CX069529

Overview
NameCX069529
Unique NameCX069529
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_THEEB (ATP synthase subunit alpha OS=Thermosynechococcus elongatus (strain BP-1) GN=atpA PE=1 SV=1)

HSP 1 Score: 309.301 bits (791), Expect = 1.613e-83
Identity = 152/200 (76.00%), Postives = 181/200 (90.50%), Query Frame = 1
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M +I+ DEIS+IIR++IEQY + +K+ N+GTVLQVGDGIAR+YGLD+VMA ELVEFE+GT+GIALNLE  NVGVVLMGDGL I+EGS+V+ATGKIA IPV EA +GRV++AL +PIDG+GEI  ++SRLIESPAPGI+ R+SV EPLQTG+ AID+MIPIGRGQRELIIGDRQTGKTAVA DTILNQ+GQ+VICVYVAIG
Sbjct:    1 MVSIRPDEISSIIRQQIEQYEQSIKVDNVGTVLQVGDGIARVYGLDKVMASELVEFEDGTVGIALNLEEDNVGVVLMGDGLSIEEGSTVRATGKIASIPVGEAAIGRVVDALMRPIDGKGEIHTTQSRLIESPAPGIVQRKSVCEPLQTGITAIDAMIPIGRGQRELIIGDRQTGKTAVAIDTILNQKGQDVICVYVAIG 200          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA1_ACAM1 (ATP synthase subunit alpha 1 OS=Acaryochloris marina (strain MBIC 11017) GN=atpA1 PE=3 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 2.752e-83
Identity = 148/200 (74.00%), Postives = 184/200 (92.00%), Query Frame = 1
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M +I+ DEISNIIR++IEQY+++VK+ N+GTVLQVGDGIAR+YGL++ MAGEL++FE+GT+GIALNLE  NVG VLMGDG  +QEGS+V++TGKIAQIPV +A +GRV++ALA+PIDG+G+I+ SE+RLIESPAPGII R+SVYEP+QTG+ AIDSM+PIGRGQRELIIGDRQTGKTAVA DTILNQ+ ++VICVYVAIG
Sbjct:    1 MVSIRPDEISNIIRQQIEQYDQQVKVDNVGTVLQVGDGIARVYGLEQAMAGELLDFEDGTVGIALNLEEDNVGAVLMGDGRDLQEGSTVRSTGKIAQIPVGDALIGRVLDALARPIDGKGDINTSETRLIESPAPGIIERKSVYEPMQTGITAIDSMVPIGRGQRELIIGDRQTGKTAVAIDTILNQKSEDVICVYVAIG 200          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_SYNP6 (ATP synthase subunit alpha OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=atpA PE=3 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 1.046e-82
Identity = 150/200 (75.00%), Postives = 183/200 (91.50%), Query Frame = 1
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M +I+ DEIS+IIR++IEQY+++VK+ N+GTVLQVGDGIARIYGL +VM+GELVEFE+GT GIALNLE  NVG VLMG+G  IQEGS+VKATGKIAQIPV +A +GRV++ L  P+DG+GEI+A+E+RLIESPAPGII+RRSV+EP+QTG+ AID+MIPIGRGQRELIIGDRQTGKTA+A DTILNQ+G++VICVYVAIG
Sbjct:    1 MVSIRPDEISSIIRQQIEQYSQDVKVENVGTVLQVGDGIARIYGLQQVMSGELVEFEDGTTGIALNLEEDNVGAVLMGEGRNIQEGSTVKATGKIAQIPVGDALVGRVVSPLGAPLDGKGEIAATENRLIESPAPGIIARRSVHEPMQTGITAIDAMIPIGRGQRELIIGDRQTGKTAIAIDTILNQKGEDVICVYVAIG 200          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_SYNE7 (ATP synthase subunit alpha OS=Synechococcus elongatus (strain PCC 7942) GN=atpA PE=3 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 1.046e-82
Identity = 150/200 (75.00%), Postives = 183/200 (91.50%), Query Frame = 1
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M +I+ DEIS+IIR++IEQY+++VK+ N+GTVLQVGDGIARIYGL +VM+GELVEFE+GT GIALNLE  NVG VLMG+G  IQEGS+VKATGKIAQIPV +A +GRV++ L  P+DG+GEI+A+E+RLIESPAPGII+RRSV+EP+QTG+ AID+MIPIGRGQRELIIGDRQTGKTA+A DTILNQ+G++VICVYVAIG
Sbjct:    1 MVSIRPDEISSIIRQQIEQYSQDVKVENVGTVLQVGDGIARIYGLQQVMSGELVEFEDGTTGIALNLEEDNVGAVLMGEGRNIQEGSTVKATGKIAQIPVGDALVGRVVSPLGAPLDGKGEIAATENRLIESPAPGIIARRSVHEPMQTGITAIDAMIPIGRGQRELIIGDRQTGKTAIAIDTILNQKGEDVICVYVAIG 200          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_NOSP7 (ATP synthase subunit alpha OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=atpA PE=3 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.784e-82
Identity = 150/198 (75.76%), Postives = 182/198 (91.92%), Query Frame = 1
Query:  211 TIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            +I+ DEIS+II+++IEQY++EVK+ N+GTVLQVGDGIARIYGL++ MAGEL+EFE+GTIGIA NLE  NVG VLMG+GL IQEGSSV ATG+IAQIPV EA +GRV++AL +PIDG+G+I +SESRLIESPAPGII+RRSV+EP+QTG+ AIDSMIPIGRGQRELIIGDRQTGKTA+A DTI+NQ+ ++VICVYVAIG
Sbjct:    4 SIRPDEISSIIQQQIEQYDQEVKVANVGTVLQVGDGIARIYGLEKAMAGELLEFEDGTIGIAQNLEEDNVGAVLMGEGLEIQEGSSVTATGRIAQIPVGEALIGRVVDALGRPIDGKGDIKSSESRLIESPAPGIIARRSVHEPMQTGITAIDSMIPIGRGQRELIIGDRQTGKTAIAIDTIINQKEEDVICVYVAIG 201          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_EUGGR (ATP synthase subunit alpha, chloroplastic OS=Euglena gracilis GN=atpA PE=3 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.784e-82
Identity = 149/200 (74.50%), Postives = 183/200 (91.50%), Query Frame = 1
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M  ++ +E++ IIR+++++Y +E+KIVN+GTVLQVGDGIARIYGL++VMAGELVEF+EGTIGIALNLE+ NVG VLMG+   ++EG+SVK TGKIAQIPV   +LGRV++ALA+PIDG+G+I++  +RLIESPAPGI+SRRSV+EPLQTGLIAID+MIPIGRGQRELIIGDRQTGKTAVATDTILNQ+GQ VICVYVAIG
Sbjct:    1 MIRVRPNEVTRIIRQQVKKYRQELKIVNVGTVLQVGDGIARIYGLEKVMAGELVEFDEGTIGIALNLEADNVGAVLMGEATNLKEGASVKTTGKIAQIPVGRGFLGRVVDALARPIDGKGDIASFTTRLIESPAPGIVSRRSVHEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQKGQGVICVYVAIG 200          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_CYAPA (ATP synthase subunit alpha, cyanelle OS=Cyanophora paradoxa GN=atpA PE=3 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.972e-81
Identity = 148/200 (74.00%), Postives = 183/200 (91.50%), Query Frame = 1
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M +I+ DEIS+IIR++IEQY++E+++ N+GTVLQVGDGIAR+YGLD+VM+GEL+EFE+GTIGIALNLE+ NVGVVLMGDG  I EGSSV+AT KIAQ+PV +A +GRV++ALA+PIDG+G+I+ +++RLIES APGIISR+ VYEPLQTG+ AID+MIPI RGQRELIIGDRQTGKTAVA DTILNQ+GQ V+CVYVAIG
Sbjct:    1 MVSIRPDEISSIIRQQIEQYDQEIQVSNVGTVLQVGDGIARVYGLDKVMSGELLEFEDGTIGIALNLEADNVGVVLMGDGRNILEGSSVRATQKIAQVPVGDAVIGRVVDALARPIDGKGDIATTDTRLIESSAPGIISRKFVYEPLQTGITAIDAMIPIPRGQRELIIGDRQTGKTAVAIDTILNQKGQGVVCVYVAIG 200          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_TRIEI (ATP synthase subunit alpha OS=Trichodesmium erythraeum (strain IMS101) GN=atpA PE=3 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.576e-81
Identity = 145/200 (72.50%), Postives = 178/200 (89.00%), Query Frame = 1
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M +I+ DEIS IIR++IEQY ++VK+ N+GTVLQVGDGIAR+YGLD+VMAGELVEF +GT+GIA NLE  NVG VLMG+G  IQEGS+V ATG+IAQ+PV +A +GRV++ L +PIDG+GE+  ++SRL+ESPAPGII RRSVYEP+QTG+ AIDSMIPIGRGQRELIIGDRQTGKTA+A DTI+NQ+G++VICVYVAIG
Sbjct:    1 MVSIRPDEISQIIRDQIEQYEQDVKVSNVGTVLQVGDGIARVYGLDKVMAGELVEFADGTVGIAQNLEEDNVGAVLMGEGREIQEGSAVTATGRIAQVPVGDALVGRVVDGLGRPIDGKGEMKTTDSRLLESPAPGIIDRRSVYEPMQTGITAIDSMIPIGRGQRELIIGDRQTGKTAIAIDTIINQKGEDVICVYVAIG 200          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_SYNP1 (ATP synthase subunit alpha OS=Synechococcus sp. (strain PCC 6716) GN=atpA PE=1 SV=4)

HSP 1 Score: 301.982 bits (772), Expect = 2.576e-81
Identity = 148/200 (74.00%), Postives = 179/200 (89.50%), Query Frame = 1
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M +I+ DEIS+IIR++IEQY + + + N+GTVLQVGDGIAR+YGLD+VMA ELVEFE+GT+GIALNLE  NVGVVLMG GL I+EGS+V+ATGKIA +PV EA +GRV++AL +PIDG+GEI A+ +RL+ESPAPGI+ R+SV EPLQTG+ AID+MIPIGRGQRELIIGDRQTGKTAVA DTILNQ+GQ+VICVYVAIG
Sbjct:    1 MVSIRPDEISSIIRQQIEQYEQSINVDNVGTVLQVGDGIARVYGLDKVMASELVEFEDGTVGIALNLEEDNVGVVLMGAGLGIEEGSTVRATGKIASVPVGEAVIGRVVDALMRPIDGKGEIHATATRLLESPAPGIVQRKSVCEPLQTGITAIDAMIPIGRGQRELIIGDRQTGKTAVAIDTILNQKGQDVICVYVAIG 200          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_SYNJB (ATP synthase subunit alpha OS=Synechococcus sp. GN=atpA PE=3 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 5.739e-81
Identity = 147/200 (73.50%), Postives = 175/200 (87.50%), Query Frame = 1
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M TI+ DEIS II+++IEQYN+E+++ N+GTVLQVGDGIARIYGLD+VMA EL+EFE+GT GIALNLE  N+G VL+G G  IQEGS+VK+TGKIA IPV EA LGRV++ L  P+DG+G I  +ESRLIESPAPGI+ RRSVYEPLQTG+ AID++IPIGRGQRELIIGDRQTGKT VA DTILNQ+GQ+VIC+YVAIG
Sbjct:    1 MPTIRPDEISTIIKQQIEQYNQEMQVSNVGTVLQVGDGIARIYGLDKVMASELLEFEDGTTGIALNLEEDNIGAVLIGSGRNIQEGSTVKSTGKIASIPVGEALLGRVVDPLCNPLDGKGPIQCTESRLIESPAPGIVDRRSVYEPLQTGITAIDALIPIGRGQRELIIGDRQTGKTTVAVDTILNQKGQDVICIYVAIG 200          
The following BLAST results are available for this feature:
BLAST of CX069529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPA_THEEB1.613e-8376.00ATP synthase subunit alpha OS=Thermosynechococcus ... [more]
ATPA1_ACAM12.752e-8374.00ATP synthase subunit alpha 1 OS=Acaryochloris mari... [more]
ATPA_SYNP61.046e-8275.00ATP synthase subunit alpha OS=Synechococcus sp. (s... [more]
ATPA_SYNE71.046e-8275.00ATP synthase subunit alpha OS=Synechococcus elonga... [more]
ATPA_NOSP71.784e-8275.76ATP synthase subunit alpha OS=Nostoc punctiforme (... [more]
ATPA_EUGGR1.784e-8274.50ATP synthase subunit alpha, chloroplastic OS=Eugle... [more]
ATPA_CYAPA1.972e-8174.00ATP synthase subunit alpha, cyanelle OS=Cyanophora... [more]
ATPA_TRIEI2.576e-8172.50ATP synthase subunit alpha OS=Trichodesmium erythr... [more]
ATPA_SYNP12.576e-8174.00ATP synthase subunit alpha OS=Synechococcus sp. (s... [more]
ATPA_SYNJB5.739e-8173.50ATP synthase subunit alpha OS=Synechococcus sp. GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_11A09_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11A09-B17-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069529 ID=CX069529; Name=CX069529; organism=Citrus sinensis; type=EST; length=804bp
GTCCGACAACGGGTTTTCCAACAAGCTTTACAAGGAGCGCTCGGAACTCT
GAATAGTTGTTTGAACAAGGAGTTACATTTACGTACCATTAGTGCCAATA
TTGGCATGTTTGGAGCGATGAAAGAAATAACTGATTAGTCCTTTTACTGT
AGGCACATTATTTTTTTTTTTTTTTTTAAGAAAAAAAAGAATTAAGAAAT
ACTTATGACAACAATTAAAGCCGACGAAATTAGTAATATTATCCGCGAAC
GTATTGAGCAATATAATAGAGAAGTAAAGATTGTAAATATTGGGACCGTA
CTTCAAGTAGGCGACGGCATCGCCCGTATTTATGGTCTTGATGAAGTAAT
GGCAGGTGAATTAGTAGAATTTGAAGAGGGTACAATAGGCATTGCTCTGA
ATTTGGAATCAACTAATGTTGGTGTTGTTTTAATGGGTGACGGTTTAATG
ATACAAGAAGGAAGTTCTGTAAAAGCAACCGGAAAAATTGCTCAGATACC
AGTAAGCGAGGCTTATTTAGGTCGTGTTATAAATGCCCTGGCTAAACCTA
TTGATGGTCGAGGTGAAATTTCAGCTTCTGAATCTCGATTAATTGAATCC
CCTGCTCCGGGTATTATTTCGAGACGTTCCGTATATGAGCCTCTTCAAAC
AGGACTTATTGCTATTGATTCGATGATCCCTATCGGACGCGGTCAGCGAG
AATTAATTATTGGGGACAGACAGACCGGTAAAACGGCAGTAGCCACGGAT
ACGATTCTCAACCAACAAGGGCAAAATGTAATATGTGTTTATGTAGCTAT
TGGT
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