CX069559
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: VPS4_SCHPO (Suppressor protein of bem1/bed5 double mutants OS=Schizosaccharomyces pombe GN=vps4 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 6.138e-29 Identity = 82/197 (41.62%), Postives = 123/197 (62.44%), Query Frame = -3 Query: 288 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTM-LELLNQLDGF-EASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRM-NLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIH 869 G+LLYGPPGTGK+ LA+AVA TF +S S+LV K++GE R+VR+LF MARE PSIIF+DEIDS+ +R E G+SE R + E L Q++G + + + VL ATN LD A+ R R +++I P PN +R + +++ ++ + + D K++A+ +G SG+++ V +A M + RRIH Sbjct: 164 GILLYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSIIFIDEIDSLCGSRSE-----GESESSRRIKTEFLVQMNGVGKDESGVLVLGATNIPWTLDSAIRR--RFEKRIYIPLPNAHARARMFELNVGKIPSELTSQDFKELAKMTDGYSGSDISIVVRDAIMEPV--RRIH 351
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PEX6_ASHGO (Peroxisomal biogenesis factor 6 OS=Ashbya gossypii GN=PEX6 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 6.138e-29 Identity = 76/191 (39.79%), Postives = 111/191 (58.12%), Query Frame = -3 Query: 306 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFE-ASNKIKVLMATNRIDILDQALLRPGRIDRKIEFP-NPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGA-SGAELKAVCTEAGMFAL 869 G+L YGPPGTGKTLLA+AVA + F V G EL+ YIGE VR +F AR+ P +IF DE+DS+ R G G + R + +LL +LDG + + V+ ATNR D+LD+ALLRPGR D+ + + E + +IL+ +R+ L + L +A +GA+ A+C++A + A+ Sbjct: 758 GILFYGPPGTGKTLLAKAVATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSVAPKRGNQGDSGG--VMDRIVSQLLAELDGLSTGGDGLFVIGATNRPDLLDEALLRPGRFDKLLYLGISDTNEKQANILRALTRKFTLDPDVSLDDLAASCPFTYTGADFYALCSDAMLNAM 946
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PEX6_YARLI (Peroxisomal biogenesis factor 6 OS=Yarrowia lipolytica GN=PEX6 PE=3 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 1.367e-28 Identity = 73/192 (38.02%), Postives = 112/192 (58.33%), Query Frame = -3 Query: 306 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS--NKIKVLMATNRIDILDQALLRPGRIDRKIEFP-NPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGA-SGAELKAVCTEAGMFAL 869 G+L YGPPGTGKTLLA+A+A F V G EL+ YIGE VR +F AR+ P ++F DE+DS+ R G G + R + +LL +LDG + + V+ ATNR D+LD+ALLRPGR D+ + + E + I++ +R+ L + L+ I+++ +GA+ A+C++A + A+ Sbjct: 754 GILFYGPPGTGKTLLAKAIATTFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVVFFDELDSVAPQRGNQGDSGG--VMDRIVSQLLAELDGMSTAGGEGVFVVGATNRPDLLDEALLRPGRFDKMLYLGISDTHEKQQTIMEALTRKFRLAADVSLEAISKRCPFTFTGADFYALCSDAMLNAM 943
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: SPAST_BRUMA (Probable spastin homolog Bm1_53365 OS=Brugia malayi GN=Bm1_53365 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.786e-28 Identity = 94/243 (38.68%), Postives = 140/243 (57.61%), Query Frame = -3 Query: 201 KGVLLYGPPGTGKTLLARAVAHHTDCT-FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTM-LELLNQLDGFEAS--NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILK--IHSRRMNLMRGIDLKKI-AEKMNGASGAELKAVCTEAGMFALRE------------RRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 872 +G+LL+GPPG GKTLLARAVA T F+ VS + L K++G+ ++VR LF +AR P+IIF+DEIDSI R E ++EV R M E L Q+DG +S +++ V+ ATNR + LD A+LR R ++I PN +RL ++ + + + G+ ++I AE +G S ++L A+C EA M +R+ +T DFE+A+ K +K T + M L+KL K Sbjct: 212 QGILLFGPPGNGKTLLARAVAGECGSTMFLNVSAASLTSKWVGDAEKIVRALFQIARNGQPTIIFIDEIDSILCERNEK-----ETEVSRRMKTEFLIQMDGMLSSKDDRLLVIGATNRPEELDSAILR--RFPKRILIDVPNAAARLKLIMSLLEKTKTSFDLGLTQRQILAEWTHGYSNSDLVALCREAAMVPIRDLSRKDIKNLVSTELRPITLRDFEIAM-KAIKPSTNERM-LQKLRK 445
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PEX6_CANGA (Peroxisomal biogenesis factor 6 OS=Candida glabrata GN=PEX6 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.786e-28 Identity = 72/191 (37.70%), Postives = 111/191 (58.12%), Query Frame = -3 Query: 306 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEA-SNKIKVLMATNRIDILDQALLRPGRIDRKIEFP-NPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMN-GASGAELKAVCTEAGMFAL 869 G+L YGPPGTGKTLLA+A+A + F V G EL+ YIGE VR +F AR+ P +IF DE+DS+ R G G + R + +LL +LDG + + + ++ ATNR D+LD+ALLRPGR D+ I E + +I++ +R+ + I+ ++ +GA+ A+C++A + A+ Sbjct: 753 GILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDEVDSVAPKRGNQGDSGG--VMDRIVSQLLAELDGMSSDGDGVFIIGATNRPDLLDEALLRPGRFDKLIYLGIADTREKQANIMRALTRKFKVSSDINFDELVSDFPFSYTGADFYALCSDAMLKAM 941
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: ATD1A_DANRE (ATPase family AAA domain-containing protein 1-A OS=Danio rerio GN=atad1a PE=2 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.786e-28 Identity = 79/223 (35.43%), Postives = 125/223 (56.05%), Query Frame = -3 Query: 207 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKL 875 PKGVLLYGPPG GKTL+A+A A + C FI + S L K+ GE ++ +F +A + P IIF+DEIDS R S + ++ + L + LD E ++++ V+ ATNR +D A+LR R+ PN R +IL++ NL I+LK+IA + G SG++LK +C +A M+ +R+ +V ++ + + E E+++ R+L Sbjct: 129 PKGVLLYGPPGCGKTLIAKATAKASGCRFINLQASTLTDKWYGESQKLTAAVFSLAVKIQPCIIFLDEIDSFLRNR-SSMDHEATAMMKAQFMSLWDGLDTGE-NSQVMVMGATNRPQDVDAAILR--RMPTAFHVGLPNAAQREEILRLILSGENLSNAINLKEIASQSEGYSGSDLKELCRDAAMYRVRD---YVRKQQMKQIAQQFQLDEEEEHVDSRQL 344
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: VPS4B_HUMAN (Vacuolar protein sorting-associated protein 4B OS=Homo sapiens GN=VPS4B PE=1 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 2.332e-28 Identity = 76/194 (39.18%), Postives = 115/194 (59.28%), Query Frame = -3 Query: 300 KGVLLYGPPGTGKTLLARAVAHHTD-CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK-IKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIH-SRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 872 +G+LL+GPPGTGK+ LA+AVA + TF +S S+LV K++GE ++V+ LF +ARE+ PSIIF+DEIDS+ +R E N +R E L Q+ G N I VL ATN +LD A+ R R +++I P P +R + K+H N + D +++ K +G SGA++ + +A M +R+ Sbjct: 168 RGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSE----NESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPVRK 355
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: SPA5L_XENTR (Spermatogenesis-associated protein 5-like protein 1 OS=Xenopus tropicalis GN=spata5l1 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.332e-28 Identity = 74/193 (38.34%), Postives = 109/193 (56.48%), Query Frame = -3 Query: 306 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHA---PSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFAL 875 PKGVLL GPPG GKTLL +AVA I +SG + GE +R++F ARE A P+++F+DE+D++ R S S + R + +LL +DG ++ NK+ + AT+R D +D AL RPGR DR++ P + R IL++ M R +D +A+ G GA+L A+C +A M A+ Sbjct: 225 PKGVLLIGPPGVGKTLLVKAVAREVGAYVIGLSGPAIHGSRPGESEENLRKIFEKAREAACSGPALLFIDEVDALCPKRGHSNS----APENRVVAQLLTLMDGIDSDNKMVTVAATSRPDAIDPALRRPGRFDREVIIGTPTHKQRQAILEMMISNMPTDRDVDAAALADVTVGYVGADLTALCRDAAMQAV 413
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: FTSHC_ARATH (Cell division protease ftsH homolog 12, chloroplastic OS=Arabidopsis thaliana GN=FTSH12 PE=2 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 2.332e-28 Identity = 77/228 (33.77%), Postives = 120/228 (52.63%), Query Frame = -3 Query: 216 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDG---------FEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSL 872 +GVLL GPPGTGKTL AR +A + F+ SG+E G+ + E+F +AR +AP+ +F+DEID+I D + T L+ QLDG F + + ATNR D LD +R GRIDR++ P+ + R+ I +HS NL ID K+ + G SGA+++ + EA + ++R+ R ++ Q+D + V+ K+ + M + Sbjct: 527 RGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSE-KSGAAKINEMFSIARRNAPAFVFVDEIDAIAGRHARK-----DPRRRATFEALIAQLDGEKEKTGIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYIGLPDAKQRVQIFGVHSAGKNLAEDIDFGKLVFRTVGFSGADIRNLVNEAAIMSVRKGRSYIYQQD----IVDVLDKQLLEGMGV 744
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: MSP1_CAEEL (Mitochondrial sorting homolog OS=Caenorhabditis elegans GN=mspn-1 PE=1 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 3.046e-28 Identity = 78/221 (35.29%), Postives = 119/221 (53.85%), Query Frame = -3 Query: 243 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS-NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR---------ERRIHVTQEDFEMAVAKVMK 875 P+G+LLYGPPG GKTLLA+AVA C FI + S L K+ GE ++ +F +A++ P+IIF+DEIDS + + + + DGF +S ++I V+ ATNR +D A+LR R+ + + P PN + R IL + R + ++L +IA+ G SG++LK VC A + + + + + Q DFE AV K M+ Sbjct: 117 PRGILLYGPPGCGKTLLAKAVARAAGCRFINLQVSNLTDKWYGESQKLAAAVFSVAQKFQPTIIFIDEIDSF----LRDRQSHDHESTAMMKAQFMTLWDGFSSSGDQIIVMGATNRPRDVDAAILR--RMTARFQVPVPNAKQRSQILNVILRNEKINNTVNLGEIAQAAEGLSGSDLKEVCRLALLARAKATVASGGSVNQLLPLEQSDFESAVHKYMR 331 The following BLAST results are available for this feature:
BLAST of CX069559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 389
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069559 ID=CX069559; Name=CX069559; organism=Citrus sinensis; type=EST; length=907bpback to top |