CX069559
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: TBP7_CAEEL (TAT-binding homolog 7 OS=Caenorhabditis elegans GN=lex-1 PE=1 SV=3) HSP 1 Score: 145.206 bits (365), Expect = 4.852e-34 Identity = 89/232 (38.36%), Postives = 128/232 (55.17%), Query Frame = -3 Query: 207 PKGVLLYGPPGTGKTLLARAVAHH-----TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGI--DLKKIAEKMNGASGAELKAVCTEAGMFALRER--RIHVTQEDFEMAVAKVMKKETEKNMSLRKL 875 PKGV+ YGPPGTGKTL+ARA+A+ F G++ + K++GE R +R LF A PSIIF DEID + R S D + LL +DG + ++ V+ ATNR+D LD AL RPGR DR++ F P+ +R IL IH+ + + I L IAE+ +G GA+LK +CTEA + LR R I++ E ++ VA + ++R++ Sbjct: 425 PKGVVFYGPPGTGKTLVARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVR----SSKQDQIHASIVSTLLALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQILDIHTSKWEENKPIPETLDAIAERTSGYCGADLKFLCTEAVLIGLRSRYPHIYMCSERLKLDVATIKITSEHFGHAMRRI 652
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PEX1_YEAST (Peroxisomal ATPase PEX1 OS=Saccharomyces cerevisiae GN=PEX1 PE=1 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 1.081e-33 Identity = 83/192 (43.23%), Postives = 111/192 (57.81%), Query Frame = -3 Query: 321 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILK---------IHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEA 869 G+LLYG PG GKTLLA AVA FI V G E++ K+IG + +RELF A+ P I+F DE DSI R +G D R + +LL Q+DG E + + +L AT+R D++D ALLRPGR+D+ + P E RLDIL+ ++ L + DLK IAEK G SGA+L+ +C A Sbjct: 733 GILLYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVKPCILFFDEFDSIAPKRGHDSTGVTD----RVVNQLLTQMDGAEGLDGVYILAATSRPDLIDSALLRPGRLDKSVICNIPTESERLDILQAIVNSKDKDTGQKKFALEKNADLKLIAEKTAGFSGADLQGLCYNA 920
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: TBP7_CAEBR (TAT-binding homolog 7 OS=Caenorhabditis briggsae GN=lex-1 PE=3 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 2.408e-33 Identity = 88/232 (37.93%), Postives = 127/232 (54.74%), Query Frame = -3 Query: 207 PKGVLLYGPPGTGKTLLARAVAHH-----TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRM--NLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRER--RIHVTQEDFEMAVAKVMKKETEKNMSLRKL 875 PKGV+ YGPPGTGKTL+ARA+A+ F G++ + K++GE R +R LF A PSIIF DEID + R S D + LL +DG + ++ V+ ATNR+D LD AL RPGR DR++ F P+ +R IL IH+ + N L IAEK +G GA+LK +CTE+ + LR R I++ E ++ + + E ++R++ Sbjct: 439 PKGVVFYGPPGTGKTLVARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVR----SSKQDQIHASIVSTLLALMDGLDGRGEVVVIGATNRLDSLDPALRRPGRFDRELRFSLPDLNARRHILDIHTSKWEENKPTPETLDGIAEKTSGYCGADLKFLCTESVLIGLRSRYPHIYMCSERLKLDITTIKITEEHFGHAMRRI 666
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PEX1_DICDI (Peroxisome biogenesis factor 1 OS=Dictyostelium discoideum GN=pex1 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.408e-33 Identity = 85/217 (39.17%), Postives = 120/217 (55.30%), Query Frame = -3 Query: 219 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMS 869 G+LLYGP G GKTLLA A+A FI V G EL+ KYIG + VR++F A P ++F DE DSI R SG D R + + L QLDG E + VL AT+R D++D ALLRPGR+D+ + P RLDIL +MNL I L++++ +GA+L+A+ A + ++ E H+ +E + K + ++ KN S Sbjct: 902 GILLYGPTGCGKTLLASAIAGECGLNFISVKGPELLNKYIGSSEQGVRDVFSRASSAKPCVLFFDEFDSIAPRRGHDNSGVTD----RVVNQFLTQLDGVEGLTGVYVLAATSRPDLIDPALLRPGRLDKSLYCNIPEFNERLDILTCLKSKMNLSPSISLEQLSTNTQYYTGADLRALMYNAQLKSIHEWMNHLEEE--KKRKRKEKEDQSNKNSS 1112
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: NVL_HUMAN (Nuclear valosin-containing protein-like OS=Homo sapiens GN=NVL PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.408e-33 Identity = 88/235 (37.45%), Postives = 134/235 (57.02%), Query Frame = -3 Query: 225 LNPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKI---HSRRMNLMRGIDLKKIAE--KMNGASGAELKAVCTEAGMFALRER-----------RIHVTQEDFEMAVAKVMKKETEKN 881 + P GVLL GPPG GKTLLA+AVA+ + FI V G EL+ Y+GE R VR++F A+ AP +IF DE+D++ R + +G R + +LL ++DG EA ++ ++ ATNR DI+D A+LRPGR+D+ + P RL ILK + + L ++L+ IA + + +GA+L A+ EA + ALR+ + V+ + FE A KV ++K+ Sbjct: 613 VTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGAS----VRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKVSHKHFEEAFKKVRSSISKKD 843 HSP 2 Score: 136.346 bits (342), Expect = 2.254e-31 Identity = 79/190 (41.58%), Postives = 114/190 (60.00%), Query Frame = -3 Query: 306 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFAL 875 P+GVLL+GPPG GKTLLA A+A D ++V+ E+V GE + +RELF A +AP IIF+DEID+I + + E S + + + +L ++ L+ A+ ++ V+ ATNR D LD AL R GR DR+I P+E SR IL+ R++ L + D +A G GA+L A+C EA M A+ Sbjct: 298 PRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAI-TPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAV 486
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: YME1_SCHMA (Protein YME1 homolog OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 3.145e-33 Identity = 74/189 (39.15%), Postives = 119/189 (62.96%), Query Frame = -3 Query: 309 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFA 875 PKGVLL GPPG GKTLLA+AV+ F+ SGS + +G G+ +R+LF A++++P ++F+DEIDS+G R S +T+ +LL ++DGF++ I VL ATN+ ++LD+ALLRPGR D +I P E R+ +L ++ +++ ID++K+A G +GA+++ + +A + A Sbjct: 199 PKGVLLVGPPGVGKTLLAKAVSGEAQVPFLYASGSSFDEVLVGLGASRIRQLFTTAKQNSPCLVFIDEIDSVGGNRTFSPH---HPFANQTINQLLAEMDGFQSKEGIIVLGATNQAEVLDKALLRPGRFDVQIHVSPPTYEGRIALLNLYLKKVKTGSNIDIEKLAHGTVGYTGADIQNLVNQAAIAA 384
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: KTNA1_ARATH (Katanin p60 ATPase-containing subunit OS=Arabidopsis thaliana GN=AAA1 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 3.145e-33 Identity = 96/256 (37.50%), Postives = 142/256 (55.47%), Query Frame = -3 Query: 183 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFE--ASNK------IKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQE------------------DFEMAVAKVMKKETEKNMSLRKLWK*SFPCA 872 KGVL++GPPGTGKTLLA+AVA TF VS + L K+ GE RMVR LF +AR +APS IF+DEIDS+ ++R GSG +S +R ELL Q+DG A+N+ + VL ATN +D+AL R R++++I P P+ ESR ++ I+ R + + ++++ +A + G SG +L VC +A M +R + T++ DFE A+ KV + ++ + W F A Sbjct: 273 KGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSR--GGSGEHESS-RRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRR--RLEKRIYIPLPDFESRKALININLRTVEVASDVNIEDVARRTEGYSGDDLTNVCRDASMNGMRRKIAGKTRDEIKNMSKDDISNDPVAMCDFEEAIRKVQPSVSSSDIEKHEKWLSEFGSA 523
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: TBP7_YEAST (TAT-binding homolog 7 OS=Saccharomyces cerevisiae GN=YTA7 PE=1 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 4.108e-33 Identity = 83/231 (35.93%), Postives = 138/231 (59.74%), Query Frame = -3 Query: 207 PKGVLLYGPPGTGKTLLARAVA-----HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGID-LKKIAEKMNGASGAELKAVCTEAGMFALRER--RIHVTQEDFEMAVAKVMKKETEKNMSLRKL 875 P+GVL +GPPGTGKTL+ARA+A TF G++++ K++GE R +R LF A++H PSIIF DEID + R S + + T+L L+ DG + ++ V+ ATNR D +D AL RPGR DR+ FP P+ ++R IL+I +R+ + + + K+A G GA+L+++CTEA + +++ +I+ + + + +K+ K ++ ++L+K+ Sbjct: 447 PRGVLFHGPPGTGKTLMARALAASCSSDERKITFFMRKGADILSKWVGEAERQLRLLFEEAKKHQPSIIFFDEIDGLAPVR-SSKQEQIHASIVSTLLALM---DGMDNRGQVIVIGATNRPDAVDPALRRPGRFDREFYFPLPDVKARFKILQIQTRKWSSPLSTNFIDKLAFLTKGYGGADLRSLCTEAALISIQRSFPQIYRSNDKLLVDPSKIKVKVSDFMLALKKI 673
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: SPAST_IXOSC (Spastin OS=Ixodes scapularis GN=spas PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 5.365e-33 Identity = 86/243 (35.39%), Postives = 137/243 (56.38%), Query Frame = -3 Query: 192 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLM--ATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDIL-KIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE------------RRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK*SF 875 PKG+LL+GPPG GKT+LA+AVAH ++ TF+ +S + L KY+GEG ++VR LF +ARE PSIIF+DE+DS+ S R + N +R E L + DG ++ +VL+ ATNR LD A LR R +++ P+ +R+ +L K+ + N + LK +A G SG++L A+ +A + +RE + +++ +DF ++ KV + T +++ W F Sbjct: 407 PKGLLLFGPPGNGKTMLAKAVAHESNSTFLNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLSERKD----NEHEATRRLKTEFLVEFDGLHTGSEERVLVMGATNRPQELDDAALR--RFTKRVYVTLPDHNTRVILLEKLLKKHNNPLSADKLKYLARLTEGYSGSDLTALAKDAALGPIRELNPEQVRCVDPKKMRNISLQDFLDSLKKVRRSVTPQSLDFFDRWNREF 643
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: NVL_MOUSE (Nuclear valosin-containing protein-like OS=Mus musculus GN=Nvl PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 7.007e-33 Identity = 86/225 (38.22%), Postives = 128/225 (56.89%), Query Frame = -3 Query: 249 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKI---HSRRMNLMRGIDLKKIAE--KMNGASGAELKAVCTEAGMFALRER-----------RIHVTQEDFEMAVAKV 875 P G+LL GPPG GKTLLA+AVA+ + FI V G EL+ Y+GE R VR++F A+ AP +IF DE+D++ R + +G R + +LL ++DG E ++ +L ATNR DI+D A+LRPGR+D+ + P R+ ILK + + L ++L+ IA + N +GA+L A+ EA + ALR+ + V+ + FE A KV Sbjct: 614 PAGILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGAS----VRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDEDVNLETIANDLRCNCYTGADLTALVREASLCALRQEITAQKNGVGAGELKVSHKHFEDAFKKV 834 HSP 2 Score: 130.954 bits (328), Expect = 9.470e-30 Identity = 75/190 (39.47%), Postives = 113/190 (59.47%), Query Frame = -3 Query: 306 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFAL 875 P+GVLL+GPPG GKTLLA A+A D ++V+ E+V GE + +RELF A +AP I+F+DEID+I + + E S + + + +L ++ L+ A+ ++ V+ ATNR D LD AL R GR DR++ P+E +R IL+ R++ L + +A G GA+L A+C EA M A+ Sbjct: 297 PRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAI-TPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEAARERILQTLCRKLRLPETFNFCHLAHLTPGFVGADLMALCREAAMCAV 485 The following BLAST results are available for this feature:
BLAST of CX069559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 389
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069559 ID=CX069559; Name=CX069559; organism=Citrus sinensis; type=EST; length=907bpback to top |