CX069529

Overview
NameCX069529
Unique NameCX069529
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPAM_MARPO (ATP synthase subunit alpha, mitochondrial OS=Marchantia polymorpha GN=ATPA PE=3 SV=2)

HSP 1 Score: 230.335 bits (586), Expect = 9.525e-60
Identity = 114/209 (54.55%), Postives = 152/209 (72.73%), Query Frame = 1
Query:  205 MTTIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQ---------GQNVICVYVAIG 804
            M  +   E+S ++ +RI  Y  ++++  IG V+ VGDGIAR+YGL+++ AGE+VEF  G  G+ALNLE+ NVG+V+ G    I+EG  VK TG I  +PV +  LGRV++AL  PIDG+G +SA E R +E  APGII+R+SV+EP+QTGL A+DS++PIGRGQRELIIGDRQTGKTA+A DTILNQ+          + + CVYVAIG
Sbjct:    1 MNKLAGAELSTLLEQRITNYYTKLQVDEIGRVVSVGDGIARVYGLNKIQAGEMVEFASGVKGMALNLENENVGIVIFGSDTAIKEGDIVKRTGSIVDVPVGKGMLGRVVDALGVPIDGKGALSAVERRRVEVKAPGIIARKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINAQGTSDSEKLYCVYVAIG 209          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA2_RHOBA (ATP synthase subunit alpha 2 OS=Rhodopirellula baltica GN=atpA2 PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 9.525e-60
Identity = 108/195 (55.38%), Postives = 148/195 (75.90%), Query Frame = 1
Query:  220 ADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            +DEI+++++  IEQ++ ++ +  +GTVL+VGDGIAR+YGL  VMAGE+VEF  G+IG+A NLE  +VGV+++GD L I+EG  VKA G +  +P  +A +GRV++ L  P+DG+G +    +R +E  A G+  R+ V EPLQTG+ AIDSM PIGRGQRELIIGDR+TGKTA+A D ILNQ+GQ V C Y+AIG
Sbjct:    5 SDEIASVLQAEIEQFDNKIDVREVGTVLEVGDGIARVYGLSGVMAGEMVEFANGSIGLAFNLEENSVGVIILGDYLTIEEGQEVKALGTLLSVPAGDAVIGRVLDPLGNPLDGKGPVQTDITRPVEIIATGVAERKPVTEPLQTGIKAIDSMTPIGRGQRELIIGDRKTGKTAIAIDAILNQKGQGVKCFYIAIG 199          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_PROMO (ATP synthase subunit alpha, sodium ion specific OS=Propionigenium modestum GN=atpA PE=1 SV=2)

HSP 1 Score: 229.95 bits (585), Expect = 1.244e-59
Identity = 113/197 (57.36%), Postives = 146/197 (74.11%), Query Frame = 1
Query:  214 IKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            I+ +EIS II+  IE Y + + +   G+V+QVGDGIARIYGL    AGEL+EF  G  G+ALNLE  NVG V++GD   ++EG  V+ATG+IA +   EA LGRV+N+L +PIDG+GE+   +   ++  A GIISR+ V+EPLQTG+ +ID M+PIGRGQRELIIGDRQTGKTAVA D I+NQ+   V C+YVAIG
Sbjct:    3 IRPEEISGIIKTEIENYKKSLDVKTSGSVVQVGDGIARIYGLSNAKAGELLEFPNGITGMALNLEENNVGAVILGDPTGVKEGDEVRATGQIAAVGAGEALLGRVVNSLGEPIDGKGELKTEKMMPLDRKAYGIISRKPVHEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAVALDAIINQKDTGVKCIYVAIG 199          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_LEUMM (ATP synthase subunit alpha OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=atpA PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.244e-59
Identity = 110/197 (55.84%), Postives = 155/197 (78.68%), Query Frame = 1
Query:  214 IKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            I+A+EIS +I++++E+++  + +  +GTV  VGDG+AR  GL   +AGELVEF  GT G+A NLES+ VG++++G    I+EG +VK TG+I ++PV E  +GRV+NAL +PIDG GEI   ++R +E  APG++ R+SV EPLQTG+ AID+++PIGRGQRELIIGDR+TGKT++A DTILNQ+ QN+I +YVAIG
Sbjct:    3 IQAEEISALIKQQLEKFDTTLTVEEVGTVTYVGDGVARATGLANALAGELVEFANGTYGMAQNLESSEVGIIILGGFDDIREGDTVKRTGRIMEVPVGEQLIGRVVNALGQPIDGLGEIKTDKTRPVEVKAPGVMERKSVSEPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAIDTILNQKDQNMIVIYVAIG 199          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_PARDP (ATP synthase subunit alpha OS=Paracoccus denitrificans (strain Pd 1222) GN=atpA PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.625e-59
Identity = 112/206 (54.37%), Postives = 154/206 (74.76%), Query Frame = 1
Query:  214 IKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQN---------VICVYVAIG 804
            I+A EIS I++++I+ + ++ ++  +G VL VGDGIAR+YGLD+V AGE+VEF  G  G+ LNLE+ NVGVV+ GD   I+EG +VK TG I ++P  +  LGRV++AL  PIDG+G ++ASE R+ +  APGI+ R+SV+EP+ TGL ++D+MIP+GRGQRELIIGDRQTGKTA+A DTILNQ   N         + C+YVA+G
Sbjct:    3 IQAAEISAILKDQIKNFGQDAEVAEVGQVLSVGDGIARVYGLDKVQAGEMVEFPGGIRGMVLNLETDNVGVVIFGDDRDIKEGDTVKRTGAIVEVPAGKELLGRVVDALGNPIDGKGPLNASERRIADVKAPGIMPRKSVHEPMATGLKSVDAMIPVGRGQRELIIGDRQTGKTAIALDTILNQANYNGREADGMKTLHCIYVAVG 208          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPAM_SOYBN (ATP synthase subunit alpha, mitochondrial OS=Glycine max GN=ATPA PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.625e-59
Identity = 115/207 (55.56%), Postives = 149/207 (71.98%), Query Frame = 1
Query:  211 TIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQN---------VICVYVAIG 804
            +++A E++ ++  RI  +    ++  IG V+ VGDGIAR+YGL+E+ AGE+VEF  G  GIALNLE+ NVG+V+ G    I+EG  VK TG I  +P  +A LGRV++AL  PIDGRG +S  E R +E  APGII R+SV+EP+QTGL A+DS++PIGRGQRELIIGDRQTGKTA+A DTILNQ+  N         + CVYVAIG
Sbjct:    4 SVRAAELTTLLESRITNFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIG 210          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPAM_BETVU (ATP synthase subunit alpha, mitochondrial OS=Beta vulgaris GN=ATPA PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.625e-59
Identity = 114/205 (55.61%), Postives = 148/205 (72.20%), Query Frame = 1
Query:  217 KADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ---------QGQNVICVYVAIG 804
            +A E++N++  RI  +    ++  IG V+ VGDGIAR+YGL+E+ AGE+VEF  G  GIALNLE+ NVG+V+ G    I+EG  VK TG I  +P  +A LGRV++AL  PIDGRG +S  E R +E  APGII R+SV+EP+QTGL A+DS++PIGRGQRELIIGDRQTGKTA+A DTILNQ         + + + CVYVA+G
Sbjct:    6 RAAELTNLLESRITNFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCVYVAVG 210          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_THEM4 (ATP synthase subunit alpha OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=atpA PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.122e-59
Identity = 114/198 (57.58%), Postives = 148/198 (74.75%), Query Frame = 1
Query:  214 IKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEF-EEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            I   EI  ++  +IE +  E+ + ++G V+QVGDGIAR YGL+ VMA E+VEF E GTIG+A NLE  NVG++++GD   I+EG +VK   +I Q+PV EA LGRV+N L +P+DG G I A E R +E  APG+I R+ V  PLQTG+  ID++IPIGRGQRELIIGDRQTGKTA+A DTI+NQ+G+ V C+YVAIG
Sbjct:    3 INPGEIVKVLESKIEGFKEEINLNDVGKVIQVGDGIARAYGLNNVMANEMVEFVETGTIGMAFNLEEDNVGIIILGDYKDIKEGYTVKRLNRIMQVPVGEALLGRVVNPLGEPLDGLGPIDAKEYRDVEVKAPGVIYRKPVDTPLQTGIKLIDALIPIGRGQRELIIGDRQTGKTAIAIDTIINQKGKGVYCIYVAIG 200          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_RHOBL (ATP synthase subunit alpha OS=Rhodopseudomonas blastica GN=atpA PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.122e-59
Identity = 117/207 (56.52%), Postives = 149/207 (71.98%), Query Frame = 1
Query:  214 IKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ----------QGQNVICVYVAIG 804
            I+A EIS I++E+I+ + ++ ++  +G VL VGDGIAR+YGLD V AGE+VEF  G  G+ALNLE  NVG+V+ GD   I+EG +VK T  I  +P     LGRV++AL  PIDG+G I ASE R+ +  APGII R+ V+EP+ TGL A+D+MIPIGRGQRELIIGDRQTGKTAVA DTILNQ          + + + CVYVAIG
Sbjct:    3 IQAAEISAILKEQIKNFGKDAEVAEVGRVLSVGDGIARVYGLDNVQAGEMVEFPGGIRGMALNLEVDNVGIVIFGDDRDIKEGDTVKRTKSIVDVPAGNGLLGRVVDALGNPIDGKGPIVASERRIADVKAPGIIPRKGVHEPMATGLKAVDAMIPIGRGQRELIIGDRQTGKTAVALDTILNQKVYNDAAGDDESKKLYCVYVAIG 209          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_RALEJ (ATP synthase subunit alpha OS=Ralstonia eutropha (strain JMP134) GN=atpA PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.122e-59
Identity = 111/197 (56.35%), Postives = 148/197 (75.13%), Query Frame = 1
Query:  214 IKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            +   EIS +I+ RI     + ++ N GTV+ V DGI R++GL  VM GE++EF   T G+ALNLE  +VG V++GD   I EG +VK TG+I ++PV +  LGRV+N L +PIDG+G I+A E+ +IE  APG+I+R+SV +P+QTGL +IDSM+PIGRGQRELIIGDRQTGKTAVA D I+NQ+G+ + CVYVAIG
Sbjct:    3 LNPSEISELIKSRISGLGADAEVRNTGTVISVTDGICRVHGLSGVMQGEMLEFPGNTFGLALNLERDSVGAVVLGDYEHISEGDTVKCTGRILEVPVGKELLGRVVNTLGQPIDGKGPINAKETDVIEKVAPGVIARQSVSQPVQTGLKSIDSMVPIGRGQRELIIGDRQTGKTAVAVDAIINQKGKGIFCVYVAIG 199          
The following BLAST results are available for this feature:
BLAST of CX069529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPAM_MARPO9.525e-6054.55ATP synthase subunit alpha, mitochondrial OS=March... [more]
ATPA2_RHOBA9.525e-6055.38ATP synthase subunit alpha 2 OS=Rhodopirellula bal... [more]
ATPA_PROMO1.244e-5957.36ATP synthase subunit alpha, sodium ion specific OS... [more]
ATPA_LEUMM1.244e-5955.84ATP synthase subunit alpha OS=Leuconostoc mesenter... [more]
ATPA_PARDP1.625e-5954.37ATP synthase subunit alpha OS=Paracoccus denitrifi... [more]
ATPAM_SOYBN1.625e-5955.56ATP synthase subunit alpha, mitochondrial OS=Glyci... [more]
ATPAM_BETVU1.625e-5955.61ATP synthase subunit alpha, mitochondrial OS=Beta ... [more]
ATPA_THEM42.122e-5957.58ATP synthase subunit alpha OS=Thermosipho melanesi... [more]
ATPA_RHOBL2.122e-5956.52ATP synthase subunit alpha OS=Rhodopseudomonas bla... [more]
ATPA_RALEJ2.122e-5956.35ATP synthase subunit alpha OS=Ralstonia eutropha (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_11A09_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11A09-B17-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069529 ID=CX069529; Name=CX069529; organism=Citrus sinensis; type=EST; length=804bp
GTCCGACAACGGGTTTTCCAACAAGCTTTACAAGGAGCGCTCGGAACTCT
GAATAGTTGTTTGAACAAGGAGTTACATTTACGTACCATTAGTGCCAATA
TTGGCATGTTTGGAGCGATGAAAGAAATAACTGATTAGTCCTTTTACTGT
AGGCACATTATTTTTTTTTTTTTTTTTAAGAAAAAAAAGAATTAAGAAAT
ACTTATGACAACAATTAAAGCCGACGAAATTAGTAATATTATCCGCGAAC
GTATTGAGCAATATAATAGAGAAGTAAAGATTGTAAATATTGGGACCGTA
CTTCAAGTAGGCGACGGCATCGCCCGTATTTATGGTCTTGATGAAGTAAT
GGCAGGTGAATTAGTAGAATTTGAAGAGGGTACAATAGGCATTGCTCTGA
ATTTGGAATCAACTAATGTTGGTGTTGTTTTAATGGGTGACGGTTTAATG
ATACAAGAAGGAAGTTCTGTAAAAGCAACCGGAAAAATTGCTCAGATACC
AGTAAGCGAGGCTTATTTAGGTCGTGTTATAAATGCCCTGGCTAAACCTA
TTGATGGTCGAGGTGAAATTTCAGCTTCTGAATCTCGATTAATTGAATCC
CCTGCTCCGGGTATTATTTCGAGACGTTCCGTATATGAGCCTCTTCAAAC
AGGACTTATTGCTATTGATTCGATGATCCCTATCGGACGCGGTCAGCGAG
AATTAATTATTGGGGACAGACAGACCGGTAAAACGGCAGTAGCCACGGAT
ACGATTCTCAACCAACAAGGGCAAAATGTAATATGTGTTTATGTAGCTAT
TGGT
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