DR403941
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403941 vs. ExPASy Swiss-Prot
Match: SODM_AGABI (Superoxide dismutase [Mn], mitochondrial OS=Agaricus bisporus GN=sod PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.970e-39 Identity = 87/192 (45.31%), Postives = 116/192 (60.42%), Query Frame = 1 Query: 157 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKF--NGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYA 726 LPDLPY Y ALEP IS +IM+LHH+K Q + + T+ V ++ F GH+NHS+FW+NLAP GG+ L AID FG L+ L ++ + A +QGSGW WLG++ KRL + TT NQDPL+ LVP++G+D+WEHA+YLQY NVK DYL IW+V+N+ A Sbjct: 5 LPDLPYAYDALEPYISRQIMELHHKKTSSDLCE-----CAQHCRGCLRHSTAVVGGFDLSLFFILTTLGHINHSLFWQNLAPAAGAGGQLKPGPLKDAIDQTFGGLDNLKKEFNTTTAGIQGSGWGWLGVNPSNKRLEISTTPNQDPLL----NLVPIIGVDIWEHAFYLQYLNVKADYLNAIWSVINFDEA 187
BLAST of DR403941 vs. ExPASy Swiss-Prot
Match: SODM_BRAFL (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Branchiostoma floridae PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.041e-38 Identity = 85/147 (57.82%), Postives = 98/147 (66.67%), Query Frame = 1 Query: 199 ISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDV 639 IS EIMQ+HHQKHH YV N N A EQL +A++K D + ++ LQ AIKFNGGGH+NHSIFW NL P GGGEP L AI FGS EA +KM+A A+QGSGW WLGLD K+L + NQDPL L PLLGIDV Sbjct: 2 ISAEIMQVHHQKHHATYVNNLNAAEEQLAEAIHKQDVTKMIALQSAIKFNGGGHINHSIFWNNLCP--SGGGEPT-GPLAEAITRDFGSFEAFKEKMTAATVAVQGSGWGWLGLDPTSKKLRIVACPNQDPL-EGTTGLKPLLGIDV 144
BLAST of DR403941 vs. ExPASy Swiss-Prot
Match: SODM_SHIFL (Superoxide dismutase [Mn] OS=Shigella flexneri GN=sodA PE=3 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 3.955e-38 Identity = 86/203 (42.36%), Postives = 117/203 (57.64%), Query Frame = 1 Query: 154 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQL-------QGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKA---PTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 729 TLP LPY Y ALEP + M++HH KHHQ YV N N A+E L + N + +L + ++ N GGH NHS+FWK L G L AI+ FGS++ + A+ GSGW WL L + +L V +TANQD PL+ +A + P+LG+DVWEHAYYL+++N +PDY+K WNV+NW A+ Sbjct: 4 TLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKK-----GTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKGD--KLAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAA 199
BLAST of DR403941 vs. ExPASy Swiss-Prot
Match: SODM_ECO57 (Superoxide dismutase [Mn] OS=Escherichia coli O157:H7 GN=sodA PE=3 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 3.955e-38 Identity = 86/203 (42.36%), Postives = 117/203 (57.64%), Query Frame = 1 Query: 154 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQL-------QGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKA---PTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 729 TLP LPY Y ALEP + M++HH KHHQ YV N N A+E L + N + +L + ++ N GGH NHS+FWK L G L AI+ FGS++ + A+ GSGW WL L + +L V +TANQD PL+ +A + P+LG+DVWEHAYYL+++N +PDY+K WNV+NW A+ Sbjct: 4 TLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKK-----GTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKGD--KLAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAA 199
BLAST of DR403941 vs. ExPASy Swiss-Prot
Match: SODM1_STAAW (Superoxide dismutase [Mn/Fe] 1 OS=Staphylococcus aureus (strain MW2) GN=sodA PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.955e-38 Identity = 82/199 (41.21%), Postives = 116/199 (58.29%), Query Frame = 1 Query: 157 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDT------STVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDV 735 LP LPY + ALEP E M++HH +HH YVT N AVE ++ S +Q A++ NGGGH+NHS+FW+ L+P E G I +GSLE ++ + + AA GSGW WL ++ +L + TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++ Sbjct: 5 LPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVEGTDLESKSIEEIVANLDSVPANIQTAVRNNGGGHLNHSLFWELLSPNSEEKGTVVEK-----IKEQWGSLEEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQNKRPDYIGAFWNVVNWEKVDEL 194
BLAST of DR403941 vs. ExPASy Swiss-Prot
Match: SODM1_STAAS (Superoxide dismutase [Mn/Fe] 1 OS=Staphylococcus aureus (strain MSSA476) GN=sodA PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.955e-38 Identity = 82/199 (41.21%), Postives = 116/199 (58.29%), Query Frame = 1 Query: 157 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDT------STVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDV 735 LP LPY + ALEP E M++HH +HH YVT N AVE ++ S +Q A++ NGGGH+NHS+FW+ L+P E G I +GSLE ++ + + AA GSGW WL ++ +L + TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++ Sbjct: 5 LPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVEGTDLESKSIEEIVANLDSVPANIQTAVRNNGGGHLNHSLFWELLSPNSEEKGTVVEK-----IKEQWGSLEEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQNKRPDYIGAFWNVVNWEKVDEL 194
BLAST of DR403941 vs. ExPASy Swiss-Prot
Match: SODM1_STAAR (Superoxide dismutase [Mn/Fe] 1 OS=Staphylococcus aureus (strain MRSA252) GN=sodA PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.955e-38 Identity = 82/199 (41.21%), Postives = 116/199 (58.29%), Query Frame = 1 Query: 157 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDT------STVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDV 735 LP LPY + ALEP E M++HH +HH YVT N AVE ++ S +Q A++ NGGGH+NHS+FW+ L+P E G I +GSLE ++ + + AA GSGW WL ++ +L + TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++ Sbjct: 5 LPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVEGTDLESKSIEEIVANLDSVPANIQTAVRNNGGGHLNHSLFWELLSPNSEEKGTVVEK-----IKEQWGSLEEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQNKRPDYIGAFWNVVNWEKVDEL 194
BLAST of DR403941 vs. ExPASy Swiss-Prot
Match: SODM1_STAAN (Superoxide dismutase [Mn/Fe] 1 OS=Staphylococcus aureus (strain N315) GN=sodA PE=1 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.955e-38 Identity = 82/199 (41.21%), Postives = 116/199 (58.29%), Query Frame = 1 Query: 157 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDT------STVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDV 735 LP LPY + ALEP E M++HH +HH YVT N AVE ++ S +Q A++ NGGGH+NHS+FW+ L+P E G I +GSLE ++ + + AA GSGW WL ++ +L + TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++ Sbjct: 5 LPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVEGTDLESKSIEEIVANLDSVPANIQTAVRNNGGGHLNHSLFWELLSPNSEEKGTVVEK-----IKEQWGSLEEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQNKRPDYIGAFWNVVNWEKVDEL 194
BLAST of DR403941 vs. ExPASy Swiss-Prot
Match: SODM1_STAAM (Superoxide dismutase [Mn/Fe] 1 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=sodA PE=1 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.955e-38 Identity = 82/199 (41.21%), Postives = 116/199 (58.29%), Query Frame = 1 Query: 157 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDT------STVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDV 735 LP LPY + ALEP E M++HH +HH YVT N AVE ++ S +Q A++ NGGGH+NHS+FW+ L+P E G I +GSLE ++ + + AA GSGW WL ++ +L + TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++ Sbjct: 5 LPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVEGTDLESKSIEEIVANLDSVPANIQTAVRNNGGGHLNHSLFWELLSPNSEEKGTVVEK-----IKEQWGSLEEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQNKRPDYIGAFWNVVNWEKVDEL 194
BLAST of DR403941 vs. ExPASy Swiss-Prot
Match: SODM1_STAAC (Superoxide dismutase [Mn/Fe] 1 OS=Staphylococcus aureus (strain COL) GN=sodA PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.955e-38 Identity = 82/199 (41.21%), Postives = 116/199 (58.29%), Query Frame = 1 Query: 157 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDT------STVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDV 735 LP LPY + ALEP E M++HH +HH YVT N AVE ++ S +Q A++ NGGGH+NHS+FW+ L+P E G I +GSLE ++ + + AA GSGW WL ++ +L + TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++ Sbjct: 5 LPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVEGTDLESKSIEEIVANLDSVPANIQTAVRNNGGGHLNHSLFWELLSPNSEEKGTVVEK-----IKEQWGSLEEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQNKRPDYIGAFWNVVNWEKVDEL 194 The following BLAST results are available for this feature:
BLAST of DR403941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403941 ID=DR403941; Name=DR403941; organism=Citrus sinensis; type=EST; length=736bpback to top |