CX069560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: SPG7_RAT (Paraplegin OS=Rattus norvegicus GN=Spg7 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.086e-13 Identity = 42/99 (42.42%), Postives = 58/99 (58.59%), Query Frame = 3 Query: 534 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 ++ + G+ + E++E ++ +K PE F LG PKG LL GPPG GKTLLA+AVA F+ ++G E V+ G G+ VR LF AR AP I Sbjct: 307 SFQDVAGMHEAKLEVREFVDY-LKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCI 404
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: SPG7_MOUSE (Paraplegin OS=Mus musculus GN=Spg7 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.086e-13 Identity = 42/99 (42.42%), Postives = 58/99 (58.59%), Query Frame = 3 Query: 534 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 ++ + G+ + E++E ++ +K PE F LG PKG LL GPPG GKTLLA+AVA F+ ++G E V+ G G+ VR LF AR AP I Sbjct: 307 SFQDVAGMHEAKLEVREFVDY-LKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCI 404
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: FIGN_HUMAN (Fidgetin OS=Homo sapiens GN=FIGN PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 1.086e-13 Identity = 40/102 (39.22%), Postives = 60/102 (58.82%), Query Frame = 3 Query: 525 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 P ++ I GLD IKE + P+ + F L A P+ +LL+GP GTGKTLL R +A TF +++GS LV K++GE +++ F++AR PS+ Sbjct: 481 PPVDWNDIAGLDLVKAVIKEEVLWPVLRSDAFSGL-TALPRSILLFGPRGTGKTLLGRCIASQLGATFFKIAGSGLVAKWLGEAEKIIHASFLVARCRQPSV 581
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: SPG7_HUMAN (Paraplegin OS=Homo sapiens GN=SPG7 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.418e-13 Identity = 42/95 (44.21%), Postives = 56/95 (58.95%), Query Frame = 3 Query: 546 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 + G+ + E++E ++ +K PE F LG PKG LL GPPG GKTLLA+AVA F+ ++G E V+ G G+ VR LF AR AP I Sbjct: 311 VAGMHEAKLEVREFVDY-LKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCI 404
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: NSF2_DROME (Vesicle-fusing ATPase 2 OS=Drosophila melanogaster GN=Nsf2 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 9.193e-13 Identity = 40/92 (43.48%), Postives = 55/92 (59.78%), Query Frame = 3 Query: 546 IGGLDQQIKEI-KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR-VSGSELVQKYIGEGSRMVRELFVMARE 815 IGGLD++ I + + PEL E LGI KG+LLYGPPGTGKTL+AR + + + V+G +++ KY+GE +R LF A E Sbjct: 225 IGGLDKEFNAIFRRAFASRVFPPELVEQLGIKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEANIRRLFAEAEE 316
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PEX1_SCHPO (Peroxisomal ATPase pex1 OS=Schizosaccharomyces pombe GN=pex1 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.201e-12 Identity = 34/95 (35.79%), Postives = 58/95 (61.05%), Query Frame = 3 Query: 546 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 I G+ + + ++++IE P+K+ +++ + P G+LL+G PG GKT LA A++ FI + G EL+ KYIG+ + VR+LF A+ P + Sbjct: 608 IAGMQEAKEAVRDIIESPVKYSLIYKQCRLRLPTGILLFGYPGCGKTYLASAISSTFPVQFISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPCV 702
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PEX1_YEAST (Peroxisomal ATPase PEX1 OS=Saccharomyces cerevisiae GN=PEX1 PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.568e-12 Identity = 41/108 (37.96%), Postives = 58/108 (53.70%), Query Frame = 3 Query: 507 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 +K+ K + + IG L + E +E P K+ +F + + G+LLYG PG GKTLLA AVA FI V G E++ K+IG + +RELF A+ P I Sbjct: 686 VKLTKETNIKWGDIGALANAKDVLLETLEWPTKYEPIFVNCPLRLRSGILLYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVKPCI 793
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: NSF1_DROME (Vesicle-fusing ATPase 1 OS=Drosophila melanogaster GN=comt PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.048e-12 Identity = 40/92 (43.48%), Postives = 54/92 (58.70%), Query Frame = 3 Query: 546 IGGLDQQIKEI-KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR-VSGSELVQKYIGEGSRMVRELFVMARE 815 IGGLD++ I + + PEL E LG KG+LLYGPPGTGKTL+AR + + + V+G +++ KY+GE VR LF A E Sbjct: 220 IGGLDKEFNSIFRRAFASRVFPPELVEQLGCKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEANVRRLFAEAEE 311
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: NSF_RAT (Vesicle-fusing ATPase OS=Rattus norvegicus GN=Nsf PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.493e-12 Identity = 40/101 (39.60%), Postives = 59/101 (58.42%), Query Frame = 3 Query: 525 PDSTYDM--IGGLDQQIKEI-KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR-VSGSELVQKYIGEGSRMVRELFVMARE 815 PD ++ IGGLD++ +I + + PE+ E +G KG+LLYGPPG GKTLLAR + + + V+G E++ KY+GE +R+LF A E Sbjct: 211 PDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEE 311
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: NSF_PONAB (Vesicle-fusing ATPase OS=Pongo abelii GN=NSF PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.493e-12 Identity = 40/101 (39.60%), Postives = 59/101 (58.42%), Query Frame = 3 Query: 525 PDSTYDM--IGGLDQQIKEI-KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR-VSGSELVQKYIGEGSRMVRELFVMARE 815 PD ++ IGGLD++ +I + + PE+ E +G KG+LLYGPPG GKTLLAR + + + V+G E++ KY+GE +R+LF A E Sbjct: 211 PDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEE 311 The following BLAST results are available for this feature:
BLAST of CX069560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 366
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069560 ID=CX069560; Name=CX069560; organism=Citrus sinensis; type=EST; length=832bpback to top |