CX069559
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 4.646e-69 Identity = 135/211 (63.98%), Postives = 163/211 (77.25%), Query Frame = -3 Query: 243 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 875 PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR I+F DE+D+IG AR + G G GD+EVQRTMLE++NQLDGF+A IKVLMATNR D LD ALLRPGR+DRK+EF P+ E R I KIH+R MN R I + +A ++GA++++VCTEAGM+A+R RR VT++DF AV KV+K Sbjct: 202 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG-GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIK 411
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 4.646e-69 Identity = 135/211 (63.98%), Postives = 163/211 (77.25%), Query Frame = -3 Query: 243 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 875 PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR I+F DE+D+IG AR + G G GD+EVQRTMLE++NQLDGF+A IKVLMATNR D LD ALLRPGR+DRK+EF P+ E R I KIH+R MN R I + +A ++GA++++VCTEAGM+A+R RR VT++DF AV KV+K Sbjct: 202 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG-GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIK 411
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 6.067e-69 Identity = 129/216 (59.72%), Postives = 174/216 (80.56%), Query Frame = -3 Query: 228 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEK 875 PKG+LLYGPPGTGKTLLA+AVA T+ TFIRV GSELV+K+IGEG+ +V+++F +A+E APSIIF+DEID+I + R ++ +G GD EVQRT+++LL ++DGF+A +K++ ATNR DILD A+LRPGR DR IE P P+E+ RL+ILKIH+R+MNL ++L++IA+ G GAELKA+CTEAGM A+RE R +VT +DF AV K+M+K+ K Sbjct: 204 PKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTG-GDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIMEKKKVK 418
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PRS7_PONAB (26S protease regulatory subunit 7 OS=Pongo abelii GN=PSMC2 PE=2 SV=3) HSP 1 Score: 260.766 bits (665), Expect = 7.924e-69 Identity = 136/211 (64.45%), Postives = 164/211 (77.73%), Query Frame = -3 Query: 243 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 875 PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+IG AR + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DRKIEF P+ E R ILKIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R RR T++DF AV KV+K Sbjct: 209 PKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHILKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIK 418
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PRS4_CAEEL (Probable 26S protease regulatory subunit 4 OS=Caenorhabditis elegans GN=rpt-2 PE=2 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 7.924e-69 Identity = 127/215 (59.07%), Postives = 173/215 (80.47%), Query Frame = -3 Query: 231 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 875 PKGV+LYG PGTGKTLLA+AVA+ T TF+R+ GSEL+QKY+G+G +MVRELF +A E+APSI+F+DEID++G+ R +S SG G+ E+QRTMLELLNQLDGF++ +KVLMATNRI+ LD AL+RPGRIDRKIEFP P+E+++ I +IH+ RM L + ++L++ + SGA++KA+CTEAG+ ALRERR+ VT EDF+ + V+ ++ E Sbjct: 222 PKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQKSKENVLYRKKE 435
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PRS7_XENLA (26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 2.306e-68 Identity = 135/211 (63.98%), Postives = 163/211 (77.25%), Query Frame = -3 Query: 243 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 875 PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+IG AR + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DRKIEF P+ E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R RR T++DF AV KV+K Sbjct: 209 PKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVNKVIK 418
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PRS7_MOUSE (26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1 SV=5) HSP 1 Score: 259.225 bits (661), Expect = 2.306e-68 Identity = 135/211 (63.98%), Postives = 163/211 (77.25%), Query Frame = -3 Query: 243 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 875 PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+IG AR + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DRKIEF P+ E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R RR T++DF AV KV+K Sbjct: 209 PKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIK 418
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PRS7_MACFA (26S protease regulatory subunit 7 OS=Macaca fascicularis GN=PSMC2 PE=2 SV=3) HSP 1 Score: 259.225 bits (661), Expect = 2.306e-68 Identity = 135/211 (63.98%), Postives = 163/211 (77.25%), Query Frame = -3 Query: 243 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 875 PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+IG AR + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DRKIEF P+ E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R RR T++DF AV KV+K Sbjct: 209 PKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIK 418
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PRS7_HUMAN (26S protease regulatory subunit 7 OS=Homo sapiens GN=PSMC2 PE=1 SV=3) HSP 1 Score: 259.225 bits (661), Expect = 2.306e-68 Identity = 135/211 (63.98%), Postives = 163/211 (77.25%), Query Frame = -3 Query: 243 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 875 PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+IG AR + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DRKIEF P+ E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R RR T++DF AV KV+K Sbjct: 209 PKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIK 418
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PRS7_BOVIN (26S protease regulatory subunit 7 OS=Bos taurus GN=PSMC2 PE=2 SV=3) HSP 1 Score: 259.225 bits (661), Expect = 2.306e-68 Identity = 135/211 (63.98%), Postives = 163/211 (77.25%), Query Frame = -3 Query: 243 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 875 PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+IG AR + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DRKIEF P+ E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R RR T++DF AV KV+K Sbjct: 209 PKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIK 418 The following BLAST results are available for this feature:
BLAST of CX069559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 389
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069559 ID=CX069559; Name=CX069559; organism=Citrus sinensis; type=EST; length=907bpback to top |