CX069529

Overview
NameCX069529
Unique NameCX069529
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_CAPBU (ATP synthase subunit alpha, chloroplastic OS=Capsella bursa-pastoris GN=atpA PE=3 SV=1)

HSP 1 Score: 367.851 bits (943), Expect = 3.823e-101
Identity = 192/200 (96.00%), Postives = 195/200 (97.50%), Query Frame = 1 
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M TI+ADEISNIIRERIEQYNREV IVN GTVLQVGDGIARIYGLDEVMAGELVEF+EGTIGIALNLES NVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALA PIDGRG+ISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG
Sbjct:    1 MVTIRADEISNIIRERIEQYNREVTIVNTGTVLQVGDGIARIYGLDEVMAGELVEFDEGTIGIALNLESNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALANPIDGRGKISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 200
[Close]
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_PANGI (ATP synthase subunit alpha, chloroplastic OS=Panax ginseng GN=atpA PE=3 SV=1)

HSP 1 Score: 367.466 bits (942), Expect = 4.993e-101
Identity = 190/200 (95.00%), Postives = 196/200 (98.00%), Query Frame = 1 
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M TI+ADEISNIIRERIEQYNREVKIVN GTVLQVGDGIARI+GLDEVMAGELVEFEEGT+GIALNLES NVGVVLMGDGL+IQEGSSVKATG+IAQIPVSEAYLGRV+NALAKPIDGRGEISASE RLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG
Sbjct:    1 MVTIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGTVGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVVNALAKPIDGRGEISASEYRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 200
[Close]
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_LACSA (ATP synthase subunit alpha, chloroplastic OS=Lactuca sativa GN=atpA PE=3 SV=1)

HSP 1 Score: 367.081 bits (941), Expect = 6.520e-101
Identity = 191/200 (95.50%), Postives = 197/200 (98.50%), Query Frame = 1 
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M TI+ADEISNIIRERIEQYNREVKIVN GTVLQVGDGIARI+GLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGL+IQEGSSVKATG+IAQIPVSEAYLGRVINALAKPIDGRGEIS+SE RLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQG+NVICVYVAIG
Sbjct:    1 MVTIQADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISSSEYRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGKNVICVYVAIG 200
[Close]
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_JASNU (ATP synthase subunit alpha, chloroplastic OS=Jasminum nudiflorum GN=atpA PE=3 SV=1)

HSP 1 Score: 367.081 bits (941), Expect = 6.520e-101
Identity = 189/200 (94.50%), Postives = 197/200 (98.50%), Query Frame = 1 
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M +I+ADEISN +RERIEQYNREVKIVN GTVLQVGDGIARI+GLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMI+EGSSVKATG+IAQIPVSEAYLGRV+NALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGL+AIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG
Sbjct:    1 MVSIRADEISNTLRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIEEGSSVKATGRIAQIPVSEAYLGRVLNALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLVAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 200
[Close]
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_LIRTU (ATP synthase subunit alpha, chloroplastic OS=Liriodendron tulipifera GN=atpA PE=3 SV=1)

HSP 1 Score: 366.696 bits (940), Expect = 8.516e-101
Identity = 191/200 (95.50%), Postives = 196/200 (98.00%), Query Frame = 1 
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M TI+ADEISNIIRERIEQYNREV IVN GTVLQVGDGIARI+GLDEVMAGELVEFEEGTIGIALNLES NVGVVLMGDGL+IQEGSSVKATG+IAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ+GQNVICVYVAIG
Sbjct:    1 MVTIRADEISNIIRERIEQYNREVTIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQKGQNVICVYVAIG 200
[Close]
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_CRUWA (ATP synthase subunit alpha, chloroplastic OS=Crucihimalaya wallichii GN=atpA PE=3 SV=1)

HSP 1 Score: 366.696 bits (940), Expect = 8.516e-101
Identity = 192/200 (96.00%), Postives = 194/200 (97.00%), Query Frame = 1 
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M TI+ADEISNIIRERIEQYNREV IVN GTVLQVGDGIARIYGLDEVMAGELVEF EGTIGIALNLES NVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALA PIDGRG+ISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG
Sbjct:    1 MVTIRADEISNIIRERIEQYNREVTIVNTGTVLQVGDGIARIYGLDEVMAGELVEFAEGTIGIALNLESNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALANPIDGRGKISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 200
[Close]
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_CHLSC (ATP synthase subunit alpha, chloroplastic OS=Chloranthus spicatus GN=atpA PE=3 SV=1)

HSP 1 Score: 366.311 bits (939), Expect = 1.112e-100
Identity = 190/200 (95.00%), Postives = 196/200 (98.00%), Query Frame = 1 
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M T++ADEISNIIRERIEQYNREVK+VN GTVLQVGDGIARI+GLDEVMAGELVEFEEGTIGIALNLES NVGVVLMGDGLMIQEGSSVKATG+IAQIPVSEAYLGRVINALAKPIDGRGEISA ESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ+GQNVICVYVAIG
Sbjct:    1 MVTMRADEISNIIRERIEQYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISAYESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQKGQNVICVYVAIG 200
[Close]
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_PIPCE (ATP synthase subunit alpha, chloroplastic OS=Piper cenocladum GN=atpA PE=3 SV=1)

HSP 1 Score: 365.925 bits (938), Expect = 1.453e-100
Identity = 190/200 (95.00%), Postives = 196/200 (98.00%), Query Frame = 1 
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M T++ADEISNIIRERIEQYNREV IVN GTVLQVGDGIARI+GLDEVMAGELVEF+EGTIGIALNLES NVGVVLMGDGLMIQEGSSVKATG+IAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ+GQNVICVYVAIG
Sbjct:    1 METLRADEISNIIRERIEQYNREVNIVNTGTVLQVGDGIARIHGLDEVMAGELVEFDEGTIGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQKGQNVICVYVAIG 200
[Close]
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_OENBI (ATP synthase subunit alpha, chloroplastic OS=Oenothera biennis GN=atpA PE=3 SV=1)

HSP 1 Score: 365.54 bits (937), Expect = 1.897e-100
Identity = 190/200 (95.00%), Postives = 195/200 (97.50%), Query Frame = 1 
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M TI+ADEISNIIRERIEQYNREVKIVN GTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLES NVGVVLMGDGL+IQEGSSVKATG+IAQIPVSEAYLGRVINALAKPIDGRGEI +SESRLIESPAPGIISRRSVYEPLQTGLIAID+MIPIGRGQRELIIGDRQTGKTAVATDTILNQQG NVICVYVAIG
Sbjct:    1 MATIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESKNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEIYSSESRLIESPAPGIISRRSVYEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGNNVICVYVAIG 200
[Close]
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_CALFG (ATP synthase subunit alpha, chloroplastic OS=Calycanthus floridus var. glaucus GN=atpA PE=3 SV=1)

HSP 1 Score: 365.54 bits (937), Expect = 1.897e-100
Identity = 190/200 (95.00%), Postives = 195/200 (97.50%), Query Frame = 1 
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M TI+ADEISNIIRERIEQYNREVKIVN GTVLQVGDGIARI+GLDEVMAGELVEFEEGTIGIALNLES NVGVVLMGDGL IQEGSSVKATG+IAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGK AVATDTILNQ+GQNV+CVYVAIG
Sbjct:    1 MVTIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLTIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKAAVATDTILNQKGQNVVCVYVAIG 200
The following BLAST results are available for this feature:
BLAST of CX069529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPA_CAPBU3.823e-10196.00ATP synthase subunit alpha, chloroplastic OS=Capse... [more]
ATPA_PANGI4.993e-10195.00ATP synthase subunit alpha, chloroplastic OS=Panax... [more]
ATPA_LACSA6.520e-10195.50ATP synthase subunit alpha, chloroplastic OS=Lactu... [more]
ATPA_JASNU6.520e-10194.50ATP synthase subunit alpha, chloroplastic OS=Jasmi... [more]
ATPA_LIRTU8.516e-10195.50ATP synthase subunit alpha, chloroplastic OS=Lirio... [more]
ATPA_CRUWA8.516e-10196.00ATP synthase subunit alpha, chloroplastic OS=Cruci... [more]
ATPA_CHLSC1.112e-10095.00ATP synthase subunit alpha, chloroplastic OS=Chlor... [more]
ATPA_PIPCE1.453e-10095.00ATP synthase subunit alpha, chloroplastic OS=Piper... [more]
ATPA_OENBI1.897e-10095.00ATP synthase subunit alpha, chloroplastic OS=Oenot... [more]
ATPA_CALFG1.897e-10095.00ATP synthase subunit alpha, chloroplastic OS=Calyc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_11A09_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11A09-B17-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069529 ID=CX069529; Name=CX069529; organism=Citrus sinensis; type=EST; length=804bp
GTCCGACAACGGGTTTTCCAACAAGCTTTACAAGGAGCGCTCGGAACTCT
GAATAGTTGTTTGAACAAGGAGTTACATTTACGTACCATTAGTGCCAATA
TTGGCATGTTTGGAGCGATGAAAGAAATAACTGATTAGTCCTTTTACTGT
AGGCACATTATTTTTTTTTTTTTTTTTAAGAAAAAAAAGAATTAAGAAAT
ACTTATGACAACAATTAAAGCCGACGAAATTAGTAATATTATCCGCGAAC
GTATTGAGCAATATAATAGAGAAGTAAAGATTGTAAATATTGGGACCGTA
CTTCAAGTAGGCGACGGCATCGCCCGTATTTATGGTCTTGATGAAGTAAT
GGCAGGTGAATTAGTAGAATTTGAAGAGGGTACAATAGGCATTGCTCTGA
ATTTGGAATCAACTAATGTTGGTGTTGTTTTAATGGGTGACGGTTTAATG
ATACAAGAAGGAAGTTCTGTAAAAGCAACCGGAAAAATTGCTCAGATACC
AGTAAGCGAGGCTTATTTAGGTCGTGTTATAAATGCCCTGGCTAAACCTA
TTGATGGTCGAGGTGAAATTTCAGCTTCTGAATCTCGATTAATTGAATCC
CCTGCTCCGGGTATTATTTCGAGACGTTCCGTATATGAGCCTCTTCAAAC
AGGACTTATTGCTATTGATTCGATGATCCCTATCGGACGCGGTCAGCGAG
AATTAATTATTGGGGACAGACAGACCGGTAAAACGGCAGTAGCCACGGAT
ACGATTCTCAACCAACAAGGGCAAAATGTAATATGTGTTTATGTAGCTAT
TGGT
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