CX069560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: FTSH_BUCBP (Cell division protease ftsH OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=ftsH PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.761e-17 Identity = 42/99 (42.42%), Postives = 66/99 (66.67%), Query Frame = 3 Query: 534 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 T+ + G D+ +E++E++E +K P F+ LG PKG+L+ GPPGTGKTLLA+A+A F +SGS+ V+ ++G G+ VR++F +R+ AP I Sbjct: 150 TFSDVAGCDEAKEEVQELVEY-LKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKVAPCI 247
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAI (Cell division protease ftsH OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ftsH PE=3 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.761e-17 Identity = 42/100 (42.00%), Postives = 66/100 (66.00%), Query Frame = 3 Query: 531 STYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 +T+ + G D+ +E+ E++E +K P F+ LG PKG+L+ GPPGTGKTLLA+A+A F +SGS+ V+ ++G G+ VR++F +R+ AP I Sbjct: 149 TTFADVAGCDEAKEEVSELVEY-LKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKSAPCI 247
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: FTSH_BACSU (Cell division protease ftsH homolog OS=Bacillus subtilis GN=ftsH PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.761e-17 Identity = 44/95 (46.32%), Postives = 63/95 (66.32%), Query Frame = 3 Query: 546 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 + G D++ +E+ EV+E +K P F LG PKGVLL GPPGTGKTLLA+A A F +SGS+ V+ ++G G+ VR+LF A+++AP + Sbjct: 163 VAGADEEKQELVEVVEF-LKDPRKFAELGARIPKGVLLVGPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCL 256
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: FTSH1_ORYSJ (Cell division protease ftsH homolog 1, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH1 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.761e-17 Identity = 48/109 (44.04%), Postives = 70/109 (64.22%), Query Frame = 3 Query: 510 KVEKVPDS--TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 K ++VP++ T+ + G DQ E++EV++ +K+P+ + +LG PKG LL GPPGTGKTLLARAVA F + SE V+ ++G G+ VR+LF A+ AP I Sbjct: 220 KFQEVPETGVTFVDVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKAPCI 327
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: RCA1_YEAST (Mitochondrial respiratory chain complexes assembly protein RCA1 OS=Saccharomyces cerevisiae GN=RCA1 PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 3.607e-17 Identity = 45/95 (47.37%), Postives = 61/95 (64.21%), Query Frame = 3 Query: 546 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 + G D+ +EI E + +K P +E +G P+G +L GPPGTGKTLLA+A A F VSGSE V+ ++G G+ VR+LF ARE+APSI Sbjct: 350 VAGCDEAKEEIMEFVSF-LKEPSRYEKMGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENAPSI 443
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: KATL1_DANRE (Katanin p60 ATPase-containing subunit A-like 1 OS=Danio rerio GN=katnal1 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.607e-17 Identity = 50/106 (47.17%), Postives = 68/106 (64.15%), Query Frame = 3 Query: 513 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQP-KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS 827 V + P+ +D I L+ K ++E + LP+ P+ F+ GI +P KGVL+ GPPGTGKT+LA+AVA TF VS S L KY GE ++VR LF MAR +AP+ Sbjct: 197 VSRNPNIHWDDIADLEDAKKLLREAVVLPMWMPDFFK--GIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPT 300
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: FTSH_SHIFL (Cell division protease ftsH OS=Shigella flexneri GN=ftsH PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.607e-17 Identity = 44/108 (40.74%), Postives = 68/108 (62.96%), Query Frame = 3 Query: 507 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 M E +T+ + G D+ +E+ E++E ++ P F+ LG PKGVL+ GPPGTGKTLLA+A+A F +SGS+ V+ ++G G+ VR++F A++ AP I Sbjct: 141 MLTEDQIKTTFADVAGCDEAKEEVAELVEY-LREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCI 247
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: FTSH_SALTY (Cell division protease ftsH OS=Salmonella typhimurium GN=ftsH PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.607e-17 Identity = 44/108 (40.74%), Postives = 68/108 (62.96%), Query Frame = 3 Query: 507 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 M E +T+ + G D+ +E+ E++E ++ P F+ LG PKGVL+ GPPGTGKTLLA+A+A F +SGS+ V+ ++G G+ VR++F A++ AP I Sbjct: 141 MLTEDQIKTTFADVAGCDEAKEEVAELVEY-LREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCI 247
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: FTSH_SALTI (Cell division protease ftsH OS=Salmonella typhi GN=ftsH PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.607e-17 Identity = 44/108 (40.74%), Postives = 68/108 (62.96%), Query Frame = 3 Query: 507 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 M E +T+ + G D+ +E+ E++E ++ P F+ LG PKGVL+ GPPGTGKTLLA+A+A F +SGS+ V+ ++G G+ VR++F A++ AP I Sbjct: 141 MLTEDQIKTTFADVAGCDEAKEEVAELVEY-LREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCI 247
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: FTSH_ECOLI (Cell division protease ftsH OS=Escherichia coli (strain K12) GN=ftsH PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.607e-17 Identity = 44/108 (40.74%), Postives = 68/108 (62.96%), Query Frame = 3 Query: 507 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 M E +T+ + G D+ +E+ E++E ++ P F+ LG PKGVL+ GPPGTGKTLLA+A+A F +SGS+ V+ ++G G+ VR++F A++ AP I Sbjct: 141 MLTEDQIKTTFADVAGCDEAKEEVAELVEY-LREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCI 247 The following BLAST results are available for this feature:
BLAST of CX069560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 366
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069560 ID=CX069560; Name=CX069560; organism=Citrus sinensis; type=EST; length=832bpback to top |