CX069538

Overview
NameCX069538
Unique NameCX069538
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069538 vs. ExPASy Swiss-Prot
Match: ATG8F_ARATH (Autophagy-related protein 8f OS=Arabidopsis thaliana GN=ATG8F PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 7.167e-52
Identity = 98/118 (83.05%), Postives = 110/118 (93.22%), Query Frame = -1
Query:   89 MAKSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFGW 442
            MAKSSFK EH LE+R AE+ARIREKYPDRIPVIVEKAEK+D+P IDKKKYLVPADL+VGQFVYV+RKRIKLSAEKAIF+FV N LPP GALMS++YEE KD+DGFLY+TYSGENTFG+
Sbjct:    1 MAKSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFGF 118          
BLAST of CX069538 vs. ExPASy Swiss-Prot
Match: ATG8_PHYIN (Autophagy-related protein 8 OS=Phytophthora infestans GN=ATG8 PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.399e-47
Identity = 90/114 (78.95%), Postives = 101/114 (88.60%), Query Frame = -1
Query:   92 SSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 433
            SSFK EHP E+R AE+ RIR KYPDRIPVI EKA+++D+PDIDKKKYLVPADL+VGQFVYV+RKRIKLS EKAIF+F+ N LPPT ALMS IYEE KD DGFLY+TYSGENTFG
Sbjct:    2 SSFKKEHPFEKRQAEAQRIRSKYPDRIPVICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDVDGFLYITYSGENTFG 115          
BLAST of CX069538 vs. ExPASy Swiss-Prot
Match: ATG8G_ARATH (Autophagy-related protein 8g OS=Arabidopsis thaliana GN=ATG8G PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.827e-47
Identity = 89/119 (74.79%), Postives = 107/119 (89.92%), Query Frame = -1
Query:   86 MAKSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFGWS 442
            M+  SF+ +H  E+R AE+ RIREKY DR+PVIVEK+EK+D+P+IDKKKYLVPADL+VGQFVYV+RKRI+LSAEKAIF+FV N LPPTGA+MS IY+ENK+EDGFLY+TYSGENTFG S
Sbjct:    1 MSNVSFRQDHDFEKRKAEALRIREKYSDRVPVIVEKSEKSDIPNIDKKKYLVPADLTVGQFVYVIRKRIQLSAEKAIFIFVDNVLPPTGAMMSTIYDENKEEDGFLYVTYSGENTFGSS 119          
BLAST of CX069538 vs. ExPASy Swiss-Prot
Match: ATG8E_ARATH (Autophagy-related protein 8e OS=Arabidopsis thaliana GN=ATG8E PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.116e-47
Identity = 90/116 (77.59%), Postives = 105/116 (90.52%), Query Frame = -1
Query:   86 SSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFGWS 433
            S FK++   E+R AE+ RIREKYPDRIPVIVEKAEK++VP+IDKKKYLVP+DL+VGQFVYV+RKRIKLSAEKAIF+FV N LPPTG LMS++YE+ KDEDGFLY+TYSGENTFG S
Sbjct:    5 SIFKMDDDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYITYSGENTFGAS 120          
BLAST of CX069538 vs. ExPASy Swiss-Prot
Match: ATG8_LACBI (Autophagy-related protein 8 OS=Laccaria bicolor GN=ATG8 PE=2 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 4.499e-46
Identity = 87/115 (75.65%), Postives = 102/115 (88.70%), Query Frame = -1
Query:   92 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 436
            +S FK EHP E+R AE+ RIR+KYPDRIPVI EKA++TD+P IDKKKYLVP+DL+VGQFVYV+RKRIKL+ EKAIF+FV   LPPT ALMSAIYEE+KDED FLY++YSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYPDRIPVICEKADRTDIPTIDKKKYLVPSDLTVGQFVYVIRKRIKLAPEKAIFIFVDEVLPPTAALMSAIYEEHKDEDNFLYVSYSGENTFG 116          
BLAST of CX069538 vs. ExPASy Swiss-Prot
Match: ATG8_YARLI (Autophagy-related protein 8 OS=Yarrowia lipolytica GN=ATG8 PE=3 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 5.876e-46
Identity = 87/115 (75.65%), Postives = 103/115 (89.57%), Query Frame = -1
Query:   92 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 436
            +S FK EHP E+R AE+ RIR+KY DR+PVI EK EK+D+P IDKKKYLVPADL+VGQFVYV+RKRIKLS+E+AIF+FV + LPPT ALMS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRRAEAERIRKKYDDRVPVICEKVEKSDIPVIDKKKYLVPADLTVGQFVYVIRKRIKLSSERAIFIFVDDVLPPTAALMSSIYEEHKDEDGFLYVTYSGENTFG 116          
BLAST of CX069538 vs. ExPASy Swiss-Prot
Match: ATG8_MAGGR (Autophagy-related protein 8 OS=Magnaporthe grisea GN=ATG8 PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.309e-45
Identity = 90/120 (75.00%), Postives = 104/120 (86.67%), Query Frame = -1
Query:   77 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFGWSF*E 436
            +S FK EHP E+R AE+ RIR+KY DRIPVI EK EK+D+  IDKKKYLVPADL+VGQFVYV+RKRIKLS EKAIF+FV++TLPPT ALMS+IYE +KDEDGFLY+TYSGENTFG  F E
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYTDRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVQDTLPPTAALMSSIYELHKDEDGFLYITYSGENTFGDLFEE 121          
BLAST of CX069538 vs. ExPASy Swiss-Prot
Match: ATG8_PODAN (Autophagy-related protein 8 OS=Podospora anserina GN=ATG8 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.710e-45
Identity = 88/115 (76.52%), Postives = 100/115 (86.96%), Query Frame = -1
Query:   92 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 436
            +S FK EHP E+R AE+ RIR+KY DRIPVI EK EK+D+  IDKKKYLVPADL+VGQFVYV+RKRIKLS EKAIF+FV   LPPT ALMS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
BLAST of CX069538 vs. ExPASy Swiss-Prot
Match: ATG8_PENCW (Autophagy-related protein 8 OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=atg8 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.710e-45
Identity = 88/115 (76.52%), Postives = 100/115 (86.96%), Query Frame = -1
Query:   92 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 436
            +S FK EHP E+R AE+ RIR+KY DRIPVI EK EK+D+  IDKKKYLVPADL+VGQFVYV+RKRIKLS EKAIF+FV   LPPT ALMS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
BLAST of CX069538 vs. ExPASy Swiss-Prot
Match: ATG8_NEUCR (Autophagy-related protein 8 OS=Neurospora crassa GN=atg-8 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.710e-45
Identity = 88/115 (76.52%), Postives = 100/115 (86.96%), Query Frame = -1
Query:   92 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 436
            +S FK EHP E+R AE+ RIR+KY DRIPVI EK EK+D+  IDKKKYLVPADL+VGQFVYV+RKRIKLS EKAIF+FV   LPPT ALMS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYSDRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
The following BLAST results are available for this feature:
BLAST of CX069538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
ATG8F_ARATH7.167e-5283.05Autophagy-related protein 8f OS=Arabidopsis thalia... [more]
ATG8_PHYIN1.399e-4778.95Autophagy-related protein 8 OS=Phytophthora infest... [more]
ATG8G_ARATH1.827e-4774.79Autophagy-related protein 8g OS=Arabidopsis thalia... [more]
ATG8E_ARATH3.116e-4777.59Autophagy-related protein 8e OS=Arabidopsis thalia... [more]
ATG8_LACBI4.499e-4675.65Autophagy-related protein 8 OS=Laccaria bicolor GN... [more]
ATG8_YARLI5.876e-4675.65Autophagy-related protein 8 OS=Yarrowia lipolytica... [more]
ATG8_MAGGR1.309e-4575.00Autophagy-related protein 8 OS=Magnaporthe grisea ... [more]
ATG8_PODAN1.710e-4576.52Autophagy-related protein 8 OS=Podospora anserina ... [more]
ATG8_PENCW1.710e-4576.52Autophagy-related protein 8 OS=Penicillium chrysog... [more]
ATG8_NEUCR1.710e-4576.52Autophagy-related protein 8 OS=Neurospora crassa G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_11B05_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11B05-D9-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069538 ID=CX069538; Name=CX069538; organism=Citrus sinensis; type=EST; length=796bp
TCTGGGAATGGCTTAAAAGGGATCAACTGAGAATATACAACTTTCAAATT
TTATGATACATGGCTTGTTGCCTTCGCTCTTAAAATGACCAACCGAAGGT
ATTCTCTCCACTGTAAGTCATGTAAAGAAAACCATCTTCATCCTTGTTTT
CCTCATATATAGCAGACATCAAGGCACCGGTTGGAGGTAAAGTATTCTTA
ACAAAAACAAATATGGCCTTTTCTGCACTGAGCTTAATCCTTTTACGGAC
AACATAAACAAATTGTCCCACAGATAAATCCGCTGGGACAAGGTATTTTT
TCTTGTCAATGTCAGGAACATCAGTCTTCTCAGCCTTCTCCACAATCACC
GGAATCCTGTCAGGATACTTCTCTCTAATGCGAGCAGATTCTGCCAGCCT
CCTCTCCAATGGATGCTCGAGCTTGAATGAACTTTTGGCCATGGCGAAAC
TGACGCTACGATGACTCTTCAACACGACACGAGAAGTGGATCGGGAAGAG
AAGGAAATTATTAGGGTTTCAAGGTATTTGATTGATTGATTGATTGATCG
GTTGATTGTGGCTTTGCTGCACTGCCCCCATCAATCATTTGCAGGTGGCA
GTTAGGAATATAAGAAGAGATGCGTTAAAAGCTTATGAAAAACTTCAGAA
GGAGAAGAAGCTCTCTGAAGACAATGTGAAGGACTTGTCAAGTGATTTAC
AGAAACTAACAGATGAGTATATGAAGAAGATTGATAGCATCTACAAACAG
AAAGAGAAGGAGTTGTTGAAAGTTTAATGATTGTTTACACACAAAT
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