CX069639
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069639 vs. ExPASy Swiss-Prot
Match: RL11_SULSO (50S ribosomal protein L11P OS=Sulfolobus solfataricus GN=rpl11p PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15 Identity = 53/152 (34.87%), Postives = 81/152 (53.29%), Query Frame = 2 Query: 5 VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIK--ALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 439 + V GG V LAP + LGL+ +GE + K E +KG+ V V + V + K + +P+ AL++K EP D K GN++L+ VI+IA + +P K L +K +LGT S+G TVD +DPK+L +E+ +G Sbjct: 8 IMVEGGNVKPGPPLAPTLSQLGLN---VGEVVKKLNEATSSFKGMSVPVTIEVDSSTKKYEIKVGIPTTTALLLKEAGASEPSGDPAHKKI----GNLSLEQVIKIAIMKKPGLTTKSLKAALKSMLGTAKSIGLTVDNRDPKELVKEVEEG 152
BLAST of CX069639 vs. ExPASy Swiss-Prot
Match: RL11_SULAC (50S ribosomal protein L11P OS=Sulfolobus acidocaldarius GN=rpl11p PE=1 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15 Identity = 51/150 (34.00%), Postives = 84/150 (56.00%), Query Frame = 2 Query: 5 VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKAL--KEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 439 + V GG L P + LGL+ +++ + I TA+ +KG+ V V + + + K + VP+ +L++KA+ +EP D K GN+ L+ + +IA +P+ AK L+ +K +LGT S+G TV+GKDPKD+ +EI G Sbjct: 8 IMVEGGSAKPGPPLGPTLSQLGLNVQEVVKKINDVTAQ-FKGMSVPVTIEIDSSTKKYDIKVGVPTTTSLLLKAINAQEPSGDPAHKKI----GNLDLEQIADIAIKKKPQLSAKTLTAAIKSLLGTARSIGITVEGKDPKDVIKEIDQG 152
BLAST of CX069639 vs. ExPASy Swiss-Prot
Match: RL11_METBF (50S ribosomal protein L11P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl11p PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15 Identity = 47/145 (32.41%), Postives = 86/145 (59.31%), Query Frame = 2 Query: 11 VTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQ-AKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 439 V GG+ L P +GPLG++ K++ E I ++T +D+ G++V VK+ V +++ ++ V P A+L++K L + + GNI++ V +IA + + ++ DL T+KE++GTCV +G TV+G + +D Q+ + G Sbjct: 9 VPGGKANPGPPLGPALGPLGVNIKEVVEKINEKT-RDYNGMQVPVKVIVDDKKNVEIEVGTPPTASLIMKELGIQKGSGNAGSEVV--GNISISQVAKIARMKKEDVLSYDLKATMKEVMGTCVPMGVTVEGVEARDSQKALDQG 150
BLAST of CX069639 vs. ExPASy Swiss-Prot
Match: RL11_SULIN (50S ribosomal protein L11P OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpl11p PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15 Identity = 53/152 (34.87%), Postives = 80/152 (52.63%), Query Frame = 2 Query: 5 VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIK--ALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 439 + V GG V LAP + LGL+ +GE + K E +KG+ V V + V + K + +P+ AL++K EP D K GN++L+ VI+I + +P K L VK +LGT S+G TV+ KDPK+L +E+ +G Sbjct: 8 IMVEGGNVKPGPPLAPTLSQLGLN---VGEVVKKLNEATSSFKGMSVPVTIEVDSNTKKYEIKVGIPTTTALLLKEAGASEPSGDPAHKKI----GNLSLEQVIKIVIMKKPGLTTKSLKAAVKSMLGTAKSIGVTVENKDPKELVKEVEEG 152
BLAST of CX069639 vs. ExPASy Swiss-Prot
Match: RL11_META3 (50S ribosomal protein L11P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl11p PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15 Identity = 50/151 (33.11%), Postives = 87/151 (57.62%), Query Frame = 2 Query: 5 VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ--NRQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVE 448 V VTGG+ A L P +GPLG++ + ++I ++T KD+ G+ V VK+ V +R ++ V +P +AL IK ++ + K I GN++++ ++IA + + ++ L KE++GTCVS G V+G P+D Q+ I G+ + Sbjct: 8 VLVTGGKATAGPPLGPAVGPLGINIMNVVKEINEKT-KDYAGMSVPVKVIVNTDDRSFEIEVGIPPTSAL-IKTELGLDKGSTEPKAIVA-GNLSMEQAVKIAKMKKDSMLSFTLKNATKEVIGTCVSTGINVEGMSPRDAQKAIDAGEFD 155
BLAST of CX069639 vs. ExPASy Swiss-Prot
Match: RL11_METTP (50S ribosomal protein L11P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rpl11p PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.802e-15 Identity = 48/149 (32.21%), Postives = 83/149 (55.70%), Query Frame = 2 Query: 11 VTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNR---QAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVE 448 V+GG+ A L P +GPLG++ + I E KD G++V VK+ V++R + +V P++A L+ +A E KK G+I++D VI++A + R ++ +L V EI+GTC ++G +DG K++Q+ + G + Sbjct: 9 VSGGKATAGPPLGPALGPLGVNVAAVVAKI-NELTKDLNGMQVPVKIIVKSRTEFEIEVGTPPTSALLLKEAGVEKGSGDKKN----FVGDISMDQVIKVAEIKRKNLLSSNLKSAVSEIVGTCGTLGIKIDGLTSKEVQKALASGSYD 152
BLAST of CX069639 vs. ExPASy Swiss-Prot
Match: RL11_DESK1 (50S ribosomal protein L11P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rpl11p PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14 Identity = 51/150 (34.00%), Postives = 85/150 (56.67%), Query Frame = 2 Query: 5 VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ--NRQAKVAV-VPSAAALVIK--ALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 439 V V GG+ L P + P ++ ++ + I + KD++GL V V++T+ ++ +V V +P+ AL++K K+P D K GNI+ + V+++A + R AK L VK +LGT S+G TVDGKDPK++Q+ + +G Sbjct: 8 VMVEGGKATPGPPLGPTLSPYKVNIPQVVKAI-NDATKDFEGLSVPVEITIDIDTKEFEVRVGIPTTTALLMKEAGAKQPTGDPAHQKI----GNISFEQVVKVAILKRDSLTAKTLRAAVKTVLGTARSIGITVDGKDPKEVQKLVDEG 152
BLAST of CX069639 vs. ExPASy Swiss-Prot
Match: RL11_METB6 (50S ribosomal protein L11P OS=Methanoregula boonei (strain 6A8) GN=rpl11p PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 50/147 (34.01%), Postives = 81/147 (55.10%), Query Frame = 2 Query: 5 VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNR-QAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 439 V V GG+ A L P +GPLG++ K + ++I +TA + G++V VK+ V ++ Q V V +P AL+ K + + N K GN+ + + IA + ++ +L KE++GTCVS+G VDGK PK++ +I G Sbjct: 7 VLVPGGKATAGPPLGPALGPLGINVKAVVDEINAKTAS-FNGMQVPVKVEVNDKKQFTVTVGIPPTTALIKKEANIEKGSAEP--NAKVAGNLPFEAAVRIAKMKLEGMLSYELKTATKEVVGTCVSMGVNVDGKRPKEVLADIAAG 150
BLAST of CX069639 vs. ExPASy Swiss-Prot
Match: RL11_METAC (50S ribosomal protein L11P OS=Methanosarcina acetivorans GN=rpl11p PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 45/145 (31.03%), Postives = 84/145 (57.93%), Query Frame = 2 Query: 11 VTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQ-AKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 439 V GG+ L P +GPLG++ K++ E I ++T +D+ G++V VK+ V +++ ++ V P A+LV+K L + + GN+T+ V ++A + + ++ DL +KE++G+CV +G V+G KD Q+ + +G Sbjct: 9 VPGGKANPGPPLGPALGPLGVNIKEVVEKINEKT-RDYNGMQVPVKVIVDDKKNVEIEVGTPPTASLVMKELGIQKGSGNAGSEVV--GNLTISQVAKVARMKKEDVLSYDLKAAMKEVMGSCVPMGVNVEGMKAKDCQKALDEG 150
BLAST of CX069639 vs. ExPASy Swiss-Prot
Match: RL11_METBU (50S ribosomal protein L11P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl11p PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14 Identity = 43/145 (29.66%), Postives = 83/145 (57.24%), Query Frame = 2 Query: 11 VTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQN-RQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 439 + GG+ L P +GPLG++ K + E I ++T KD+ G++V VK+ V + + ++ V P +AL++K L + + + GN+ + V +IA + + ++ L +KE++GTCV +G T++ DP++ Q+ + +G Sbjct: 9 IPGGKANPGPPLGPALGPLGVNIKDVIEKINEKT-KDYNGMQVPVKVIVNDDKSVEIEVGTPPTSALILKELNIEKGSGESGTVVV--GNLEIAQVAKIARMKKDDILSYSLKAAIKEVMGTCVPMGVTIENLDPRECQKAVDEG 150 The following BLAST results are available for this feature:
BLAST of CX069639 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069639 ID=CX069639; Name=CX069639; organism=Citrus sinensis; type=EST; length=707bpback to top |