CX069529

Overview
NameCX069529
Unique NameCX069529
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_CYAP4 (ATP synthase subunit alpha OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=atpA PE=3 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 5.739e-81
Identity = 142/200 (71.00%), Postives = 182/200 (91.00%), Query Frame = 1
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M +I+ DEIS+IIR++IEQY+++VK+ N+GTVLQVGDGIAR+YGL++VMA EL+EFE+GT+GIALNLE  NVGVVLMG+G  ++EGS+V++TG++AQ+PV E  +GRV++AL +PIDG+GEI ++E+RL+ESPAPGI+ R+SVYEP+QTG+ AID+MIPIGRGQRELIIGDRQTGKTAVA DTILNQ+G  VICVYVAIG
Sbjct:    1 MVSIRPDEISSIIRQQIEQYDQQVKVENVGTVLQVGDGIARVYGLEKVMASELLEFEDGTVGIALNLEEDNVGVVLMGEGRDLEEGSTVRSTGRVAQVPVGEGAIGRVVDALVRPIDGKGEIHSTETRLLESPAPGIVQRKSVYEPMQTGITAIDAMIPIGRGQRELIIGDRQTGKTAVAIDTILNQKGSGVICVYVAIG 200          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_RHDSA (ATP synthase subunit alpha, chloroplastic OS=Rhodomonas salina GN=atpA PE=3 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 1.278e-80
Identity = 146/200 (73.00%), Postives = 181/200 (90.50%), Query Frame = 1
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M  I+ DEIS+IIR++I++Y++ V++ N+GTVLQ+GDGIAR+YGLD+VMAGEL+EFE+ TIGIALNLES NVGVVLMG+G  I EGSSVKATGKIAQ+PV + YLGRV+N+L  PIDG+G+IS+S++RLIES APGIISR+SV EP+QTG+ AIDSMIPIGRGQRELIIGDRQTGKT+VA DTI+NQ+ ++V+CVYVAIG
Sbjct:    1 MVNIRPDEISSIIRQQIDKYDQGVQVANVGTVLQIGDGIARVYGLDQVMAGELLEFEDETIGIALNLESDNVGVVLMGEGRAILEGSSVKATGKIAQVPVGDGYLGRVVNSLGAPIDGKGDISSSDTRLIESAAPGIISRKSVCEPIQTGITAIDSMIPIGRGQRELIIGDRQTGKTSVAIDTIINQKTEDVVCVYVAIG 200          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_GUITH (ATP synthase subunit alpha, chloroplastic OS=Guillardia theta GN=atpA PE=3 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.670e-80
Identity = 145/200 (72.50%), Postives = 182/200 (91.00%), Query Frame = 1
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M  I+ DEIS+IIR++I++Y++ +++ N+GTVLQ+GDGIAR+YGLD+VMAGEL+EFE+ TIGIALNLES NVGVVLMG+G  I EGSSVKATGKIAQ+PV ++YLGRV+NAL  PIDG+G+I+ SE+RLIES APGIISR+SV EP+QTG+ AIDSMIPIGRGQRELIIGDRQTGK++VA DTI+NQ+G++V+CVYVA+G
Sbjct:    1 MVNIRPDEISSIIRQQIDKYDQAIQVSNVGTVLQIGDGIARVYGLDQVMAGELLEFEDKTIGIALNLESDNVGVVLMGEGRGILEGSSVKATGKIAQVPVGKSYLGRVVNALGTPIDGKGDINCSETRLIESIAPGIISRKSVCEPIQTGITAIDSMIPIGRGQRELIIGDRQTGKSSVAIDTIINQKGEDVVCVYVAVG 200          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_ANAVT (ATP synthase subunit alpha OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=atpA PE=3 SV=2)

HSP 1 Score: 299.286 bits (765), Expect = 1.670e-80
Identity = 146/198 (73.74%), Postives = 180/198 (90.91%), Query Frame = 1
Query:  211 TIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            +I+ DEIS+II+++IEQY++EVK+ N+GTVLQVGDGIARIYGL++ MAGEL+EFE+GT+GIA NLE  NVG VLMG+G  IQEGS+V ATG+IAQI V EA +GRV++AL + IDG+G+I ASESRLIESPAPGII+RRSV+EP+QTG+ AIDSMIPIGRGQRELIIGDRQTGKTA+A DTI+NQ+G++V+CVYVAIG
Sbjct:    4 SIRPDEISSIIQQQIEQYDQEVKVANVGTVLQVGDGIARIYGLEKAMAGELLEFEDGTVGIAQNLEEDNVGAVLMGEGREIQEGSTVTATGRIAQIGVGEALIGRVVDALGRAIDGKGDIKASESRLIESPAPGIIARRSVHEPMQTGITAIDSMIPIGRGQRELIIGDRQTGKTAIAIDTIINQKGEDVVCVYVAIG 201          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_ANASP (ATP synthase subunit alpha OS=Anabaena sp. (strain PCC 7120) GN=atpA PE=3 SV=2)

HSP 1 Score: 299.286 bits (765), Expect = 1.670e-80
Identity = 146/198 (73.74%), Postives = 180/198 (90.91%), Query Frame = 1
Query:  211 TIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            +I+ DEIS+II+++IEQY++EVK+ N+GTVLQVGDGIARIYGL++ MAGEL+EFE+GT+GIA NLE  NVG VLMG+G  IQEGS+V ATG+IAQI V EA +GRV++AL + IDG+G+I ASESRLIESPAPGII+RRSV+EP+QTG+ AIDSMIPIGRGQRELIIGDRQTGKTA+A DTI+NQ+G++V+CVYVAIG
Sbjct:    4 SIRPDEISSIIQQQIEQYDQEVKVANVGTVLQVGDGIARIYGLEKAMAGELLEFEDGTVGIAQNLEEDNVGAVLMGEGREIQEGSTVTATGRIAQIGVGEALIGRVVDALGRAIDGKGDIKASESRLIESPAPGIIARRSVHEPMQTGITAIDSMIPIGRGQRELIIGDRQTGKTAIAIDTIINQKGEDVVCVYVAIG 201          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_PORPU (ATP synthase subunit alpha, chloroplastic OS=Porphyra purpurea GN=atpA PE=3 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 2.181e-80
Identity = 149/200 (74.50%), Postives = 180/200 (90.00%), Query Frame = 1
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M  I+ DEIS+IIR++IE+Y+++V++ NIGTVLQVGDGIAR+YGLDEVMAGEL+EFE+ TIG+ALNLES NVGVVLMGDG  I EGSSVK TGKIAQIPV +A+LGRV++ LA+PID +GE +++ +RLIES APGII R+SV EP+QTG+ AIDSMIPIGRGQRELIIGDRQTGKTAVA DTI+NQ+GQ+V+CVYVAIG
Sbjct:    1 MVNIRPDEISSIIRQQIEKYDQDVEVANIGTVLQVGDGIARVYGLDEVMAGELLEFEDKTIGVALNLESDNVGVVLMGDGRDILEGSSVKGTGKIAQIPVGDAFLGRVVDPLARPIDNKGEPASNGTRLIESMAPGIIGRQSVCEPMQTGITAIDSMIPIGRGQRELIIGDRQTGKTAVALDTIINQKGQDVVCVYVAIG 200          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_SYNJA (ATP synthase subunit alpha OS=Synechococcus sp. (strain JA-3-3Ab) GN=atpA PE=3 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 2.848e-80
Identity = 147/200 (73.50%), Postives = 175/200 (87.50%), Query Frame = 1
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M TI+ DEIS II+++IEQYN+E++I N+GTVLQVGDGIARIYGL++VMA EL+EFE+GT+GIALNLE  NVG VL+G G  IQEGS VKATG+IA IPV EA LGRV++ L  PIDG+G I  +E+RLIESPAPGI+ RRSVYEPLQTG+ AID++IPIGRGQRELIIGDRQTGKT +A DTILNQ+GQ+VIC+YVAIG
Sbjct:    1 MPTIRPDEISTIIKQQIEQYNQEMQISNVGTVLQVGDGIARIYGLEKVMASELLEFEDGTVGIALNLEEDNVGAVLIGSGRNIQEGSIVKATGRIASIPVGEALLGRVVDPLCNPIDGKGPIHCTETRLIESPAPGIVDRRSVYEPLQTGITAIDALIPIGRGQRELIIGDRQTGKTTLAVDTILNQKGQDVICIYVAIG 200          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_GRATL (ATP synthase subunit alpha, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=atpA PE=3 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 3.720e-80
Identity = 149/200 (74.50%), Postives = 179/200 (89.50%), Query Frame = 1
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M  I+ DEISN+IR++I++Y +E+++ NIGTVLQVGDGIAR+YGLDEVMAGEL+EFE+ TIGIALNLES NVGVVLMG+G  I EGSSVKATGKIAQIPV +A+LGRV++ LA+PID +G  ++S +RLIES APGII R+SV EPLQTG+ AIDSMIPIGRGQRELIIGDRQTGKTAVA DTI+NQ+GQ+V+C+YVAIG
Sbjct:    1 MLNIRPDEISNVIRQQIDKYEQEIQVANIGTVLQVGDGIARVYGLDEVMAGELLEFEDQTIGIALNLESDNVGVVLMGEGRNILEGSSVKATGKIAQIPVGDAFLGRVVDPLARPIDAKGLPNSSGTRLIESYAPGIIGRQSVCEPLQTGITAIDSMIPIGRGQRELIIGDRQTGKTAVALDTIINQKGQDVVCIYVAIG 200          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_EMIHU (ATP synthase subunit alpha, chloroplastic OS=Emiliania huxleyi GN=atpA PE=3 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 3.720e-80
Identity = 145/200 (72.50%), Postives = 182/200 (91.00%), Query Frame = 1
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M  I+ DEISNIIR++IE Y++EV+I N+GTVLQ+GDGIAR+YGL++VMAGEL+EF++ T+GIALNLE+ NVG VLMG GL I EGS+V++TGKIAQ+PV +A+LGRV+N+LAKPIDG+G+I ASE+RL+ES APGII+R+SV EP+QTG+ AIDSMIPIGRGQRELIIGDRQTGKT+VA DTI+NQ+ ++VICVYVAIG
Sbjct:    1 MINIRPDEISNIIRQQIESYDQEVQIDNVGTVLQIGDGIARVYGLEQVMAGELLEFDDSTVGIALNLENDNVGAVLMGPGLGILEGSAVRSTGKIAQVPVGDAFLGRVVNSLAKPIDGKGDIPASETRLVESMAPGIITRKSVCEPVQTGITAIDSMIPIGRGQRELIIGDRQTGKTSVAIDTIINQKTEDVICVYVAIG 200          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_PORYE (ATP synthase subunit alpha, chloroplastic OS=Porphyra yezoensis GN=atpA PE=3 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 6.345e-80
Identity = 148/200 (74.00%), Postives = 180/200 (90.00%), Query Frame = 1
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M  I+ DEIS+IIR++IE+Y+++V++ NIGTVLQVGDGIAR+YGLDEVMAGEL+EFE+ TIG+ALNLES NVGVVLMGDG  I EGSSVK TG+IAQIPV +A+LGRV++ LA+PID +GE +++ +RLIES APGII R+SV EP+QTG+ AIDSMIPIGRGQRELIIGDRQTGKTAVA DTI+NQ+GQ+V+CVYVAIG
Sbjct:    1 MVNIRPDEISSIIRQQIEKYDQDVEVANIGTVLQVGDGIARVYGLDEVMAGELLEFEDKTIGVALNLESDNVGVVLMGDGRDILEGSSVKGTGRIAQIPVGDAFLGRVVDPLARPIDDKGEPASNGTRLIESMAPGIIGRQSVCEPMQTGITAIDSMIPIGRGQRELIIGDRQTGKTAVALDTIINQKGQDVVCVYVAIG 200          
The following BLAST results are available for this feature:
BLAST of CX069529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPA_CYAP45.739e-8171.00ATP synthase subunit alpha OS=Cyanothece sp. (stra... [more]
ATPA_RHDSA1.278e-8073.00ATP synthase subunit alpha, chloroplastic OS=Rhodo... [more]
ATPA_GUITH1.670e-8072.50ATP synthase subunit alpha, chloroplastic OS=Guill... [more]
ATPA_ANAVT1.670e-8073.74ATP synthase subunit alpha OS=Anabaena variabilis ... [more]
ATPA_ANASP1.670e-8073.74ATP synthase subunit alpha OS=Anabaena sp. (strain... [more]
ATPA_PORPU2.181e-8074.50ATP synthase subunit alpha, chloroplastic OS=Porph... [more]
ATPA_SYNJA2.848e-8073.50ATP synthase subunit alpha OS=Synechococcus sp. (s... [more]
ATPA_GRATL3.720e-8074.50ATP synthase subunit alpha, chloroplastic OS=Graci... [more]
ATPA_EMIHU3.720e-8072.50ATP synthase subunit alpha, chloroplastic OS=Emili... [more]
ATPA_PORYE6.345e-8074.00ATP synthase subunit alpha, chloroplastic OS=Porph... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_11A09_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11A09-B17-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069529 ID=CX069529; Name=CX069529; organism=Citrus sinensis; type=EST; length=804bp
GTCCGACAACGGGTTTTCCAACAAGCTTTACAAGGAGCGCTCGGAACTCT
GAATAGTTGTTTGAACAAGGAGTTACATTTACGTACCATTAGTGCCAATA
TTGGCATGTTTGGAGCGATGAAAGAAATAACTGATTAGTCCTTTTACTGT
AGGCACATTATTTTTTTTTTTTTTTTTAAGAAAAAAAAGAATTAAGAAAT
ACTTATGACAACAATTAAAGCCGACGAAATTAGTAATATTATCCGCGAAC
GTATTGAGCAATATAATAGAGAAGTAAAGATTGTAAATATTGGGACCGTA
CTTCAAGTAGGCGACGGCATCGCCCGTATTTATGGTCTTGATGAAGTAAT
GGCAGGTGAATTAGTAGAATTTGAAGAGGGTACAATAGGCATTGCTCTGA
ATTTGGAATCAACTAATGTTGGTGTTGTTTTAATGGGTGACGGTTTAATG
ATACAAGAAGGAAGTTCTGTAAAAGCAACCGGAAAAATTGCTCAGATACC
AGTAAGCGAGGCTTATTTAGGTCGTGTTATAAATGCCCTGGCTAAACCTA
TTGATGGTCGAGGTGAAATTTCAGCTTCTGAATCTCGATTAATTGAATCC
CCTGCTCCGGGTATTATTTCGAGACGTTCCGTATATGAGCCTCTTCAAAC
AGGACTTATTGCTATTGATTCGATGATCCCTATCGGACGCGGTCAGCGAG
AATTAATTATTGGGGACAGACAGACCGGTAAAACGGCAGTAGCCACGGAT
ACGATTCTCAACCAACAAGGGCAAAATGTAATATGTGTTTATGTAGCTAT
TGGT
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