CX069529

Overview
NameCX069529
Unique NameCX069529
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_AETCO (ATP synthase subunit alpha, chloroplastic OS=Aethionema cordifolium GN=atpA PE=3 SV=1)

HSP 1 Score: 370.548 bits (950), Expect = 5.897e-102
Identity = 193/200 (96.50%), Postives = 196/200 (98.00%), Query Frame = 1 
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M T+KADEISNIIRERIEQYNREVKIVN GTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLES NVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALA PIDGRG+ISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ+GQNVICVYVAIG
Sbjct:    1 MVTLKADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALANPIDGRGKISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQEGQNVICVYVAIG 200
[Close]
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_LOBMA (ATP synthase subunit alpha, chloroplastic OS=Lobularia maritima GN=atpA PE=3 SV=1)

HSP 1 Score: 369.392 bits (947), Expect = 1.314e-101
Identity = 193/200 (96.50%), Postives = 195/200 (97.50%), Query Frame = 1 
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M TI+ADEISNIIRERIEQYNREV IVN GTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLES NVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALA PIDGRG+ISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG
Sbjct:    1 MVTIRADEISNIIRERIEQYNREVTIVNTGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALANPIDGRGQISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 200
[Close]
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_PLAOC (ATP synthase subunit alpha, chloroplastic OS=Platanus occidentalis GN=atpA PE=3 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 1.716e-101
Identity = 191/200 (95.50%), Postives = 197/200 (98.50%), Query Frame = 1 
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M T++ADEISNIIRERIEQYNREVK+VN GTVLQVGDGIARI+GLDEVMAGELVEFEEGTIGIALNLES NVGVVLMGDGLMIQEGSSVKATG+IAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ+GQNVICVYVAIG
Sbjct:    1 MVTLRADEISNIIRERIEQYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQKGQNVICVYVAIG 200
[Close]
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_OENPA (ATP synthase subunit alpha, chloroplastic OS=Oenothera parviflora GN=atpA PE=3 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 1.716e-101
Identity = 192/200 (96.00%), Postives = 196/200 (98.00%), Query Frame = 1 
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M TI+ADEISNIIRERIEQYNREVKIVN GTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLES NVGVVLMGDGLMIQEGSSVKATG+IAQIPVSEAYLGRVINALAKPIDGRGEIS+SESRLIESPAPGIISRRSVYEPLQTGLIAID+MIPIGRGQRELIIGDRQTGKTAVATDTILNQQG NVICVYVAIG
Sbjct:    1 MATIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESKNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISSSESRLIESPAPGIISRRSVYEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGNNVICVYVAIG 200
[Close]
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_OENAR (ATP synthase subunit alpha, chloroplastic OS=Oenothera argillicola GN=atpA PE=3 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 1.716e-101
Identity = 192/200 (96.00%), Postives = 196/200 (98.00%), Query Frame = 1 
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M TI+ADEISNIIRERIEQYNREVKIVN GTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLES NVGVVLMGDGLMIQEGSSVKATG+IAQIPVSEAYLGRVINALAKPIDGRGEIS+SESRLIESPAPGIISRRSVYEPLQTGLIAID+MIPIGRGQRELIIGDRQTGKTAVATDTILNQQG NVICVYVAIG
Sbjct:    1 MATIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESKNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISSSESRLIESPAPGIISRRSVYEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGNNVICVYVAIG 200
[Close]
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_NASOF (ATP synthase subunit alpha, chloroplastic OS=Nasturtium officinale GN=atpA PE=3 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 1.716e-101
Identity = 193/200 (96.50%), Postives = 195/200 (97.50%), Query Frame = 1 
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M TI+ADEISNIIRERIEQYNREV IVN GTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLES NVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALA PIDGRG+ISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG
Sbjct:    1 MVTIRADEISNIIRERIEQYNREVTIVNTGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALANPIDGRGKISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 200
[Close]
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_MORIN (ATP synthase subunit alpha, chloroplastic OS=Morus indica GN=atpA PE=3 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 1.716e-101
Identity = 192/200 (96.00%), Postives = 197/200 (98.50%), Query Frame = 1 
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M TI+ADEIS+IIRERIEQYNREVKI+N GTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLES NVGVVLMGDGLMIQEGSSVKATG+IAQIPVSEA+LGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG
Sbjct:    1 MVTIRADEISDIIRERIEQYNREVKILNTGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAFLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 200
[Close]
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_DRANE (ATP synthase subunit alpha, chloroplastic OS=Draba nemorosa GN=atpA PE=3 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 1.716e-101
Identity = 193/200 (96.50%), Postives = 195/200 (97.50%), Query Frame = 1 
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M TI+ADEISNIIRERIEQYNREV IVN GTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLES NVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALA PIDGRG+ISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG
Sbjct:    1 MVTIRADEISNIIRERIEQYNREVTIVNTGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALANPIDGRGKISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 200
[Close]
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_CERDE (ATP synthase subunit alpha, chloroplastic OS=Ceratophyllum demersum GN=atpA PE=3 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 1.716e-101
Identity = 191/200 (95.50%), Postives = 198/200 (99.00%), Query Frame = 1 
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M TI+ADEISNIIRERIEQYNRE+KIVN GTVLQVGDGIARI+GLDEVMAGELVEFEEGTIGIALNLES+NVGVVLMGDGLMIQEGSSVKATG+IAQIPVSE+YLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ+GQNVICVYVAIG
Sbjct:    1 MVTIRADEISNIIRERIEQYNREIKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGTIGIALNLESSNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSESYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQKGQNVICVYVAIG 200
[Close]
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_BARVE (ATP synthase subunit alpha, chloroplastic OS=Barbarea verna GN=atpA PE=3 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 1.716e-101
Identity = 193/200 (96.50%), Postives = 195/200 (97.50%), Query Frame = 1 
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M TI+ADEISNIIRERIEQYNREV IVN GTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLES NVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALA PIDGRG+ISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG
Sbjct:    1 MVTIRADEISNIIRERIEQYNREVTIVNTGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALANPIDGRGKISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 200
The following BLAST results are available for this feature:
BLAST of CX069529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPA_AETCO5.897e-10296.50ATP synthase subunit alpha, chloroplastic OS=Aethi... [more]
ATPA_LOBMA1.314e-10196.50ATP synthase subunit alpha, chloroplastic OS=Lobul... [more]
ATPA_PLAOC1.716e-10195.50ATP synthase subunit alpha, chloroplastic OS=Plata... [more]
ATPA_OENPA1.716e-10196.00ATP synthase subunit alpha, chloroplastic OS=Oenot... [more]
ATPA_OENAR1.716e-10196.00ATP synthase subunit alpha, chloroplastic OS=Oenot... [more]
ATPA_NASOF1.716e-10196.50ATP synthase subunit alpha, chloroplastic OS=Nastu... [more]
ATPA_MORIN1.716e-10196.00ATP synthase subunit alpha, chloroplastic OS=Morus... [more]
ATPA_DRANE1.716e-10196.50ATP synthase subunit alpha, chloroplastic OS=Draba... [more]
ATPA_CERDE1.716e-10195.50ATP synthase subunit alpha, chloroplastic OS=Cerat... [more]
ATPA_BARVE1.716e-10196.50ATP synthase subunit alpha, chloroplastic OS=Barba... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_11A09_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11A09-B17-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069529 ID=CX069529; Name=CX069529; organism=Citrus sinensis; type=EST; length=804bp
GTCCGACAACGGGTTTTCCAACAAGCTTTACAAGGAGCGCTCGGAACTCT
GAATAGTTGTTTGAACAAGGAGTTACATTTACGTACCATTAGTGCCAATA
TTGGCATGTTTGGAGCGATGAAAGAAATAACTGATTAGTCCTTTTACTGT
AGGCACATTATTTTTTTTTTTTTTTTTAAGAAAAAAAAGAATTAAGAAAT
ACTTATGACAACAATTAAAGCCGACGAAATTAGTAATATTATCCGCGAAC
GTATTGAGCAATATAATAGAGAAGTAAAGATTGTAAATATTGGGACCGTA
CTTCAAGTAGGCGACGGCATCGCCCGTATTTATGGTCTTGATGAAGTAAT
GGCAGGTGAATTAGTAGAATTTGAAGAGGGTACAATAGGCATTGCTCTGA
ATTTGGAATCAACTAATGTTGGTGTTGTTTTAATGGGTGACGGTTTAATG
ATACAAGAAGGAAGTTCTGTAAAAGCAACCGGAAAAATTGCTCAGATACC
AGTAAGCGAGGCTTATTTAGGTCGTGTTATAAATGCCCTGGCTAAACCTA
TTGATGGTCGAGGTGAAATTTCAGCTTCTGAATCTCGATTAATTGAATCC
CCTGCTCCGGGTATTATTTCGAGACGTTCCGTATATGAGCCTCTTCAAAC
AGGACTTATTGCTATTGATTCGATGATCCCTATCGGACGCGGTCAGCGAG
AATTAATTATTGGGGACAGACAGACCGGTAAAACGGCAGTAGCCACGGAT
ACGATTCTCAACCAACAAGGGCAAAATGTAATATGTGTTTATGTAGCTAT
TGGT
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