CX069529

Overview
NameCX069529
Unique NameCX069529
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3888 contig Csv1_Contig3888:427..1232. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_TOBAC (ATP synthase subunit alpha, chloroplastic OS=Nicotiana tabacum GN=atpA PE=2 SV=2)

HSP 1 Score: 365.155 bits (936), Expect = 2.478e-100
Identity = 191/200 (95.50%), Postives = 195/200 (97.50%), Query Frame = 1 
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M TI+ADEISNIIRERIEQYNREVKIVN GTVLQVGDGIARI+GLDEVMAGELVEFEEGTIGIALNLES NVGVVLMGDGL+IQEGSSVKATG+IAQIPVSEAYLGRVINALAKPIDGRGEISASE RLIES APGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG
Sbjct:    1 MVTIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASEFRLIESAAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 200
[Close]
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_NICSY (ATP synthase subunit alpha, chloroplastic OS=Nicotiana sylvestris GN=atpA PE=3 SV=1)

HSP 1 Score: 365.155 bits (936), Expect = 2.478e-100
Identity = 191/200 (95.50%), Postives = 195/200 (97.50%), Query Frame = 1 
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M TI+ADEISNIIRERIEQYNREVKIVN GTVLQVGDGIARI+GLDEVMAGELVEFEEGTIGIALNLES NVGVVLMGDGL+IQEGSSVKATG+IAQIPVSEAYLGRVINALAKPIDGRGEISASE RLIES APGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG
Sbjct:    1 MVTIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASEFRLIESAAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 200
[Close]
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_LOTJA (ATP synthase subunit alpha, chloroplastic OS=Lotus japonicus GN=atpA PE=3 SV=1)

HSP 1 Score: 365.155 bits (936), Expect = 2.478e-100
Identity = 189/200 (94.50%), Postives = 194/200 (97.00%), Query Frame = 1 
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M TI+ADEIS IIRERIEQYN E+KIVN GTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLES NVGVVLMGDGLMIQEGSSVKATG+IAQIPVSE YLGRVINALAKPIDGRGEIS+SESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVA+G
Sbjct:    1 MVTIRADEISKIIRERIEQYNTEIKIVNTGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESKNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEGYLGRVINALAKPIDGRGEISSSESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAVG 200
[Close]
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_ILLOL (ATP synthase subunit alpha, chloroplastic OS=Illicium oligandrum GN=atpA PE=3 SV=1)

HSP 1 Score: 365.155 bits (936), Expect = 2.478e-100
Identity = 191/200 (95.50%), Postives = 195/200 (97.50%), Query Frame = 1 
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M TI+ADEISNIIRERIEQYNREVKIVN GTVLQVGDGIARI+GLDEVMAGELVEFEEGTIGIA N ES NVGVVLMGDGLMIQEGSSVKATG+IAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ+GQNVICVYVAIG
Sbjct:    1 MVTIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGTIGIAPNSESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQKGQNVICVYVAIG 200
[Close]
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_CUCSA (ATP synthase subunit alpha, chloroplastic OS=Cucumis sativus GN=atpA PE=3 SV=1)

HSP 1 Score: 365.155 bits (936), Expect = 2.478e-100
Identity = 190/200 (95.00%), Postives = 195/200 (97.50%), Query Frame = 1 
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M TI+ADEISNIIRERIEQY REVKIVN GTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLES NVGVVLMGDGL+IQEGSSVKATG+IAQIPVSEAYLGRVINALAKPIDGRGEIS+S+SRLIESPAPGII RRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG
Sbjct:    1 METIRADEISNIIRERIEQYTREVKIVNTGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISSSDSRLIESPAPGIILRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 200
[Close]
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_SOLTU (ATP synthase subunit alpha, chloroplastic OS=Solanum tuberosum GN=atpA PE=3 SV=1)

HSP 1 Score: 364.77 bits (935), Expect = 3.236e-100
Identity = 190/200 (95.00%), Postives = 195/200 (97.50%), Query Frame = 1 
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M TI+ADEISNIIRERIEQYNREVKIVN GTVLQVGDGIARI+GLDEVMAGELVEFEEGTIGIALNLES NVGVVLMGDGL+IQEGSSVKATG+IAQIPVSEAYLGRV+NALAKPIDGRGEISASE RLIES APGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG
Sbjct:    1 MVTIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVVNALAKPIDGRGEISASEFRLIESAAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 200
[Close]
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_SOLLC (ATP synthase subunit alpha, chloroplastic OS=Solanum lycopersicum GN=atpA PE=3 SV=1)

HSP 1 Score: 364.77 bits (935), Expect = 3.236e-100
Identity = 190/200 (95.00%), Postives = 195/200 (97.50%), Query Frame = 1 
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M TI+ADEISNIIRERIEQYNREVKIVN GTVLQVGDGIARI+GLDEVMAGELVEFEEGTIGIALNLES NVGVVLMGDGL+IQEGSSVKATG+IAQIPVSEAYLGRV+NALAKPIDGRGEISASE RLIES APGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG
Sbjct:    1 MVTIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVVNALAKPIDGRGEISASEFRLIESAAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 200
[Close]
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_SOLBU (ATP synthase subunit alpha, chloroplastic OS=Solanum bulbocastanum GN=atpA PE=3 SV=1)

HSP 1 Score: 364.77 bits (935), Expect = 3.236e-100
Identity = 190/200 (95.00%), Postives = 195/200 (97.50%), Query Frame = 1 
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M TI+ADEISNIIRERIEQYNREVKIVN GTVLQVGDGIARI+GLDEVMAGELVEFEEGTIGIALNLES NVGVVLMGDGL+IQEGSSVKATG+IAQIPVSEAYLGRV+NALAKPIDGRGEISASE RLIES APGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG
Sbjct:    1 MVTIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVVNALAKPIDGRGEISASEFRLIESAAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 200
[Close]
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_NICTO (ATP synthase subunit alpha, chloroplastic OS=Nicotiana tomentosiformis GN=atpA PE=3 SV=1)

HSP 1 Score: 364.77 bits (935), Expect = 3.236e-100
Identity = 190/200 (95.00%), Postives = 195/200 (97.50%), Query Frame = 1 
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M TI+ADEISNIIRERIEQYNREVK+VN GTVLQVGDGIARI+GLDEVMAGELVEFEEGTIGIALNLES NVGVVLMGDGL+IQEGSSVKATG+IAQIPVSEAYLGRVINALAKPIDGRGEISASE RLIES APGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG
Sbjct:    1 MVTIRADEISNIIRERIEQYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASEFRLIESAAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 200
[Close]
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_DAUCA (ATP synthase subunit alpha, chloroplastic OS=Daucus carota GN=atpA PE=3 SV=1)

HSP 1 Score: 364.77 bits (935), Expect = 3.236e-100
Identity = 188/200 (94.00%), Postives = 196/200 (98.00%), Query Frame = 1 
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            M TI+ADEIS IIRERIE+YNREVKIVN GTVLQVGDGIARI+GLDEVMAGELVEF+EGT+GIALNLESTNVGVVLMGDGL+IQEGSSVKATG+IAQIPVSEAYLGRV+NALAKPIDGRGEISASE RLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG
Sbjct:    1 MVTIRADEISKIIRERIEEYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFQEGTVGIALNLESTNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVVNALAKPIDGRGEISASEYRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 200
The following BLAST results are available for this feature:
BLAST of CX069529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPA_TOBAC2.478e-10095.50ATP synthase subunit alpha, chloroplastic OS=Nicot... [more]
ATPA_NICSY2.478e-10095.50ATP synthase subunit alpha, chloroplastic OS=Nicot... [more]
ATPA_LOTJA2.478e-10094.50ATP synthase subunit alpha, chloroplastic OS=Lotus... [more]
ATPA_ILLOL2.478e-10095.50ATP synthase subunit alpha, chloroplastic OS=Illic... [more]
ATPA_CUCSA2.478e-10095.00ATP synthase subunit alpha, chloroplastic OS=Cucum... [more]
ATPA_SOLTU3.236e-10095.00ATP synthase subunit alpha, chloroplastic OS=Solan... [more]
ATPA_SOLLC3.236e-10095.00ATP synthase subunit alpha, chloroplastic OS=Solan... [more]
ATPA_SOLBU3.236e-10095.00ATP synthase subunit alpha, chloroplastic OS=Solan... [more]
ATPA_NICTO3.236e-10095.00ATP synthase subunit alpha, chloroplastic OS=Nicot... [more]
ATPA_DAUCA3.236e-10094.00ATP synthase subunit alpha, chloroplastic OS=Daucu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_11A09_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11A09-B17-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069529 ID=CX069529; Name=CX069529; organism=Citrus sinensis; type=EST; length=804bp
GTCCGACAACGGGTTTTCCAACAAGCTTTACAAGGAGCGCTCGGAACTCT
GAATAGTTGTTTGAACAAGGAGTTACATTTACGTACCATTAGTGCCAATA
TTGGCATGTTTGGAGCGATGAAAGAAATAACTGATTAGTCCTTTTACTGT
AGGCACATTATTTTTTTTTTTTTTTTTAAGAAAAAAAAGAATTAAGAAAT
ACTTATGACAACAATTAAAGCCGACGAAATTAGTAATATTATCCGCGAAC
GTATTGAGCAATATAATAGAGAAGTAAAGATTGTAAATATTGGGACCGTA
CTTCAAGTAGGCGACGGCATCGCCCGTATTTATGGTCTTGATGAAGTAAT
GGCAGGTGAATTAGTAGAATTTGAAGAGGGTACAATAGGCATTGCTCTGA
ATTTGGAATCAACTAATGTTGGTGTTGTTTTAATGGGTGACGGTTTAATG
ATACAAGAAGGAAGTTCTGTAAAAGCAACCGGAAAAATTGCTCAGATACC
AGTAAGCGAGGCTTATTTAGGTCGTGTTATAAATGCCCTGGCTAAACCTA
TTGATGGTCGAGGTGAAATTTCAGCTTCTGAATCTCGATTAATTGAATCC
CCTGCTCCGGGTATTATTTCGAGACGTTCCGTATATGAGCCTCTTCAAAC
AGGACTTATTGCTATTGATTCGATGATCCCTATCGGACGCGGTCAGCGAG
AATTAATTATTGGGGACAGACAGACCGGTAAAACGGCAGTAGCCACGGAT
ACGATTCTCAACCAACAAGGGCAAAATGTAATATGTGTTTATGTAGCTAT
TGGT
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