DR403947

Overview
NameDR403947
Unique NameDR403947
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length684
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403947 vs. ExPASy Swiss-Prot
Match: GL19_ARATH (Putative germin-like protein subfamily 1 member 9 OS=Arabidopsis thaliana GN=At5g38910 PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.304e-61
Identity = 119/208 (57.21%), Postives = 139/208 (66.83%), Query Frame = 3
Query:   60 MKVIQFLIGFXXXXXXXXXXXXTDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQL 683
            MK   FL               +DP  LQD CV +N P DGVFVNGKFCKDPKL   EDFFF+GL +      + G + T  NV  +PGLNTLGIS  RIDY  YGQ PPH HPRASE+  V  GTL+VGFVTS+   N L +K L +GDVFVFPQGLIHFQ N+GK  A A++ L+SQ PG +TIADTVFG+NP I+P FL  AFQ+
Sbjct:    1 MKSFSFLAVLSILAITLSLSKASDPSSLQDFCVGVNTPADGVFVNGKFCKDPKLVTVEDFFFTGLHEARPPNPKTGSNVTAVNVNNLPGLNTLGISLVRIDYGVYGQNPPHTHPRASEVLYVAVGTLFVGFVTSNP-ENRLFSKTLYEGDVFVFPQGLIHFQVNVGKYPAVAFAGLSSQNPGVITIADTVFGSNPQIDPSFLASAFQV 207          
BLAST of DR403947 vs. ExPASy Swiss-Prot
Match: GL111_ARATH (Germin-like protein subfamily 1 member 11 OS=Arabidopsis thaliana GN=At5g38940 PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 4.957e-61
Identity = 122/210 (58.10%), Postives = 145/210 (69.05%), Query Frame = 3
Query:   54 ITMKVIQFLIGFXXXXXXXXXXXXTDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQL 683
            + MK + FL               +DP  LQD CV+ N   +GVFVNGKFCKDPKL  A+DFFFSGL       + +G   T  NV  + GLNTLGIS  RIDYA  GQ PPH HPRA+EI +V +GTL VGFVTS+  +N L +KVLN+GDVFVFP+GLIHFQ NIGK  A A++AL+SQ PG +TIA+TVFGANP+INP  L KAFQL
Sbjct:    1 MAMKSLSFLAVLSLLALTLPLAIASDPSQLQDFCVSANTSANGVFVNGKFCKDPKLVTADDFFFSGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVNGQNPPHTHPRATEILVVEQGTLLVGFVTSNP-DNRLFSKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIANTVFGANPAINPTILAKAFQL 209          
BLAST of DR403947 vs. ExPASy Swiss-Prot
Match: GL110_ARATH (Germin-like protein subfamily 1 member 10 OS=Arabidopsis thaliana GN=At5g38930 PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 9.348e-60
Identity = 120/210 (57.14%), Postives = 142/210 (67.62%), Query Frame = 3
Query:   54 ITMKVIQFLIGFXXXXXXXXXXXXTDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQL 683
            + MK + FL               +DP  LQD CV+ N   +GVFVNGKFCKDPKL  A+DFFF GL       + +G   T  NV  + GLNTLGIS  RIDYA  GQ PPH HPRA+EI +V  GTL VGFVTS+  +N L  KVLN+GDVFVFP+GLIHFQ NIGK  A A++AL+SQ PG +TIA TVFGANP+INP+ L KAFQ+
Sbjct:    1 MAMKSLSFLAALSLLALTLPLTIASDPSQLQDFCVSANSSANGVFVNGKFCKDPKLVTADDFFFPGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVDGQNPPHTHPRATEILVVELGTLLVGFVTSNP-DNRLFTKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIAPTVFGANPAINPNILAKAFQV 209          
BLAST of DR403947 vs. ExPASy Swiss-Prot
Match: GL12_ARATH (Putative germin-like protein subfamily 1 member 2 OS=Arabidopsis thaliana GN=At3g04150 PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.350e-58
Identity = 113/185 (61.08%), Postives = 133/185 (71.89%), Query Frame = 3
Query:  129 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQL 683
            DP  LQD CVA N   + VFVNGKFCKDPKL  A DFF+SGL  PGNT+NRLG   TD +V +IPGLNTLGI+  R+D+AP GQ PPHIHPRAS+I LVL+G L VGFV+S+  N TL +K+L  GDVF FP GL+ F  N GKT+A A   + SQ PG + I D VFG+NP I+P  L KAF L
Sbjct:   26 DPNPLQDYCVATNGT-NRVFVNGKFCKDPKLVTANDFFYSGLNIPGNTSNRLGASVTDVDVRRIPGLNTLGIAIARLDFAPGGQLPPHIHPRASQIILVLKGQLSVGFVSSNDYNYTLFSKILYPGDVFAFPIGLVQFHANTGKTHAVAIGVVGSQDPGVIPIGDAVFGSNPLIDPKLLAKAFAL 209          
BLAST of DR403947 vs. ExPASy Swiss-Prot
Match: GL21_ORYSJ (Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600 PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.302e-58
Identity = 117/186 (62.90%), Postives = 132/186 (70.97%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQL 683
            +DP  LQD CVA  D    V VNG  CKDP     EDFFFSGL   GNT+NR G   T  NV QI GLNTLGIS  R+DYAPYG  PPHIHPRA+EI  +LEG+LYVGFVTS+   N L  KVLNKGDVFVFPQGLIHFQFN G  +  A +AL+SQ PG +TIA+ VFG+ P I+ D L KAFQ+
Sbjct:   22 SDPSQLQDFCVA--DKMSQVLVNGFACKDPAAITVEDFFFSGLHMAGNTSNRQGSAVTGVNVAQISGLNTLGISLARVDYAPYGLNPPHIHPRATEILTILEGSLYVGFVTSNP-ENKLFTKVLNKGDVFVFPQGLIHFQFNYGTKDVIALAALSSQNPGVITIANAVFGSKPFISDDILAKAFQV 204          
BLAST of DR403947 vs. ExPASy Swiss-Prot
Match: GL112_ARATH (Putative germin-like protein subfamily 1 member 12 OS=Arabidopsis thaliana GN=At5g38960 PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 6.699e-58
Identity = 112/187 (59.89%), Postives = 137/187 (73.26%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNT-ANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQL 683
            +DP  LQD C+ +N P + +FVNGKFCKDPKL  A+DF+FSGL K   T ++ +G + T  NV QIPGLNTLGIS  RIDY   GQ PPH HPRA+EI LV EGTL+VGF +S    N L  K LNKGDVFVFP+GLIHFQ NIGK  A A+++L+SQ PG + I +T+FG+ P I+P+ L KAFQL
Sbjct:   25 SDPSPLQDFCIGVNTPANALFVNGKFCKDPKLVTADDFYFSGLDKARTTESSPVGSNVTTVNVNQIPGLNTLGISLVRIDYGINGQNPPHTHPRATEILLVQEGTLFVGFFSSFP-ENRLFNKTLNKGDVFVFPEGLIHFQVNIGKQPAVAFASLSSQNPGVIIIGNTLFGSKPPIDPNVLAKAFQL 210          
BLAST of DR403947 vs. ExPASy Swiss-Prot
Match: GL23_ORYSJ (Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800 PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.949e-57
Identity = 115/186 (61.83%), Postives = 134/186 (72.04%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQL 683
            +DP HLQD+CVA  D    V VNG  CKD +   AEDFFFSGL   GNT N+ G   T  NV Q+PGLNTLGIS  RIDYA +G  PPH HPRA+EI  VLEG+LYVGFVTS+   N L  KV+NKGDVFVFP+GL+HFQFN G T+A A  AL+SQ PG +T+A+ VFG+ PSI  D L KAFQ+
Sbjct:   29 SDPSHLQDLCVA--DKASTVRVNGVACKDGEDVAAEDFFFSGLHMAGNTTNKQGSAVTAVNVAQVPGLNTLGISLARIDYALHGLNPPHTHPRATEILTVLEGSLYVGFVTSNP-ENKLFTKVINKGDVFVFPKGLVHFQFNYGTTDAVAIVALSSQNPGVITVANAVFGSKPSITDDILAKAFQV 211          
BLAST of DR403947 vs. ExPASy Swiss-Prot
Match: GL22_ORYSJ (Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica GN=Os02g0491700 PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.069e-55
Identity = 114/186 (61.29%), Postives = 131/186 (70.43%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQL 683
            +DPG LQD CV   D    V VNG  CKD K   A DFFFSGL   GNT N+ G + T  NV QIPGLNT+G+S  RIDYAP G  PPH HPRA+EI  VLEG+LYVGFV S+   N L  KVLNKGDVFVFPQGL+HFQFN G  NA A +AL+SQ PG +T+ + VFG+ PSI+ D L KAFQ+
Sbjct:   29 SDPGLLQDFCVV--DKMSQVRVNGFPCKDAKDVVAGDFFFSGLHMAGNTTNKQGSNVTTVNVAQIPGLNTMGVSLVRIDYAPNGLNPPHTHPRATEIPTVLEGSLYVGFVISNP-ENKLFTKVLNKGDVFVFPQGLVHFQFNNGTNNAVALAALSSQNPGVITVGNAVFGSKPSISDDILAKAFQV 211          
BLAST of DR403947 vs. ExPASy Swiss-Prot
Match: GL16_ARATH (Germin-like protein subfamily 1 member 6 OS=Arabidopsis thaliana GN=At3g04200 PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.112e-55
Identity = 109/185 (58.92%), Postives = 132/185 (71.35%), Query Frame = 3
Query:  129 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQL 683
            DP  LQD CVA ++  + VFVNGKFCKDPK   A DF +SGL    NT N LG + T  +V +IPGLNTLG+S  R+D+A  GQ PPHIHPRA+EI +V +G L VGFV+S+Q NN L  KVL +GDVFVFP GLIHFQ N+ +T A A++   SQ PG + IAD VFG+NPSI  + L KAFQL
Sbjct:   27 DPNPLQDFCVAASET-NRVFVNGKFCKDPKSVTANDFSYSGLNIARNTTNFLGSNVTTVDVNKIPGLNTLGVSLARLDFAQGGQNPPHIHPRATEILVVTKGKLLVGFVSSNQDNNRLFYKVLKRGDVFVFPIGLIHFQMNVRRTRAVAFAGFGSQNPGTIRIADAVFGSNPSIPQEVLAKAFQL 210          
BLAST of DR403947 vs. ExPASy Swiss-Prot
Match: GLP1_MESCR (Germin-like protein OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.308e-55
Identity = 105/172 (61.05%), Postives = 120/172 (69.77%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLN--NTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFG 635
            TDP  LQD CV +N P DG+FVNG FCKDP     +DF F GL  P NT N LG   T      +PGLNTLGIS  R+D+AP+G  PPH HPRA+E+F+VLEGT YVGFVTS+  +  N L AKVLNKGDVFVFPQGLIHFQ NIG       S L+SQ PG +TIA+ VFG
Sbjct:   23 TDPTQLQDFCVGVNKPNDGLFVNGLFCKDPMEVNPDDFLFRGLNMPANTDNALGFAATLVTAANLPGLNTLGISVARLDFAPHGLNPPHTHPRATEVFVVLEGTFYVGFVTSNLADGGNKLFAKVLNKGDVFVFPQGLIHFQLNIGNYPGVGISGLSSQNPGVITIANAVFG 194          
The following BLAST results are available for this feature:
BLAST of DR403947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL19_ARATH1.304e-6157.21Putative germin-like protein subfamily 1 member 9 ... [more]
GL111_ARATH4.957e-6158.10Germin-like protein subfamily 1 member 11 OS=Arabi... [more]
GL110_ARATH9.348e-6057.14Germin-like protein subfamily 1 member 10 OS=Arabi... [more]
GL12_ARATH1.350e-5861.08Putative germin-like protein subfamily 1 member 2 ... [more]
GL21_ORYSJ2.302e-5862.90Putative germin-like protein 2-1 OS=Oryza sativa s... [more]
GL112_ARATH6.699e-5859.89Putative germin-like protein subfamily 1 member 12... [more]
GL23_ORYSJ1.949e-5761.83Putative germin-like protein 2-3 OS=Oryza sativa s... [more]
GL22_ORYSJ1.069e-5561.29Putative germin-like protein 2-2 OS=Oryza sativa s... [more]
GL16_ARATH3.112e-5558.92Germin-like protein subfamily 1 member 6 OS=Arabid... [more]
GLP1_MESCR5.308e-5561.05Germin-like protein OS=Mesembryanthemum crystallin... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246M12 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246M12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403947 ID=DR403947; Name=DR403947; organism=Citrus sinensis; type=EST; length=684bp
GGGGAAATCACAACACTTGATTAAAGTTTGAGATAGGCACATCCTGTGAC
TTAATCACCATGAAGGTAATTCAATTTCTTATAGGTTTTGCCCTCTTGGC
TTTGGCTTCTTCTTTGGCCTCTGCCACTGACCCTGGCCATCTTCAAGATG
TCTGTGTAGCCATCAATGACCCCAAGGATGGTGTGTTTGTGAATGGGAAG
TTCTGCAAGGACCCCAAGCTTGCGAGAGCAGAAGATTTCTTCTTCTCAGG
GCTAGGCAAGCCTGGAAACACAGCAAATCGACTTGGTGTTGATGAAACAG
ATGCAAATGTTGAGCAAATTCCAGGACTCAACACCCTTGGCATATCAGCA
TTCCGTATTGACTATGCACCATATGGCCAAAGGCCACCTCACATTCACCC
CCGTGCCAGCGAAATCTTCTTAGTCCTGGAAGGAACTCTTTATGTCGGTT
TTGTGACATCAGACCAACTGAATAACACACTCATCGCAAAAGTTCTAAAT
AAGGGAGATGTTTTTGTGTTTCCACAAGGTTTGATTCACTTCCAATTCAA
CATTGGAAAAACAAATGCAGCTGCCTATTCTGCTCTAAACAGCCAATTCC
CGGGTGAAGTTACCATAGCCGACACAGTCTTTGGAGCCAATCCTTCAATC
AATCCCGATTTTCTTGGCAAGGCATTCCAGTTGG
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