V V GG+ A L P +GPLG++ K + ++I K+TA + G++V V++ V ++ V + P+ A ++ +A E TK + G++ L+ + IA + ++ DL VKE++GTCVS+G TV GK PKD+ +EI G Sbjct: 7 VLVPGGKATAGPPLGPALGPLGINVKAVVDEINKKTAS-FNGMQVPVRVEVDEKKNFTISVGIPPTTALIMKEAGVEKGSGEPNTKIV---GDVPLEAAVTIAKMKLDDMLSYDLKNAVKEVVGTCVSLGITVSGKKPKDMLKEIDSG 150
BLAST of CX069639 vs. ExPASy Swiss-Prot
Match: RL11_METS5 (50S ribosomal protein L11P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl11p PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.756e-17 Identity = 61/152 (40.13%), Postives = 82/152 (53.95%), Query Frame = 2 Query: 5 VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIK--ALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 439 V V GG V LAP + LGL+ +GE + K E +KG+ V V L V K V VP+ +L++K P D + K GNI++DDVIE+A +P AK+L G VK ILGT S+G TVD KDPK + +E+ +G Sbjct: 8 VVVEGGNVKPGPPLAPTLSQLGLN---VGEVVKKINEATSQFKGMTVPVTLDVDTDTKKYEVSVGVPTTTSLLVKKAGASGPSGDPEHKKI----GNISMDDVIEVAISKKPSLTAKELKGAVKSILGTAKSIGLTVDNKDPKLVVREVEEG 152
BLAST of CX069639 vs. ExPASy Swiss-Prot
Match: RL11_UNCMA (50S ribosomal protein L11P OS=Uncultured methanogenic archaeon RC-I GN=rpl11p PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.599e-17 Identity = 53/147 (36.05%), Postives = 83/147 (56.46%), Query Frame = 2 Query: 5 VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ-NRQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 439 V V GG+ L P +GPLG++ KK+ ++I +T KD+ G+ V VK+ V +R V V P +ALV+ LK + T N G++T++ I++A + R ++ L VKE+ GTCVS+G ++GK PK+ E+ G Sbjct: 7 VLVPGGKANPGPPLGPALGPLGINIKKVVDEINNKT-KDYNGMTVPVKVIVDASRNFTVEVGTPPTSALVLSELKLEKGSG--TPNTNFIGSLTIEQAIKVAQMKRDAMLSYTLKNAVKEVAGTCVSLGVMIEGKKPKEFIAEVNAG 150
BLAST of CX069639 vs. ExPASy Swiss-Prot
Match: RL11_METTH (50S ribosomal protein L11P OS=Methanobacterium thermoautotrophicum GN=rpl11p PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.701e-17 Identity = 51/148 (34.46%), Postives = 89/148 (60.14%), Query Frame = 2 Query: 5 VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQN--RQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 439 + + GG+ L P IGPLG++ ++ E+I ++TA D++G++V VK+ V R +V V P AL++ LK + + + +I+++ V++IA + ++ D VKEI+GTCVS+G TV+GKDP+++Q+E+ G Sbjct: 8 ILIDGGKATPGPPLGPAIGPLGINMMQVVEEINRKTA-DFEGMKVPVKIIVDTDTRDFEVEVGTPPTTALIMDELKLEKGSQDP--GMDKIADISMEQVLKIARMKFDALLSNDYKRAVKEIMGTCVSMGITVNGKDPREVQREVDQG 152
BLAST of CX069639 vs. ExPASy Swiss-Prot
Match: RL11_METMJ (50S ribosomal protein L11P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl11p PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.140e-17 Identity = 52/150 (34.67%), Postives = 87/150 (58.00%), Query Frame = 2 Query: 5 VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVV--PSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVE 448 V V GG+ A L P +GPLG++ K + +DI K+TA ++ G++V V +TV +++ V P ALV+K + + + G++ L+ + IA + ++ DL VKE+LGTCVSVG TV+GK P+++ Q + +G+ + Sbjct: 7 VLVPGGKATAGPPLGPALGPLGINVKAVVDDINKKTA-EFNGMQVPVTVTVDDKKNFTIEVGIPPTTALVMKEAGITKGSTEPGALVA--GDLPLEAAVRIARMKFDGMLSYDLKSAVKEVLGTCVSVGVTVEGKKPREMIQAVNNGEYD 153
BLAST of CX069639 vs. ExPASy Swiss-Prot
Match: RL11_NITMS (50S ribosomal protein L11P OS=Nitrosopumilus maritimus (strain SCM1) GN=rpl11p PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.047e-16 Identity = 50/146 (34.25%), Postives = 83/146 (56.85%), Query Frame = 2 Query: 11 VTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 439 VTGG A L P +GPLG++ ++ I +T KD++G++V V + V + K + +PSAAAL++K + + + G++T+D V+++AN S A L K I+GTC+++G V+GK PK++ EI +G Sbjct: 10 VTGGGASAGPPLGPALGPLGVNIMEVINAINDKT-KDFEGMKVPVTVIVDSDTKKYEIEIGIPSAAALIMK--EAGIQKGSGASGTEWAGDVTMDAVVKVANTKLENSYASSLKSVAKTIVGTCLALGVKVEGKTPKEITAEINEG 152
BLAST of CX069639 vs. ExPASy Swiss-Prot
Match: RL11_METPE (50S ribosomal protein L11P OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rpl11p PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.047e-16 Identity = 52/154 (33.77%), Postives = 90/154 (58.44%), Query Frame = 2 Query: 5 VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQ-AKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEIPLD 460 V V GG A + P +GPLG++ K + +DI K+TA ++ G++V VK+ V +++ ++V +P ALV+K + + + I G++ ++ + IA + ++ +L VKE++GTCVSVG TVDGK PK++ I+ G + L+ Sbjct: 7 VLVPGGRATAGPPIGPALGPLGINVKAVVDDINKKTA-EFNGMQVPVKIEVDDKKNVTISVGIPPTTALVMKEVGIEKGSAEPNSIIV--GDLPIEAAVRIARMKLDDMLSYELKTAVKEVIGTCVSVGVTVDGKKPKEILAAISAGQYDSVLE 157
BLAST of CX069639 vs. ExPASy Swiss-Prot
Match: RL11_METM7 (50S ribosomal protein L11P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl11p PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.368e-16 Identity = 51/151 (33.77%), Postives = 84/151 (55.63%), Query Frame = 2 Query: 5 VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVE 448 + V+GG+ A L P IGPLG++ ++ + I E KD+ G+ V VK+ V + V +P A+ALV K L ++ + GN+T++ V++IA + + +A +L KE++GTCVSVG V+G PK+ Q+ + G + Sbjct: 8 ILVSGGKATAGPPLGPAIGPLGVNIMQVVQKI-NEMTKDYDGMSVPVKVIVNTDKRTFEVEVGIPPASALVKKELGITTGSQEPKHQVA--GNLTMEQVVKIAKMKQDAMLAYNLKNASKEVIGTCVSVGVNVEGMTPKEAQKAVDAGQFD 155
BLAST of CX069639 vs. ExPASy Swiss-Prot
Match: RL11_METM6 (50S ribosomal protein L11P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl11p PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.368e-16 Identity = 51/151 (33.77%), Postives = 84/151 (55.63%), Query Frame = 2 Query: 5 VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVE 448 + V+GG+ A L P IGPLG++ ++ + I E KD+ G+ V VK+ V + V +P A+ALV K L ++ + GN+T++ V++IA + + +A +L KE++GTCVSVG V+G PK+ Q+ + G + Sbjct: 8 ILVSGGKATAGPPLGPAIGPLGVNIMQVVQKI-NEMTKDYDGMSVPVKVIVNTDKRTFEVEVGIPPASALVKKELGITTGSQEPKHQVA--GNLTMEQVVKIAKMKQDAMLAYNLKNASKEVIGTCVSVGVNVEGMTPKEAQKAVDAGQFD 155 The following BLAST results are available for this feature:
BLAST of CX069639 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069639 ID=CX069639; Name=CX069639; organism=Citrus sinensis; type=EST; length=707bpback to top |