CX069560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: FTSHA_ARATH (Cell division protease ftsH homolog 10, mitochondrial OS=Arabidopsis thaliana GN=FTSH10 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.883e-16 Identity = 42/95 (44.21%), Postives = 62/95 (65.26%), Query Frame = 3 Query: 546 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 + G ++ +EI E + +++P+ +E LG PKG LL GPPGTGKTLLA+A A + F+ +SGS+ ++ ++G G VR LF AR+ APSI Sbjct: 329 VAGCEEAKQEIMEFVHF-LQNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSI 422
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: FTSH4_ARATH (Cell division protease ftsH homolog 4, mitochondrial OS=Arabidopsis thaliana GN=FTSH4 PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 1.160e-15 Identity = 42/95 (44.21%), Postives = 62/95 (65.26%), Query Frame = 3 Query: 546 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 + G+D+ E++E++ ++ P+ F LG PKGVLL GPPGTGKT+LARA+A F SGSE + ++G G+R VR+LF A++ +P I Sbjct: 229 VKGVDEAKAELEEIVHY-LRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKCSPCI 322
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: ATD1B_DANRE (ATPase family AAA domain-containing protein 1-B OS=Danio rerio GN=atad1b PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 1.160e-15 Identity = 45/100 (45.00%), Postives = 61/100 (61.00%), Query Frame = 3 Query: 534 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQP-KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 T+ I GLD+ I E+K+ + LPI+ LFE + QP KGVLLYGPPG GKTL+A+A A FI + S L K+ GE ++ +F +A + PSI Sbjct: 93 TWHDIAGLDEVITELKDTVILPIQKRHLFEGSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGFRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSI 192
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: YME1_SCHMA (Protein YME1 homolog OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.515e-15 Identity = 40/101 (39.60%), Postives = 64/101 (63.37%), Query Frame = 3 Query: 528 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 D ++ + G D+ KE+ +V+E +++PE F +G PKGVLL GPPG GKTLLA+AV+ F+ SGS + +G G+ +R+LF A++++P + Sbjct: 162 DVSFSDVQGCDEVKKELVDVVEF-LRNPEKFNQIGAKLPKGVLLVGPPGVGKTLLAKAVSGEAQVPFLYASGSSFDEVLVGLGASRIRQLFTTAKQNSPCL 261
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: SPAST_CAEEL (Probable spastin homolog spas-1 OS=Caenorhabditis elegans GN=spas-1 PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.515e-15 Identity = 47/119 (39.50%), Postives = 71/119 (59.66%), Query Frame = 3 Query: 486 VDPLVNLMKVEKVPDST---YDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQP-KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 VD ++ +++V D+T D + G ++E + LP +P LF+ G+ QP KG+LL+GPPG GKTLLA+AVA + F +S S L K++G+ + +R LF +AR PSI Sbjct: 218 VDKVIGERLLDEVLDNTGVRMDDVAGCHSAKAALEEAVILPALNPNLFK--GLRQPVKGILLFGPPGNGKTLLAKAVAGESKQMFFNISASSLTSKWVGDSEKTIRGLFQIARNAQPSI 334
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: MSP1_CAEEL (Mitochondrial sorting homolog OS=Caenorhabditis elegans GN=mspn-1 PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.515e-15 Identity = 40/98 (40.82%), Postives = 62/98 (63.27%), Query Frame = 3 Query: 537 YDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 +D IGG ++ + E+K+ I LP++ S ++ P+G+LLYGPPG GKTLLA+AVA C FI + S L K+ GE ++ +F +A++ P+I Sbjct: 82 WDEIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLLAKAVARAAGCRFINLQVSNLTDKWYGESQKLAAAVFSVAQKFQPTI 179
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: FTSH_MYCPN (Cell division protease ftsH homolog OS=Mycoplasma pneumoniae GN=ftsH PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.515e-15 Identity = 41/98 (41.84%), Postives = 63/98 (64.29%), Query Frame = 3 Query: 537 YDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 +D I GL ++ E+ E+++ +K+P + +G P+GV+LYGPPGTGKTLLA+AVA F + +GS +G G++ VR+LF A++ AP I Sbjct: 227 FDNIAGLQEEKHELLEIVDY-LKNPLKYAQMGARSPRGVILYGPPGTGKTLLAKAVAGEAGVPFFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPCI 323
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: SPAST_CAEBR (Probable spastin homolog spas-1 OS=Caenorhabditis briggsae GN=spas-1 PE=3 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.979e-15 Identity = 47/119 (39.50%), Postives = 69/119 (57.98%), Query Frame = 3 Query: 486 VDPLVNLMKVEKVPDST---YDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQP-KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 VD + ++++ DST D + G ++E + LP +P LF G+ QP KG+LL+GPPG GKTLLA+AVA + F +S S L K++G+ + +R LF +AR PSI Sbjct: 248 VDKAIGERLLDEILDSTGVRMDDVAGCHSAKATLEEAVILPALNPNLFS--GLRQPVKGILLFGPPGNGKTLLAKAVAGESKQMFFNISASSLTSKWVGDSEKTIRGLFQIARNGQPSI 364
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: FTSHB_ARATH (Cell division protease ftsH homolog 11, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=FTSH11 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.979e-15 Identity = 44/99 (44.44%), Postives = 62/99 (62.63%), Query Frame = 3 Query: 534 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 T+ + G D +E++EV+E +K+P F LG PKG+LL G PGTGKTLLA+A+A F +GSE + ++G G+R VR LF A++ AP I Sbjct: 360 TFKDVKGCDDAKQELEEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCI 457
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: SPA5L_XENTR (Spermatogenesis-associated protein 5-like protein 1 OS=Xenopus tropicalis GN=spata5l1 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.376e-15 Identity = 35/87 (40.23%), Postives = 57/87 (65.52%), Query Frame = 3 Query: 537 YDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVREL 797 ++ IGGL+ ++++ IE P+K+PE F +G+ PKGVLLYGPPG KT L +AVA C+F +S ++L Y+G+ + + ++ Sbjct: 456 WEHIGGLEDIKHKLRQSIEWPMKYPEAFSRMGLTPPKGVLLYGPPGCAKTTLVKAVATSCHCSFFSISAADLFSPYVGDSEKTLAQV 542 HSP 2 Score: 77.411 bits (189), Expect = 1.086e-13 Identity = 40/103 (38.83%), Postives = 57/103 (55.34%), Query Frame = 3 Query: 519 KVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS 827 K+ ++ + +D +KE+I +P+ +PE LG+ PKGVLL GPPG GKTLL +AVA I +SG + GE +R++F ARE A S Sbjct: 184 KLQEAPQLKVAAMDDTCASLKEIIHMPLHYPETMHKLGLPCPKGVLLIGPPGVGKTLLVKAVAREVGAYVIGLSGPAIHGSRPGESEENLRKIFEKAREAACS 286 The following BLAST results are available for this feature:
BLAST of CX069560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 366
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069560 ID=CX069560; Name=CX069560; organism=Citrus sinensis; type=EST; length=832bpback to top |