CX069529

Overview
NameCX069529
Unique NameCX069529
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_PROMA (ATP synthase subunit alpha OS=Prochlorococcus marinus GN=atpA PE=3 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 2.666e-78
Identity = 139/200 (69.50%), Postives = 176/200 (88.00%), Query Frame = 1
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M +I+ DEIS+I++++I  Y++ V + N+GTVLQ+GDGIAR+YGL++ MAGELVEFE+GT GIALNLE  NVG VLMG+GL IQEGS+VKATGKIA +PV +A LGRV+N L +P+DG GEI+ S+SRLIES APGII R+SV+EP+QTG+ +ID+MIPIGRGQRELIIGDRQTGKTA+A DTI+NQ+GQ+V+CVYVA+G
Sbjct:    1 MVSIRPDEISSILKKQIADYDKSVSVSNVGTVLQIGDGIARVYGLEKAMAGELVEFEDGTEGIALNLEDDNVGAVLMGEGLGIQEGSTVKATGKIASVPVGDAMLGRVVNPLGQPVDGNGEIATSDSRLIESLAPGIIKRKSVHEPMQTGITSIDAMIPIGRGQRELIIGDRQTGKTAIAIDTIINQKGQDVVCVYVAVG 200          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_CHLRE (ATP synthase subunit alpha, chloroplastic OS=Chlamydomonas reinhardtii GN=atpA PE=1 SV=3)

HSP 1 Score: 291.967 bits (746), Expect = 2.666e-78
Identity = 138/194 (71.13%), Postives = 171/194 (88.14%), Query Frame = 1
Query:  223 DEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            +E+SN+I++ IEQY  EVK+V+ G V QVGDGIARIYGL++ M+GEL+EFE+GT+GIALNLE+ NVG VL+GDGL I EGS V+ TGKIA+IPV EAYLGRV++ LA+P+DG+G +   +SR IESPAPGI++RRSVYEPL TGL+A+D+MIP+GRGQRELIIGDRQTGKTA+A DTILNQ+G+ VICVYVAIG
Sbjct:    7 EELSNLIKDLIEQYTPEVKMVDFGIVFQVGDGIARIYGLEKAMSGELLEFEDGTLGIALNLEANNVGAVLLGDGLKITEGSRVRCTGKIAEIPVGEAYLGRVVDGLARPVDGKGAVQTKDSRAIESPAPGIVARRSVYEPLATGLVAVDAMIPVGRGQRELIIGDRQTGKTAIAVDTILNQKGKGVICVYVAIG 200          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_ODOSI (ATP synthase subunit alpha, chloroplastic OS=Odontella sinensis GN=atpA PE=3 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 3.482e-78
Identity = 142/200 (71.00%), Postives = 178/200 (89.00%), Query Frame = 1
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M  I+ DEIS+IIRE+IEQY+++VK+ NIGTVLQVGDGIAR+YGLD+VM+GEL+EFE+ TIGIALNLE+ NVGVVLMG+G  I EGS+VK TG+IAQIP  EA+LGRV+N L  PIDG+G+I+ +E+RL+E+ APGIISR+SV EPLQTG+ +ID+MIPIGRGQRELIIGDRQTGKTA+A DTI+NQ+ ++V+CVYV +G
Sbjct:    1 MINIRPDEISSIIREQIEQYDQDVKVDNIGTVLQVGDGIARVYGLDQVMSGELLEFEDKTIGIALNLENDNVGVVLMGNGRQILEGSTVKTTGQIAQIPTGEAFLGRVVNPLGAPIDGKGDIANTETRLLEAMAPGIISRKSVCEPLQTGITSIDAMIPIGRGQRELIIGDRQTGKTAIAVDTIINQKTEDVVCVYVGVG 200          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_CYAP8 (ATP synthase subunit alpha OS=Cyanothece sp. (strain PCC 8801) GN=atpA PE=3 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 3.482e-78
Identity = 140/200 (70.00%), Postives = 178/200 (89.00%), Query Frame = 1
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M +I+ DEIS+IIR++IE Y++ V + N+GTVLQVGDG ARIYGL++ MAGEL+EFE+GT+GIALNLE  NVG VLMG GL IQEGS+VKATGKIAQ+PV EA +GRV++AL +PIDG+G+I+ +E+RLIES APGI++R+SV EP+QTG+ AID+MIP+GRGQRELIIGDR+TGKTA+A DTI+NQ+ ++VICVYVAIG
Sbjct:    1 MVSIRPDEISSIIRQQIESYDQTVTVSNVGTVLQVGDGTARIYGLEQAMAGELLEFEDGTVGIALNLEEDNVGAVLMGTGLDIQEGSTVKATGKIAQVPVGEALIGRVVDALGRPIDGKGDINTTETRLIESMAPGIVARKSVCEPMQTGITAIDAMIPVGRGQRELIIGDRKTGKTAIAIDTIINQKSEDVICVYVAIG 200          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_PROMT (ATP synthase subunit alpha OS=Prochlorococcus marinus (strain NATL2A) GN=atpA PE=3 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 1.013e-77
Identity = 139/200 (69.50%), Postives = 177/200 (88.50%), Query Frame = 1
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M +I+ DEIS+I++++I  Y++ V + N+GTVLQ+GDGIAR+YGL++VMAGELVEFE+GT GIALNLE  NVGVVLMG+ L +QEGS+VKATGKIA +PV EA LGRV+N L + IDG+GE++ ++SRLIES APGII R+SV+EP+QTG+ +ID+MIPIGRGQRELIIGDRQTGKTA+A DTI+NQ+GQ+VICVYVA+G
Sbjct:    1 MVSIRPDEISSILKQQIADYDKSVSVSNVGTVLQIGDGIARVYGLEKVMAGELVEFEDGTEGIALNLEDDNVGVVLMGEALGVQEGSTVKATGKIASVPVGEAMLGRVVNPLGQQIDGKGEMATTDSRLIESIAPGIIKRKSVHEPMQTGITSIDAMIPIGRGQRELIIGDRQTGKTAIAIDTIINQKGQDVICVYVAVG 200          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_PROM1 (ATP synthase subunit alpha OS=Prochlorococcus marinus (strain NATL1A) GN=atpA PE=3 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.323e-77
Identity = 138/200 (69.00%), Postives = 177/200 (88.50%), Query Frame = 1
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M +I+ DEIS+I++++I  Y++ V + N+GTVLQ+GDGIAR+YGL++VMAGELVEFE+GT GIALNLE  NVGVVLMG+ L +QEGS+VKATGKIA +PV EA LGRV+N L + IDG+GEI+ +++RLIES APGII R+SV+EP+QTG+ +ID+MIPIGRGQRELIIGDRQTGKTA+A DTI+NQ+GQ+V+CVYVA+G
Sbjct:    1 MVSIRPDEISSILKQQIADYDKSVSVSNVGTVLQIGDGIARVYGLEKVMAGELVEFEDGTEGIALNLEDDNVGVVLMGEALGVQEGSTVKATGKIASVPVGEAMLGRVVNPLGQQIDGKGEIATTDTRLIESIAPGIIKRKSVHEPMQTGITSIDAMIPIGRGQRELIIGDRQTGKTAIAIDTIINQKGQDVVCVYVAVG 200          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_PROM4 (ATP synthase subunit alpha OS=Prochlorococcus marinus (strain MIT 9211) GN=atpA PE=3 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.728e-77
Identity = 137/200 (68.50%), Postives = 176/200 (88.00%), Query Frame = 1
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M +I+ DEIS+I++++I  Y++ V + N+GTVLQ+GDGIARIYGL++VMAGELVEFE+GT GIALNLE  NVG VLMG+ L +QEGS+VK+TGKIA +PV +A LGRV+N L +P+DG G+I+ S+SRLIES APGII R+SV+EP+QTG+ +ID+MIPIGRGQRELIIGDRQTGKTA+A DTI+NQ+GQ+V+CVYVA+G
Sbjct:    1 MVSIRPDEISSILKQQIANYDKSVSVSNVGTVLQIGDGIARIYGLEKVMAGELVEFEDGTEGIALNLEDDNVGAVLMGEALGVQEGSTVKSTGKIASVPVGQAMLGRVVNPLGQPVDGNGDIATSDSRLIESLAPGIIKRKSVHEPMQTGITSIDAMIPIGRGQRELIIGDRQTGKTAIAIDTIINQKGQDVVCVYVAVG 200          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_PROMP (ATP synthase subunit alpha OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=atpA PE=3 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 2.257e-77
Identity = 138/200 (69.00%), Postives = 174/200 (87.00%), Query Frame = 1
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M +I+ DEIS+I++++I  Y++ V + N+GTVLQ+GDGIARIYGLD+VMAGEL+EFE+GT GIALNLE  NVG VLMG+ L +QEGS+VK+TGKIA +PV EA  GRV+N L +PIDG+GEI  S++RLIE  APGII RRSV+EP+QTG+ +ID+MIP+GRGQRELIIGDRQTGKTA+A DTI+NQ+GQ+V+CVYVAIG
Sbjct:    1 MVSIRPDEISSILKQQITDYDQSVNVSNVGTVLQIGDGIARIYGLDQVMAGELLEFEDGTEGIALNLEDDNVGAVLMGEALGVQEGSNVKSTGKIASVPVGEAMKGRVVNPLGQPIDGKGEIPTSDNRLIEEMAPGIIKRRSVHEPMQTGITSIDAMIPVGRGQRELIIGDRQTGKTAIAIDTIINQKGQDVVCVYVAIG 200          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_PROMM (ATP synthase subunit alpha OS=Prochlorococcus marinus (strain MIT 9313) GN=atpA PE=3 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 2.257e-77
Identity = 138/200 (69.00%), Postives = 176/200 (88.00%), Query Frame = 1
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M +I+ DEIS I++++I  Y++ V + N+GTVLQ+GDGIAR+YGL++VMAGELVEFE+GT GIALNLE  NVG VLMG+G+ IQEGS+VKATGKIA +PVS+  LGRV+  L +P+DG+G+I ++ESRLIES APGII R+SV+EPLQTG+ +IDSMIPIGRGQRELIIGDRQTGKTA+A DTI+NQ+G++V+CVYVA+G
Sbjct:    1 MVSIRPDEISAILKQQISDYDKSVSVSNVGTVLQIGDGIARVYGLEQVMAGELVEFEDGTEGIALNLEDDNVGAVLMGEGVGIQEGSTVKATGKIASVPVSDEMLGRVVTPLGQPMDGKGDIPSTESRLIESIAPGIIKRKSVHEPLQTGITSIDSMIPIGRGQRELIIGDRQTGKTAIAIDTIINQKGEDVVCVYVAVG 200          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_PROM5 (ATP synthase subunit alpha OS=Prochlorococcus marinus (strain MIT 9515) GN=atpA PE=3 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 2.257e-77
Identity = 138/200 (69.00%), Postives = 174/200 (87.00%), Query Frame = 1
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M +I+ DEIS+I++++I  Y++ V + N+GTVLQ+GDGIARIYGLD+VMAGEL+EFE+GT GIALNLE  NVG VLMG+ L +QEGS+VK+TGKIA +PV EA  GRV+N L +PIDG+GEI  S++RLIE  APGII RRSV+EP+QTG+ +ID+MIP+GRGQRELIIGDRQTGKTA+A DTI+NQ+GQ+V+CVYVAIG
Sbjct:    1 MVSIRPDEISSILKQQITDYDQSVSVSNVGTVLQIGDGIARIYGLDQVMAGELLEFEDGTEGIALNLEDDNVGAVLMGEALGVQEGSNVKSTGKIASVPVGEAMKGRVVNPLGQPIDGKGEIPTSDNRLIEEMAPGIIKRRSVHEPMQTGITSIDAMIPVGRGQRELIIGDRQTGKTAIAIDTIINQKGQDVVCVYVAIG 200          
The following BLAST results are available for this feature:
BLAST of CX069529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPA_PROMA2.666e-7869.50ATP synthase subunit alpha OS=Prochlorococcus mari... [more]
ATPA_CHLRE2.666e-7871.13ATP synthase subunit alpha, chloroplastic OS=Chlam... [more]
ATPA_ODOSI3.482e-7871.00ATP synthase subunit alpha, chloroplastic OS=Odont... [more]
ATPA_CYAP83.482e-7870.00ATP synthase subunit alpha OS=Cyanothece sp. (stra... [more]
ATPA_PROMT1.013e-7769.50ATP synthase subunit alpha OS=Prochlorococcus mari... [more]
ATPA_PROM11.323e-7769.00ATP synthase subunit alpha OS=Prochlorococcus mari... [more]
ATPA_PROM41.728e-7768.50ATP synthase subunit alpha OS=Prochlorococcus mari... [more]
ATPA_PROMP2.257e-7769.00ATP synthase subunit alpha OS=Prochlorococcus mari... [more]
ATPA_PROMM2.257e-7769.00ATP synthase subunit alpha OS=Prochlorococcus mari... [more]
ATPA_PROM52.257e-7769.00ATP synthase subunit alpha OS=Prochlorococcus mari... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_11A09_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11A09-B17-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069529 ID=CX069529; Name=CX069529; organism=Citrus sinensis; type=EST; length=804bp
GTCCGACAACGGGTTTTCCAACAAGCTTTACAAGGAGCGCTCGGAACTCT
GAATAGTTGTTTGAACAAGGAGTTACATTTACGTACCATTAGTGCCAATA
TTGGCATGTTTGGAGCGATGAAAGAAATAACTGATTAGTCCTTTTACTGT
AGGCACATTATTTTTTTTTTTTTTTTTAAGAAAAAAAAGAATTAAGAAAT
ACTTATGACAACAATTAAAGCCGACGAAATTAGTAATATTATCCGCGAAC
GTATTGAGCAATATAATAGAGAAGTAAAGATTGTAAATATTGGGACCGTA
CTTCAAGTAGGCGACGGCATCGCCCGTATTTATGGTCTTGATGAAGTAAT
GGCAGGTGAATTAGTAGAATTTGAAGAGGGTACAATAGGCATTGCTCTGA
ATTTGGAATCAACTAATGTTGGTGTTGTTTTAATGGGTGACGGTTTAATG
ATACAAGAAGGAAGTTCTGTAAAAGCAACCGGAAAAATTGCTCAGATACC
AGTAAGCGAGGCTTATTTAGGTCGTGTTATAAATGCCCTGGCTAAACCTA
TTGATGGTCGAGGTGAAATTTCAGCTTCTGAATCTCGATTAATTGAATCC
CCTGCTCCGGGTATTATTTCGAGACGTTCCGTATATGAGCCTCTTCAAAC
AGGACTTATTGCTATTGATTCGATGATCCCTATCGGACGCGGTCAGCGAG
AATTAATTATTGGGGACAGACAGACCGGTAAAACGGCAGTAGCCACGGAT
ACGATTCTCAACCAACAAGGGCAAAATGTAATATGTGTTTATGTAGCTAT
TGGT
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