CX069529

Overview
NameCX069529
Unique NameCX069529
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPAM_PHAVU (ATP synthase subunit alpha, mitochondrial OS=Phaseolus vulgaris GN=ATPA PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.053e-58
Identity = 114/205 (55.61%), Postives = 147/205 (71.71%), Query Frame = 1
Query:  217 KADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQN---------VICVYVAIG 804
            +A E++ ++  R+  +    ++  IG V+ VGDGIAR+YGL+E+ AGE+VEF  G  GIALNLE+ NVG+V+ G    I+EG  VK TG I  +P  +A LGRV++AL  PIDGRG +S  E R +E  APGII R+SV+EP+QTGL A+DS++PIGRGQRELIIGDRQTGKTA+A DTILNQ+  N         + CVYVAIG
Sbjct:    6 RAAELTTLLESRMTNFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIG 210          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPAM_NICPL (ATP synthase subunit alpha, mitochondrial OS=Nicotiana plumbaginifolia GN=ATPA PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.053e-58
Identity = 113/205 (55.12%), Postives = 147/205 (71.71%), Query Frame = 1
Query:  217 KADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ---------QGQNVICVYVAIG 804
            +A E+++++  RI  +    ++  IG V+ VGDGIAR+YGL+E+ AGE+VEF  G  GIALNLE+ NVG+V+ G    I+EG  VK TG I  +P  +A LGRV++ L  PIDGRG +S  E R +E  APGII R+SV+EP+QTGL A+DS++PIGRGQRELIIGDRQTGKTA+A DTILNQ         + + + CVYVAIG
Sbjct:    6 RAAELTSLLESRISNFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDGLGVPIDGRGALSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRATSESETLYCVYVAIG 210          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_RHOS5 (ATP synthase subunit alpha OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=atpA PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.375e-58
Identity = 114/207 (55.07%), Postives = 150/207 (72.46%), Query Frame = 1
Query:  214 IKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQN----------VICVYVAIG 804
            I+A EIS I++E+I+ + +  ++  +G VL VGDGIAR++GLD V AGE+VEF  G  G+ALNLE  NVGVV+ GD   I+EG +VK T  I  +P  +A LGRV++ L  PIDG+G I+A+E R+ +  APGII R+ V+EP+ TGL ++D+MIPIGRGQRELIIGDRQTGKTA+A DTILNQ+  N          + C+YVAIG
Sbjct:    3 IQAAEISAILKEQIKNFGQAAEVAEVGRVLSVGDGIARVHGLDNVQAGEMVEFPGGIRGMALNLEVDNVGVVIFGDDRSIKEGDTVKRTKSIVDVPAGDALLGRVVDGLGNPIDGKGPIAATERRVADVKAPGIIPRKGVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGKTAIALDTILNQKSYNEAAGDDESKKLYCIYVAIG 209          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_RHIL3 (ATP synthase subunit alpha OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=atpA PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.375e-58
Identity = 113/205 (55.12%), Postives = 149/205 (72.68%), Query Frame = 1
Query:  214 IKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ--------QGQNVICVYVAIG 804
            I+A EIS I++++I+ + +E ++  +G VL VGDGIAR+YGLD V AGE+VEF  G  G+ALNLES NVGVV+ G    I+EG +VK TG I  +PV    LGRV++AL  PIDG+G I+A+    ++  APGII R+SV+EP+ TGL AID++IP+GRGQREL+IGDRQTGKTA+  D  LNQ        +G+ + CVYVAIG
Sbjct:    3 IRAAEISAILKDQIKNFGKEAEVSEVGQVLSVGDGIARVYGLDNVQAGEMVEFPGGIRGMALNLESDNVGVVIFGSDRDIKEGDTVKRTGAIVDVPVGPELLGRVVDALGNPIDGKGPINATRRSRVDIKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAILLDAFLNQKAIHDNGPEGEKLYCVYVAIG 207          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_HERA2 (ATP synthase subunit alpha OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=atpA PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.375e-58
Identity = 114/203 (56.16%), Postives = 156/203 (76.85%), Query Frame = 1
Query:  214 IKADEISNIIRERIEQ-YNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFE-----EGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            + A++I + ++  I+Q    +   VN+GTV  VGDG+ARI GL +VMA EL+EF+     E  +GIALNLE  NV  V++GD L I+EG  V++TGKI  +PV +  LGRV++ L +P+DG+G ISAS++R +E  APG+I R+SV +P+QTG++AID++IPIGRGQRELIIGDRQTGKTA+A DTI+NQ+GQ ++CVYVAIG
Sbjct:    3 VTAEDILSRLKASIQQPVGGDPTAVNVGTVASVGDGVARISGLRDVMASELLEFKQTKSGETVMGIALNLEKDNVAAVILGDYLEIEEGDLVRSTGKIISVPVGQELLGRVVDPLGRPLDGKGPISASKTREVERIAPGVIERKSVSQPVQTGILAIDALIPIGRGQRELIIGDRQTGKTAIAIDTIINQRGQGMVCVYVAIG 205          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_BRUSU (ATP synthase subunit alpha OS=Brucella suis GN=atpA PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.375e-58
Identity = 115/205 (56.10%), Postives = 147/205 (71.71%), Query Frame = 1
Query:  214 IKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQ--------GQNVICVYVAIG 804
            I+A EIS I++E+I+ + +E ++  +G VL VGDGIAR+YGLD V AGE+VEF  G  G+ALNLES NVGVV+ G    I+EG  VK TG I  +PV    LGRV++AL  PIDG+G I A E R ++  APGII R+SV+EP+ TGL AID++IP+GRGQREL+IGDRQTGKTA+  DT LNQ+           + CVYVA+G
Sbjct:    3 IRAAEISAILKEQIKNFGKEAEVSEVGQVLSVGDGIARVYGLDNVQAGEMVEFPGGIRGMALNLESDNVGVVIFGADRDIKEGDVVKRTGAIVDVPVGPELLGRVVDALGNPIDGKGPIKAKERRRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAIILDTFLNQKPIHDNGPDKDKLYCVYVAVG 207          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_BRUSI (ATP synthase subunit alpha OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=atpA PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.375e-58
Identity = 115/205 (56.10%), Postives = 147/205 (71.71%), Query Frame = 1
Query:  214 IKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQ--------GQNVICVYVAIG 804
            I+A EIS I++E+I+ + +E ++  +G VL VGDGIAR+YGLD V AGE+VEF  G  G+ALNLES NVGVV+ G    I+EG  VK TG I  +PV    LGRV++AL  PIDG+G I A E R ++  APGII R+SV+EP+ TGL AID++IP+GRGQREL+IGDRQTGKTA+  DT LNQ+           + CVYVA+G
Sbjct:    3 IRAAEISAILKEQIKNFGKEAEVSEVGQVLSVGDGIARVYGLDNVQAGEMVEFPGGIRGMALNLESDNVGVVIFGADRDIKEGDVVKRTGAIVDVPVGPELLGRVVDALGNPIDGKGPIKAKERRRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAIILDTFLNQKPIHDNGPDKDKLYCVYVAVG 207          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_BRUME (ATP synthase subunit alpha OS=Brucella melitensis GN=atpA PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.375e-58
Identity = 115/205 (56.10%), Postives = 147/205 (71.71%), Query Frame = 1
Query:  214 IKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQ--------GQNVICVYVAIG 804
            I+A EIS I++E+I+ + +E ++  +G VL VGDGIAR+YGLD V AGE+VEF  G  G+ALNLES NVGVV+ G    I+EG  VK TG I  +PV    LGRV++AL  PIDG+G I A E R ++  APGII R+SV+EP+ TGL AID++IP+GRGQREL+IGDRQTGKTA+  DT LNQ+           + CVYVA+G
Sbjct:    3 IRAAEISAILKEQIKNFGKEAEVSEVGQVLSVGDGIARVYGLDNVQAGEMVEFPGGIRGMALNLESDNVGVVIFGADRDIKEGDVVKRTGAIVDVPVGPELLGRVVDALGNPIDGKGPIKAKERRRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAIILDTFLNQKPIHDNGPDKDKLYCVYVAVG 207          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_BRUMB (ATP synthase subunit alpha OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=atpA PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.375e-58
Identity = 115/205 (56.10%), Postives = 147/205 (71.71%), Query Frame = 1
Query:  214 IKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQ--------GQNVICVYVAIG 804
            I+A EIS I++E+I+ + +E ++  +G VL VGDGIAR+YGLD V AGE+VEF  G  G+ALNLES NVGVV+ G    I+EG  VK TG I  +PV    LGRV++AL  PIDG+G I A E R ++  APGII R+SV+EP+ TGL AID++IP+GRGQREL+IGDRQTGKTA+  DT LNQ+           + CVYVA+G
Sbjct:    3 IRAAEISAILKEQIKNFGKEAEVSEVGQVLSVGDGIARVYGLDNVQAGEMVEFPGGIRGMALNLESDNVGVVIFGADRDIKEGDVVKRTGAIVDVPVGPELLGRVVDALGNPIDGKGPIKAKERRRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAIILDTFLNQKPIHDNGPDKDKLYCVYVAVG 207          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_BRUC2 (ATP synthase subunit alpha OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=atpA PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.375e-58
Identity = 115/205 (56.10%), Postives = 147/205 (71.71%), Query Frame = 1
Query:  214 IKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQ--------GQNVICVYVAIG 804
            I+A EIS I++E+I+ + +E ++  +G VL VGDGIAR+YGLD V AGE+VEF  G  G+ALNLES NVGVV+ G    I+EG  VK TG I  +PV    LGRV++AL  PIDG+G I A E R ++  APGII R+SV+EP+ TGL AID++IP+GRGQREL+IGDRQTGKTA+  DT LNQ+           + CVYVA+G
Sbjct:    3 IRAAEISAILKEQIKNFGKEAEVSEVGQVLSVGDGIARVYGLDNVQAGEMVEFPGGIRGMALNLESDNVGVVIFGADRDIKEGDVVKRTGAIVDVPVGPELLGRVVDALGNPIDGKGPIKAKERRRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAIILDTFLNQKPIHDNGPDKDKLYCVYVAVG 207          
The following BLAST results are available for this feature:
BLAST of CX069529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPAM_PHAVU1.053e-5855.61ATP synthase subunit alpha, mitochondrial OS=Phase... [more]
ATPAM_NICPL1.053e-5855.12ATP synthase subunit alpha, mitochondrial OS=Nicot... [more]
ATPA_RHOS51.375e-5855.07ATP synthase subunit alpha OS=Rhodobacter sphaeroi... [more]
ATPA_RHIL31.375e-5855.12ATP synthase subunit alpha OS=Rhizobium leguminosa... [more]
ATPA_HERA21.375e-5856.16ATP synthase subunit alpha OS=Herpetosiphon aurant... [more]
ATPA_BRUSU1.375e-5856.10ATP synthase subunit alpha OS=Brucella suis GN=atp... [more]
ATPA_BRUSI1.375e-5856.10ATP synthase subunit alpha OS=Brucella suis (strai... [more]
ATPA_BRUME1.375e-5856.10ATP synthase subunit alpha OS=Brucella melitensis ... [more]
ATPA_BRUMB1.375e-5856.10ATP synthase subunit alpha OS=Brucella melitensis ... [more]
ATPA_BRUC21.375e-5856.10ATP synthase subunit alpha OS=Brucella canis (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_11A09_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11A09-B17-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069529 ID=CX069529; Name=CX069529; organism=Citrus sinensis; type=EST; length=804bp
GTCCGACAACGGGTTTTCCAACAAGCTTTACAAGGAGCGCTCGGAACTCT
GAATAGTTGTTTGAACAAGGAGTTACATTTACGTACCATTAGTGCCAATA
TTGGCATGTTTGGAGCGATGAAAGAAATAACTGATTAGTCCTTTTACTGT
AGGCACATTATTTTTTTTTTTTTTTTTAAGAAAAAAAAGAATTAAGAAAT
ACTTATGACAACAATTAAAGCCGACGAAATTAGTAATATTATCCGCGAAC
GTATTGAGCAATATAATAGAGAAGTAAAGATTGTAAATATTGGGACCGTA
CTTCAAGTAGGCGACGGCATCGCCCGTATTTATGGTCTTGATGAAGTAAT
GGCAGGTGAATTAGTAGAATTTGAAGAGGGTACAATAGGCATTGCTCTGA
ATTTGGAATCAACTAATGTTGGTGTTGTTTTAATGGGTGACGGTTTAATG
ATACAAGAAGGAAGTTCTGTAAAAGCAACCGGAAAAATTGCTCAGATACC
AGTAAGCGAGGCTTATTTAGGTCGTGTTATAAATGCCCTGGCTAAACCTA
TTGATGGTCGAGGTGAAATTTCAGCTTCTGAATCTCGATTAATTGAATCC
CCTGCTCCGGGTATTATTTCGAGACGTTCCGTATATGAGCCTCTTCAAAC
AGGACTTATTGCTATTGATTCGATGATCCCTATCGGACGCGGTCAGCGAG
AATTAATTATTGGGGACAGACAGACCGGTAAAACGGCAGTAGCCACGGAT
ACGATTCTCAACCAACAAGGGCAAAATGTAATATGTGTTTATGTAGCTAT
TGGT
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