CX069593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069593 vs. ExPASy Swiss-Prot
Match: CSN2_MOUSE (COP9 signalosome complex subunit 2 OS=Mus musculus GN=Cops2 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.500e-13 Identity = 50/195 (25.64%), Postives = 87/195 (44.62%), Query Frame = 1 Query: 43 PAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALEDPRAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQGVGCLIIFEDPKADAIYPA 627 P G I G +H E +++ A++ + PR LKY++L +++ + S +A PE+ AM + A+ + FE L+ + + +DP + H+ L + Q L +LI+PY+R+ I I++ + + + VE L Q ILD G +DQ L + + A Y A Sbjct: 231 PLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSG--INPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRIDQVNQLLELDHQKRGGARYTA 423
BLAST of CX069593 vs. ExPASy Swiss-Prot
Match: CSN2_HUMAN (COP9 signalosome complex subunit 2 OS=Homo sapiens GN=COPS2 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.500e-13 Identity = 50/195 (25.64%), Postives = 87/195 (44.62%), Query Frame = 1 Query: 43 PAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALEDPRAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQGVGCLIIFEDPKADAIYPA 627 P G I G +H E +++ A++ + PR LKY++L +++ + S +A PE+ AM + A+ + FE L+ + + +DP + H+ L + Q L +LI+PY+R+ I I++ + + + VE L Q ILD G +DQ L + + A Y A Sbjct: 231 PLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSG--INPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRIDQVNQLLELDHQKRGGARYTA 423
BLAST of CX069593 vs. ExPASy Swiss-Prot
Match: CSN2_DANRE (COP9 signalosome complex subunit 2 OS=Danio rerio GN=cops2 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.500e-13 Identity = 50/195 (25.64%), Postives = 87/195 (44.62%), Query Frame = 1 Query: 43 PAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALEDPRAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQGVGCLIIFEDPKADAIYPA 627 P G I G +H E +++ A++ + PR LKY++L +++ + S +A PE+ AM + A+ + FE L+ + + +DP + H+ L + Q L +LI+PY+R+ I I++ + + + VE L Q ILD G +DQ L + + A Y A Sbjct: 231 PLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSG--INPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTINGRIDQVNQLLELDHQKRGGARYTA 423
BLAST of CX069593 vs. ExPASy Swiss-Prot
Match: CSN2_DROME (COP9 signalosome complex subunit 2 OS=Drosophila melanogaster GN=alien PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.769e-11 Identity = 45/176 (25.57%), Postives = 76/176 (43.18%), Query Frame = 1 Query: 43 PAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALEDPRAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQ 570 P G I G +H E +++ A++ + PR LKY++L +++ + S +A PE+ AM + +++ + FET LR ++ + D + H+ L + Q L +LI PY + I IA + + VE L ILD G +DQ Sbjct: 232 PLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSG--INPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINEFETILRQHRSNIMADQFIREHIEDLLRNIRTQVLIKLIRPYKNIAIPFIANALNIEPAEVESLLVSCILDDTIKGRIDQ 405
BLAST of CX069593 vs. ExPASy Swiss-Prot
Match: CSN2_NEUCR (COP9 signalosome complex subunit 2 OS=Neurospora crassa GN=csn-2 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.781e-11 Identity = 52/209 (24.88%), Postives = 95/209 (45.45%), Query Frame = 1 Query: 43 PAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALEDPRAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQGVGCLIIFEDPKADAIYPATL--ETISNMGKVV 663 P QG I G +H E+++K A S + D R + LKY+LL +++ D+ S + P + AM + DA+ + + +E L+ L DP + ++ + + + + +LI PY+R+ I+ +AE + + V LS +I+D + G +D+ G L + AD + T+ E + N+ V Sbjct: 234 PKIQGVIRECGGKMHMSEENWKEAQSDFFEAFRNYDEAGDLRRIQVLKYLLLTTMLMKS--DINPFDSQEMKPYRNDPRIFAMTELVDAYQRDDIYRYEDVLQK-NTDLLADPFIAENIDEVTRNMRTKGVVKLIAPYTRMRISWLAERLRITEPEVMDILSFLIVDGRVKGRIDEHKGVLELESREDADHVQAITVLSEAVGNLFNAV 439 The following BLAST results are available for this feature:
BLAST of CX069593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069593 ID=CX069593; Name=CX069593; organism=Citrus sinensis; type=EST; length=844bpback to top |