CX069560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PEX1_DICDI (Peroxisome biogenesis factor 1 OS=Dictyostelium discoideum GN=pex1 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.790e-16 Identity = 45/95 (47.37%), Postives = 57/95 (60.00%), Query Frame = 3 Query: 546 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 IGGLD +KE IE P K+P+LF+S + G+LLYGP G GKTLLA A+A FI V G EL+ KYIG + VR++F A P + Sbjct: 868 IGGLDSVRAMLKETIEWPTKYPKLFQSSPLRLRSGILLYGPTGCGKTLLASAIAGECGLNFISVKGPELLNKYIGSSEQGVRDVFSRASSAKPCV 962
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: FTSH_STRR6 (Cell division protease ftsH homolog OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=ftsH PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.790e-16 Identity = 44/95 (46.32%), Postives = 63/95 (66.32%), Query Frame = 3 Query: 546 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 + G +++ +E+ EV+E +K P+ F LG P GVLL GPPGTGKTLLA+AVA F +SGS+ V+ ++G G+ VR LF A++ AP+I Sbjct: 189 VAGAEEEKQELVEVVEF-LKDPKRFTKLGARIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAI 282
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: FTSH_STRPN (Cell division protease ftsH homolog OS=Streptococcus pneumoniae GN=ftsH PE=3 SV=3) HSP 1 Score: 86.6557 bits (213), Expect = 1.790e-16 Identity = 44/95 (46.32%), Postives = 63/95 (66.32%), Query Frame = 3 Query: 546 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 + G +++ +E+ EV+E +K P+ F LG P GVLL GPPGTGKTLLA+AVA F +SGS+ V+ ++G G+ VR LF A++ AP+I Sbjct: 189 VAGAEEEKQELVEVVEF-LKDPKRFTKLGARIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAI 282
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: FTSH3_ORYSJ (Cell division protease ftsH homolog 3, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH3 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.790e-16 Identity = 43/95 (45.26%), Postives = 62/95 (65.26%), Query Frame = 3 Query: 546 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 + G D+ +EI E + +K+P+ +E LG PKG LL GPPGTGKTLLA+A A + F+ +SGS+ ++ ++G G VR LF AR+ +PSI Sbjct: 322 VAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCSPSI 415
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: FTSH_MYCPU (Cell division protease ftsH homolog OS=Mycoplasma pulmonis GN=ftsH PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.338e-16 Identity = 43/101 (42.57%), Postives = 67/101 (66.34%), Query Frame = 3 Query: 528 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 D + I G + I+E++E+++ +K+P+ + + G PKG+LL GPPGTGKTLLA+A A + F +S S V+ Y+G G++ VRE+F AR+ AP+I Sbjct: 208 DKKFTDIAGNKEPIEEVQELVDY-LKNPKKYAAAGARFPKGILLGGPPGTGKTLLAKATAGEANVPFFFISASSFVELYVGLGAKRVREMFKEARKLAPAI 307
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: FTSH5_ORYSJ (Cell division protease ftsH homolog 5, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH5 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.338e-16 Identity = 42/101 (41.58%), Postives = 65/101 (64.36%), Query Frame = 3 Query: 528 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 ++ + + G+D+ E++E++ ++ P+ F LG PKGVLL GPPGTGKT+LARA+A F SGSE + ++G G+R VR+LF A++ +P I Sbjct: 226 NTKFSDVKGVDEAKAELEEIVHY-LRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFAAAKKRSPCI 325
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: YME1_CAEEL (Protein YME1 homolog OS=Caenorhabditis elegans GN=ymel-1 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.988e-16 Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = 3 Query: 555 LDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 +D+ E++E+++ +K PE + LG PKGVLL GPPGTGKTLLARA+A F +GSE + +G+G+R VR+LF A+ AP I Sbjct: 206 MDEAKLEVEEIVDY-LKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAGEAQVPFFHTAGSEFDEVLVGQGARRVRDLFDKAKARAPCI 296
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: FTSH9_ORYSJ (Cell division protease ftsH homolog 9, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH9 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.802e-16 Identity = 45/99 (45.45%), Postives = 62/99 (62.63%), Query Frame = 3 Query: 534 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 T+ + G D KE++EV+E +K+P F LG PKG+LL G PGTGKTLLA+A+A F +GSE + ++G G+R VR LF A++ AP I Sbjct: 326 TFKDVKGCDDAKKELEEVVEY-LKNPSKFTRLGGKLPKGILLTGSPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCI 423
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: KTNA1_RAT (Katanin p60 ATPase-containing subunit A1 OS=Rattus norvegicus GN=Katna1 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.883e-16 Identity = 49/106 (46.23%), Postives = 67/106 (63.21%), Query Frame = 3 Query: 513 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQP-KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS 827 + + P+ + I L + K ++E + LP+ PE F+ GI +P KGVL+ GPPGTGKTLLA+AVA TF VS S L KY GE ++VR LF MAR ++P+ Sbjct: 200 ISQNPNVRWYDIADLVEAKKLLQEAVVLPMWMPEFFK--GIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPA 303
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: KTNA1_MOUSE (Katanin p60 ATPase-containing subunit A1 OS=Mus musculus GN=Katna1 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.883e-16 Identity = 49/106 (46.23%), Postives = 67/106 (63.21%), Query Frame = 3 Query: 513 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQP-KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS 827 + + P+ + I L + K ++E + LP+ PE F+ GI +P KGVL+ GPPGTGKTLLA+AVA TF VS S L KY GE ++VR LF MAR ++P+ Sbjct: 200 ISQNPNVRWYDIADLVEAKKLLQEAVVLPMWMPEFFK--GIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPA 303 The following BLAST results are available for this feature:
BLAST of CX069560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 366
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069560 ID=CX069560; Name=CX069560; organism=Citrus sinensis; type=EST; length=832bpback to top |