DR403941
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403941 vs. ExPASy Swiss-Prot
Match: SODM_HUMAN (Superoxide dismutase [Mn], mitochondrial OS=Homo sapiens GN=SOD2 PE=1 SV=2) HSP 1 Score: 224.557 bits (571), Expect = 4.494e-58 Identity = 111/196 (56.63%), Postives = 134/196 (68.37%), Query Frame = 1 Query: 145 QTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASD 732 Q +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + + LQ A+KFNGGGH+NHSIFW NL+P GGGEP L AI FGS + +K++A +QGSGW WLG + E L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ ++ Sbjct: 24 QKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTE 215
BLAST of DR403941 vs. ExPASy Swiss-Prot
Match: SODM1_CAEEL (Superoxide dismutase [Mn] 1, mitochondrial OS=Caenorhabditis elegans GN=sod-2 PE=1 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.494e-58 Identity = 115/194 (59.28%), Postives = 140/194 (72.16%), Query Frame = 1 Query: 154 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASD 732 +LPDLPYDY+ LEP IS EIMQLHHQKHH YV N N+ E+L +A++K + + LQ A+KFNGGGH+NHSIFW NLA + GGE P + L AI + FGSL+ L +++SA A+QGSGW WLG + K L V T ANQDPL +A T LVPL GIDVWEHAYYLQYKNV+PDY+ IW + NWK S+ Sbjct: 27 SLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSKGNVKEAIALQPALKFNGGGHINHSIFWTNLA---KDGGE-PSAELLTAIKSDFGSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKILKVATCANQDPL--EATTGLVPLFGIDVWEHAYYLQYKNVRPDYVNAIWKIANWKNVSE 214
BLAST of DR403941 vs. ExPASy Swiss-Prot
Match: SODM_PANTR (Superoxide dismutase [Mn], mitochondrial OS=Pan troglodytes GN=SOD2 PE=2 SV=2) HSP 1 Score: 224.172 bits (570), Expect = 5.869e-58 Identity = 110/193 (56.99%), Postives = 133/193 (68.91%), Query Frame = 1 Query: 154 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASD 732 +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + + LQ A+KFNGGGH+NHSIFW NL+P GGGEP L AI FGS + +K++A +QGSGW WLG + E L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ ++ Sbjct: 3 SLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTE 191
BLAST of DR403941 vs. ExPASy Swiss-Prot
Match: SODM_HYLLA (Superoxide dismutase [Mn], mitochondrial OS=Hylobates lar GN=SOD2 PE=2 SV=2) HSP 1 Score: 224.172 bits (570), Expect = 5.869e-58 Identity = 110/193 (56.99%), Postives = 133/193 (68.91%), Query Frame = 1 Query: 154 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASD 732 +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + + LQ A+KFNGGGH+NHSIFW NL+P GGGEP L AI FGS + +K++A +QGSGW WLG + E L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ ++ Sbjct: 3 SLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFDKFKEKLTATSVGVQGSGWGWLGFNKERGHLQIAACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTE 191
BLAST of DR403941 vs. ExPASy Swiss-Prot
Match: SODM_HORSE (Superoxide dismutase [Mn], mitochondrial OS=Equus caballus GN=SOD2 PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.001e-57 Identity = 111/196 (56.63%), Postives = 135/196 (68.88%), Query Frame = 1 Query: 145 QTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASD 732 Q +LPDL YDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + + LQ A+KFNGGGH+NH+IFW NL+P GGGEP L AI FGS + +K++A A +QGSGW WLG + + RL + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ S+ Sbjct: 24 QKHSLPDLQYDYGALEPYINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHTIFWTNLSP--NGGGEPKGKLLD-AIKRDFGSFDKFKEKLTAVSAGVQGSGWGWLGFNKDQGRLQIVACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVSE 215
BLAST of DR403941 vs. ExPASy Swiss-Prot
Match: SODM_CEBAP (Superoxide dismutase [Mn], mitochondrial OS=Cebus apella GN=SOD2 PE=2 SV=2) HSP 1 Score: 223.402 bits (568), Expect = 1.001e-57 Identity = 109/193 (56.48%), Postives = 133/193 (68.91%), Query Frame = 1 Query: 154 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASD 732 +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + + LQ A+KFNGGGH+NHSIFW NL+P GGGEP L AI FGS + ++++A +QGSGW WLG + E L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ ++ Sbjct: 3 SLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNDTEEKYKEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFDKFKERLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTE 191
BLAST of DR403941 vs. ExPASy Swiss-Prot
Match: SODM_CALJA (Superoxide dismutase [Mn], mitochondrial OS=Callithrix jacchus GN=SOD2 PE=2 SV=2) HSP 1 Score: 223.402 bits (568), Expect = 1.001e-57 Identity = 109/193 (56.48%), Postives = 133/193 (68.91%), Query Frame = 1 Query: 154 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASD 732 +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + + LQ A+KFNGGGH+NHSIFW NL+P GGGEP L AI FGS + ++++A +QGSGW WLG + E L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ ++ Sbjct: 3 SLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNDTEEKYKEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFDKFKERLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTE 191
BLAST of DR403941 vs. ExPASy Swiss-Prot
Match: SODM_CHLMU (Superoxide dismutase [Mn] OS=Chlamydia muridarum GN=sodA PE=3 SV=2) HSP 1 Score: 219.55 bits (558), Expect = 1.446e-56 Identity = 101/190 (53.16%), Postives = 136/190 (71.58%), Query Frame = 1 Query: 157 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKY 723 LPDLPYDY ALEP IS EIM LHHQKHHQ Y+ N N+A++ L A D + ++ + A++FNGGGH+NHS+FW+ LAP ++GGG PP L I+ +GS + ++ + AA+QGSGW WL + + L+++TTANQDPL +A T ++PLLG+DVWEHAYYLQYKN + DYLKN +++NW Y Sbjct: 8 LPDLPYDYDALEPVISAEIMHLHHQKHHQGYINNLNEALKSLDVASATQDLTGLIAINPALRFNGGGHINHSLFWEMLAPQNKGGGTPPRHELLKLIEKFWGSFDNFLKNFISSSAAVQGSGWGWLAFCPKKQELMIQTTANQDPL--EATTGMIPLLGVDVWEHAYYLQYKNARLDYLKNFPSIINWDY 195
BLAST of DR403941 vs. ExPASy Swiss-Prot
Match: SODM_RABIT (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Oryctolagus cuniculus GN=SOD2 PE=2 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 9.371e-56 Identity = 106/193 (54.92%), Postives = 132/193 (68.39%), Query Frame = 1 Query: 154 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASD 732 +LPDLPYDY ALEP I+ +IM+LHH KHH AYV N N E+ +AL + D + V LQ A+KF GGGH+NH+IFW NL+P GGGEP L AI FGS + ++++A +QGSGW WLG + E L + ANQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+ W+ ++ Sbjct: 8 SLPDLPYDYGALEPHINAQIMELHHSKHHAAYVNNLNATEEKYREALARGDVTAHVALQPALKFKGGGHINHTIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFDKFKERLTAVSVGVQGSGWGWLGFNKEQGHLQIAACANQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVITWENVTE 196
BLAST of DR403941 vs. ExPASy Swiss-Prot
Match: SODM_CHLPN (Superoxide dismutase [Mn] OS=Chlamydia pneumoniae GN=sodA PE=3 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 2.088e-55 Identity = 98/188 (52.13%), Postives = 134/188 (71.28%), Query Frame = 1 Query: 154 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 717 +LP+LPYDY ALEP IS EIM LHHQKHHQ Y+ N N A+++L A + + + ++ L+ A++FNGGGH+NHS+FW+ LAP+ +GGG+PP L I+ +G+++ ++K+ A +QGSGW WLG + LV++ TANQDPL L PLLG+DVWEHAYYLQYKNV+ DYLK ++NW Sbjct: 7 SLPELPYDYDALEPVISSEIMILHHQKHHQIYINNLNAALKRLDAAETQQNLNELIALEPALRFNGGGHINHSLFWETLAPIDQGGGQPPKHELLSLIERFWGTMDNFLKKLIEVAAGVQGSGWAWLGFCPAKQELVLQATANQDPLEPLTGKL-PLLGVDVWEHAYYLQYKNVRMDYLKAFPQIINW 193 The following BLAST results are available for this feature:
BLAST of DR403941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403941 ID=DR403941; Name=DR403941; organism=Citrus sinensis; type=EST; length=736bpback to top |