CX069529

Overview
NameCX069529
Unique NameCX069529
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_BRUAB (ATP synthase subunit alpha OS=Brucella abortus GN=atpA PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.375e-58
Identity = 115/205 (56.10%), Postives = 147/205 (71.71%), Query Frame = 1
Query:  214 IKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQ--------GQNVICVYVAIG 804
            I+A EIS I++E+I+ + +E ++  +G VL VGDGIAR+YGLD V AGE+VEF  G  G+ALNLES NVGVV+ G    I+EG  VK TG I  +PV    LGRV++AL  PIDG+G I A E R ++  APGII R+SV+EP+ TGL AID++IP+GRGQREL+IGDRQTGKTA+  DT LNQ+           + CVYVA+G
Sbjct:    3 IRAAEISAILKEQIKNFGKEAEVSEVGQVLSVGDGIARVYGLDNVQAGEMVEFPGGIRGMALNLESDNVGVVIFGADRDIKEGDVVKRTGAIVDVPVGPELLGRVVDALGNPIDGKGPIKAKERRRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAIILDTFLNQKPIHDNGPDKDKLYCVYVAVG 207          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_BRUA2 (ATP synthase subunit alpha OS=Brucella abortus (strain 2308) GN=atpA PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.375e-58
Identity = 115/205 (56.10%), Postives = 147/205 (71.71%), Query Frame = 1
Query:  214 IKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQ--------GQNVICVYVAIG 804
            I+A EIS I++E+I+ + +E ++  +G VL VGDGIAR+YGLD V AGE+VEF  G  G+ALNLES NVGVV+ G    I+EG  VK TG I  +PV    LGRV++AL  PIDG+G I A E R ++  APGII R+SV+EP+ TGL AID++IP+GRGQREL+IGDRQTGKTA+  DT LNQ+           + CVYVA+G
Sbjct:    3 IRAAEISAILKEQIKNFGKEAEVSEVGQVLSVGDGIARVYGLDNVQAGEMVEFPGGIRGMALNLESDNVGVVIFGADRDIKEGDVVKRTGAIVDVPVGPELLGRVVDALGNPIDGKGPIKAKERRRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAIILDTFLNQKPIHDNGPDKDKLYCVYVAVG 207          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_BRUA1 (ATP synthase subunit alpha OS=Brucella abortus (strain S19) GN=atpA PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.375e-58
Identity = 115/205 (56.10%), Postives = 147/205 (71.71%), Query Frame = 1
Query:  214 IKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQ--------GQNVICVYVAIG 804
            I+A EIS I++E+I+ + +E ++  +G VL VGDGIAR+YGLD V AGE+VEF  G  G+ALNLES NVGVV+ G    I+EG  VK TG I  +PV    LGRV++AL  PIDG+G I A E R ++  APGII R+SV+EP+ TGL AID++IP+GRGQREL+IGDRQTGKTA+  DT LNQ+           + CVYVA+G
Sbjct:    3 IRAAEISAILKEQIKNFGKEAEVSEVGQVLSVGDGIARVYGLDNVQAGEMVEFPGGIRGMALNLESDNVGVVIFGADRDIKEGDVVKRTGAIVDVPVGPELLGRVVDALGNPIDGKGPIKAKERRRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAIILDTFLNQKPIHDNGPDKDKLYCVYVAVG 207          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA1_NITMU (ATP synthase subunit alpha 1 OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=atpA1 PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.375e-58
Identity = 111/197 (56.35%), Postives = 147/197 (74.62%), Query Frame = 1
Query:  214 IKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            +   EIS +I+ RIE      ++   GTV+ V DGI RI+GL +VM GE++EF   T G+ALNLE  +VG V++G+   I EG +VK TG+I ++PV E  +GRV+NAL +PIDG+G I+   S  IE  APG++ R+SV +P+QTGL AID+M+PIGRGQRELIIGDRQTGKTAVA D I+NQ+G+N+IC+YVAIG
Sbjct:    3 LNPSEISELIKSRIEGLEATAEVRTQGTVVSVTDGIVRIHGLSDVMQGEMLEFPGNTFGLALNLERDSVGAVVLGEYEHITEGDTVKCTGRILEVPVGEELIGRVVNALGQPIDGKGPITTKHSEPIEKIAPGVVWRQSVNQPVQTGLKAIDAMVPIGRGQRELIIGDRQTGKTAVAVDAIINQKGENMICIYVAIG 199          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_RHILW (ATP synthase subunit alpha OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=atpA PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.796e-58
Identity = 112/205 (54.63%), Postives = 149/205 (72.68%), Query Frame = 1
Query:  214 IKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ--------QGQNVICVYVAIG 804
            I+A EIS I++++I+ + +E ++  +G VL VGDGIAR+YGLD V AGE+VEF  G  G+ALNLES NVGVV+ G    I+EG +VK TG I  +PV    LGRV++AL  PIDG+G I+A+    ++  APGII R+SV+EP+ TGL AID++IP+GRGQREL+IGDRQTGKTA+  D  LNQ        +G+ + CVYVA+G
Sbjct:    3 IRAAEISAILKDQIKNFGKEAEVSEVGQVLSVGDGIARVYGLDNVQAGEMVEFPGGIRGMALNLESDNVGVVIFGSDRDIKEGDTVKRTGAIVDVPVGPELLGRVVDALGNPIDGKGPINATRRSRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAILLDAFLNQKAIHDNGPEGEKLYCVYVAVG 207          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_RHIEC (ATP synthase subunit alpha OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=atpA PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.796e-58
Identity = 112/205 (54.63%), Postives = 149/205 (72.68%), Query Frame = 1
Query:  214 IKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ--------QGQNVICVYVAIG 804
            I+A EIS I++++I+ + +E ++  +G VL VGDGIAR+YGLD V AGE+VEF  G  G+ALNLES NVGVV+ G    I+EG +VK TG I  +PV    LGRV++AL  PIDG+G I+A+    ++  APGII R+SV+EP+ TGL AID++IP+GRGQREL+IGDRQTGKTA+  D  LNQ        +G+ + CVYVA+G
Sbjct:    3 IRAAEISAILKDQIKNFGKEAEVSEVGQVLSVGDGIARVYGLDNVQAGEMVEFPGGIRGMALNLESDNVGVVIFGSDRDIKEGDTVKRTGAIVDVPVGPELLGRVVDALGNPIDGKGPINATRRSRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAILLDAFLNQKAIHDNGPEGEKLYCVYVAVG 207          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_RHIE6 (ATP synthase subunit alpha OS=Rhizobium etli (strain CIAT 652) GN=atpA PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.796e-58
Identity = 112/205 (54.63%), Postives = 149/205 (72.68%), Query Frame = 1
Query:  214 IKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ--------QGQNVICVYVAIG 804
            I+A EIS I++++I+ + +E ++  +G VL VGDGIAR+YGLD V AGE+VEF  G  G+ALNLES NVGVV+ G    I+EG +VK TG I  +PV    LGRV++AL  PIDG+G I+A+    ++  APGII R+SV+EP+ TGL AID++IP+GRGQREL+IGDRQTGKTA+  D  LNQ        +G+ + CVYVA+G
Sbjct:    3 IRAAEISAILKDQIKNFGKEAEVSEVGQVLSVGDGIARVYGLDNVQAGEMVEFPGGIRGMALNLESDNVGVVIFGSDRDIKEGDTVKRTGAIVDVPVGPELLGRVVDALGNPIDGKGPINATRRSRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAILLDAFLNQKAIHESGPEGEKLYCVYVAVG 207          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_RALSO (ATP synthase subunit alpha OS=Ralstonia solanacearum GN=atpA PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.796e-58
Identity = 112/197 (56.85%), Postives = 147/197 (74.62%), Query Frame = 1
Query:  214 IKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            +   EIS++I+ RIE         N GTV+ V DGI RI+GL  VM GE++EF   T G+ALNLE  +VG V++GD   I EG+ VK TG+I ++PV    LGRV+NAL +PIDG+G I+A ++ +IE  APG+I+R+SV +P+QTGL +ID+M+PIGRGQRELIIGDRQTGKTAVA D I+NQ+G+ + CVYVAIG
Sbjct:    3 LNPSEISDLIKTRIEGLKAGADAKNTGTVISVTDGICRIHGLSGVMQGEMLEFPGNTFGLALNLERDSVGAVVLGDYEHISEGNEVKCTGRILEVPVGPELLGRVVNALGQPIDGKGPINAKKTDVIEKVAPGVIARQSVSQPVQTGLKSIDAMVPIGRGQRELIIGDRQTGKTAVAVDAIINQKGKGIFCVYVAIG 199          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_LACBA (ATP synthase subunit alpha OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=atpA PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.796e-58
Identity = 104/198 (52.53%), Postives = 154/198 (77.78%), Query Frame = 1
Query:  211 TIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            +IKA+EIS +I++++E Y  E+ +   GTV  VGDG+AR +GL+  + GEL+ F+ G  G+  NLE+++VG+V++GD   I EG +VK TG+I ++PV +  +GRV+N L + IDG+G+IS  ++R IE  APG++ R+ V EPLQTG+ AID+++PIGRGQRELIIGDR+TGK+++A DTI+NQ+ Q++IC+YVAIG
Sbjct:    2 SIKAEEISALIKQQLESYQDEISVEETGTVTYVGDGVARAHGLNNALQGELLLFDNGVYGMVQNLEASDVGIVILGDFTGITEGDTVKRTGRIMEVPVGDQLIGRVVNPLGQAIDGKGDISTDKTRPIEHKAPGVMDRQGVSEPLQTGIKAIDALVPIGRGQRELIIGDRKTGKSSIAIDTIINQKDQDMICIYVAIG 199          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_HERAR (ATP synthase subunit alpha OS=Herminiimonas arsenicoxydans GN=atpA PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.796e-58
Identity = 110/197 (55.84%), Postives = 147/197 (74.62%), Query Frame = 1
Query:  214 IKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            +   EIS +I+ RI+      +I N GTV+ V DGI RI+GL +VM GE++EF   T G+ALNLE  +VG V++G+   I EG +VK TG+I ++P+     GRV+NAL +PIDG+G ++A  +  IE  APG+I+R+SV +P+QTG+ AID+M+PIGRGQRELIIGDRQTGKTAVA D I+NQ+GQNV C+YVAIG
Sbjct:    3 LNPSEISELIKSRIQGLGESAEIRNQGTVISVSDGICRIHGLSDVMQGEMLEFPGNTFGLALNLERDSVGAVILGEYEHISEGDTVKCTGRILEVPIGPELRGRVVNALGQPIDGKGPVNAKLTAPIEKIAPGVIARQSVDQPMQTGIKAIDAMVPIGRGQRELIIGDRQTGKTAVAIDAIINQKGQNVTCIYVAIG 199          
The following BLAST results are available for this feature:
BLAST of CX069529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPA_BRUAB1.375e-5856.10ATP synthase subunit alpha OS=Brucella abortus GN=... [more]
ATPA_BRUA21.375e-5856.10ATP synthase subunit alpha OS=Brucella abortus (st... [more]
ATPA_BRUA11.375e-5856.10ATP synthase subunit alpha OS=Brucella abortus (st... [more]
ATPA1_NITMU1.375e-5856.35ATP synthase subunit alpha 1 OS=Nitrosospira multi... [more]
ATPA_RHILW1.796e-5854.63ATP synthase subunit alpha OS=Rhizobium leguminosa... [more]
ATPA_RHIEC1.796e-5854.63ATP synthase subunit alpha OS=Rhizobium etli (stra... [more]
ATPA_RHIE61.796e-5854.63ATP synthase subunit alpha OS=Rhizobium etli (stra... [more]
ATPA_RALSO1.796e-5856.85ATP synthase subunit alpha OS=Ralstonia solanacear... [more]
ATPA_LACBA1.796e-5852.53ATP synthase subunit alpha OS=Lactobacillus brevis... [more]
ATPA_HERAR1.796e-5855.84ATP synthase subunit alpha OS=Herminiimonas arseni... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_11A09_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11A09-B17-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069529 ID=CX069529; Name=CX069529; organism=Citrus sinensis; type=EST; length=804bp
GTCCGACAACGGGTTTTCCAACAAGCTTTACAAGGAGCGCTCGGAACTCT
GAATAGTTGTTTGAACAAGGAGTTACATTTACGTACCATTAGTGCCAATA
TTGGCATGTTTGGAGCGATGAAAGAAATAACTGATTAGTCCTTTTACTGT
AGGCACATTATTTTTTTTTTTTTTTTTAAGAAAAAAAAGAATTAAGAAAT
ACTTATGACAACAATTAAAGCCGACGAAATTAGTAATATTATCCGCGAAC
GTATTGAGCAATATAATAGAGAAGTAAAGATTGTAAATATTGGGACCGTA
CTTCAAGTAGGCGACGGCATCGCCCGTATTTATGGTCTTGATGAAGTAAT
GGCAGGTGAATTAGTAGAATTTGAAGAGGGTACAATAGGCATTGCTCTGA
ATTTGGAATCAACTAATGTTGGTGTTGTTTTAATGGGTGACGGTTTAATG
ATACAAGAAGGAAGTTCTGTAAAAGCAACCGGAAAAATTGCTCAGATACC
AGTAAGCGAGGCTTATTTAGGTCGTGTTATAAATGCCCTGGCTAAACCTA
TTGATGGTCGAGGTGAAATTTCAGCTTCTGAATCTCGATTAATTGAATCC
CCTGCTCCGGGTATTATTTCGAGACGTTCCGTATATGAGCCTCTTCAAAC
AGGACTTATTGCTATTGATTCGATGATCCCTATCGGACGCGGTCAGCGAG
AATTAATTATTGGGGACAGACAGACCGGTAAAACGGCAGTAGCCACGGAT
ACGATTCTCAACCAACAAGGGCAAAATGTAATATGTGTTTATGTAGCTAT
TGGT
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