CX069529

Overview
NameCX069529
Unique NameCX069529
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_AZOSB (ATP synthase subunit alpha OS=Azoarcus sp. (strain BH72) GN=atpA PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.064e-58
Identity = 112/197 (56.85%), Postives = 148/197 (75.13%), Query Frame = 1
Query:  214 IKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            +   EIS++I+ RI+         N GTV+ V DGI RI+GL +VM GE++EF   T G+ALNLE  +VG V++G+   I EG +VKATG+I ++PV    +GRV+NAL +PIDG+G I+A  +  IE  APG+I+R+SV +P+QTGL ++DSM+PIGRGQRELIIGDRQTGKTAVA D I+NQ+GQN+ CVYVAIG
Sbjct:    3 LNPSEISDLIKSRIQNLQLAATSRNEGTVVSVTDGITRIHGLTDVMQGEMLEFPGNTFGLALNLERDSVGAVVLGEYEHITEGDTVKATGRILEVPVGPELIGRVVNALGQPIDGKGPINAKLTDKIEKVAPGVIARQSVSQPVQTGLKSVDSMVPIGRGQRELIIGDRQTGKTAVAVDAIINQKGQNMFCVYVAIG 199          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_METPP (ATP synthase subunit alpha OS=Methylibium petroleiphilum (strain PM1) GN=atpA PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.002e-58
Identity = 114/198 (57.58%), Postives = 149/198 (75.25%), Query Frame = 1
Query:  226 EISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFE-----EGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            EIS +I+ RIE       I N GTV+ V DGI R++GL EVMAGE++EF      + T G+ALNLE  +VG V++G+   I EG +VK TG+I ++PV    +GRV+NAL +PIDG+G I+A  + +IE  APG+I+R+SV +P+QTGL +IDSM+P+GRGQRELIIGDRQTGKTAVA D I+NQ+GQN+ CVYVAIG
Sbjct:    7 EISELIKSRIEGLGASSDIRNQGTVVSVTDGIVRVHGLSEVMAGEMLEFPATKDGQPTFGLALNLERDSVGAVILGEYEHISEGDTVKCTGRILEVPVGPELIGRVVNALGQPIDGKGPINAKMTDVIEKVAPGVIARKSVDQPVQTGLKSIDSMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKGQNMTCVYVAIG 204          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_HYDS0 (ATP synthase subunit alpha OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=atpA PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.002e-58
Identity = 108/198 (54.55%), Postives = 144/198 (72.73%), Query Frame = 1
Query:  211 TIKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            T+  D+   I++ +++ +  ++K+  +G V  VGDG+AR YGLD VMA EL+EF+ G  G+A NLE  NVG++++G    I+EGS VK TG+I   PV E  +GRVI+ L  P+DG+G I+A     +E  APGI+ R+SV+EPLQTG+ AID+MIPIGRGQRELIIGDR TGKT VA DTILNQ+  +V C+YVAIG
Sbjct:    2 TLAYDDALEILKSQLQSFETDIKMEEVGVVYAVGDGVARAYGLDNVMANELLEFDSGEAGLAFNLEEDNVGIIILGSESGIKEGSIVKRTGRILDAPVGEELVGRVIDPLGNPLDGKGPINAKHRSPVEKIAPGIVKRKSVHEPLQTGIKAIDAMIPIGRGQRELIIGDRATGKTTVAIDTILNQKDTDVYCIYVAIG 199          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_FERNB (ATP synthase subunit alpha OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=atpA PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.002e-58
Identity = 109/194 (56.19%), Postives = 145/194 (74.74%), Query Frame = 1
Query:  226 EISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEF-EEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            EI  ++  +I  Y  E+++ + G V+QVGDGIAR+YGL+ VMA E+VEF E GT G+A NLE  NVG++++GD   I+EG +V+   +I ++PV E  LGRV+N L +P+DG G +   E+R IE  APG+I R+ V  PLQTGL  +DS+IPIGRGQRELIIGDRQTGKTA+A DTI+NQ+G+ V C+YVAIG
Sbjct:    7 EIVRVLETKISDYKEEIRLEDTGKVIQVGDGIARVYGLNNVMANEMVEFVETGTKGLAFNLEEDNVGIIILGDYKDIKEGHTVRRLNRIMEVPVGEGLLGRVVNPLGEPLDGLGPVEYKETRPIEFKAPGVIFRKPVDTPLQTGLKVVDSLIPIGRGQRELIIGDRQTGKTAIAIDTIINQKGKGVYCIYVAIG 200          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_THESQ (ATP synthase subunit alpha OS=Thermotoga sp. (strain RQ2) GN=atpA PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.227e-58
Identity = 111/198 (56.06%), Postives = 148/198 (74.75%), Query Frame = 1
Query:  214 IKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEF-EEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            I   EI+ ++ E+I+ +  ++ + + G V+QVGDGIAR YGL++VM  ELVEF E G  G+A NLE  NVG++++G+   I+EG +V+   +I ++PV E  LGRV+N L +P+DG+G I+A   R IE  APG+I R+ V  PLQTG+ AIDSMIPIGRGQRELIIGDRQTGKTA+A DTI+NQ+GQ V C+YVAIG
Sbjct:    3 INPGEITKVLEEKIKSFEEKIDLEDTGKVIQVGDGIARAYGLNKVMVSELVEFVETGVKGVAFNLEEDNVGIIILGEYKDIKEGHTVRRLKRIIEVPVGEELLGRVVNPLGEPLDGKGPINAKNFRPIEIKAPGVIYRKPVDTPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTAIAIDTIINQKGQGVYCIYVAIG 200          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_THEP1 (ATP synthase subunit alpha OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=atpA PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.227e-58
Identity = 111/198 (56.06%), Postives = 148/198 (74.75%), Query Frame = 1
Query:  214 IKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEF-EEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            I   EI+ ++ E+I+ +  ++ + + G V+QVGDGIAR YGL++VM  ELVEF E G  G+A NLE  NVG++++G+   I+EG +V+   +I ++PV E  LGRV+N L +P+DG+G I+A   R IE  APG+I R+ V  PLQTG+ AIDSMIPIGRGQRELIIGDRQTGKTA+A DTI+NQ+GQ V C+YVAIG
Sbjct:    3 INPGEITKVLEEKIKSFEEKIDLEDTGKVIQVGDGIARAYGLNKVMVSELVEFVETGVKGVAFNLEEDNVGIIILGEYKDIKEGHTVRRLKRIIEVPVGEELLGRVVNPLGEPLDGKGPINAKNFRPIEIKAPGVIYRKPVDTPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTAIAIDTIINQKGQGVYCIYVAIG 200          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_THEMA (ATP synthase subunit alpha OS=Thermotoga maritima GN=atpA PE=1 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.227e-58
Identity = 111/198 (56.06%), Postives = 148/198 (74.75%), Query Frame = 1
Query:  214 IKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEF-EEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            I   EI+ ++ E+I+ +  ++ + + G V+QVGDGIAR YGL++VM  ELVEF E G  G+A NLE  NVG++++G+   I+EG +V+   +I ++PV E  LGRV+N L +P+DG+G I+A   R IE  APG+I R+ V  PLQTG+ AIDSMIPIGRGQRELIIGDRQTGKTA+A DTI+NQ+GQ V C+YVAIG
Sbjct:    3 INPGEITKVLEEKIKSFEEKIDLEDTGKVIQVGDGIARAYGLNKVMVSELVEFVETGVKGVAFNLEEDNVGIIILGEYKDIKEGHTVRRLKRIIEVPVGEELLGRVVNPLGEPLDGKGPINAKNFRPIEIKAPGVIYRKPVDTPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTAIAIDTIINQKGQGVYCIYVAIG 200          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_METSB (ATP synthase subunit alpha OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=atpA PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.227e-58
Identity = 116/205 (56.59%), Postives = 142/205 (69.27%), Query Frame = 1
Query:  214 IKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQN--------VICVYVAIG 804
            I+A EIS I++  I  +  E  +  +G VL VGDGIAR+YGLD V AGE+VEFE G  G+ALNLE  NVGVV+ G    I+EG +VK TG I  +PV    LGRV++AL  PIDG+G I       ++  APGII R+SV+EP+ TGL AID++IPIGRGQRELIIGDRQTGKTAVA D ILNQ+  N        + CVYVA+G
Sbjct:    3 IRAAEISQILKNEIANFGNEASVTEVGQVLSVGDGIARVYGLDNVEAGEMVEFENGVRGMALNLEVDNVGVVIFGSDRDIKEGQTVKRTGAIVDVPVGRGLLGRVVDALGNPIDGKGPIPYETRSRVDVKAPGIIPRKSVHEPMATGLKAIDALIPIGRGQRELIIGDRQTGKTAVALDAILNQKSANQGTDESAKLYCVYVAVG 207          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_LEPCP (ATP synthase subunit alpha OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=atpA PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.227e-58
Identity = 110/193 (56.99%), Postives = 146/193 (75.65%), Query Frame = 1
Query:  226 EISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            EIS +I+ RIE       + N GTV+ V DGI R++GL + MAGE++EF     G+ALNLE  +VG V++G+   I EG +V+ TG+I ++PV    +GRV+NAL +PIDG+G I+A  + +IE  APG+I+R+SV +P+QTGL +IDSM+PIGRGQRELIIGDRQTGKTAVA D I+NQ+GQN+ CVYVAIG
Sbjct:    7 EISELIKSRIEGLGAATDVRNQGTVVSVTDGIVRVHGLSDAMAGEMLEFPGNVFGLALNLERDSVGAVILGEYEGISEGDTVRCTGRILEVPVGPELIGRVVNALGQPIDGKGPINAKMTDVIEKVAPGVIARKSVDQPVQTGLKSIDSMVPIGRGQRELIIGDRQTGKTAVAIDAIINQKGQNMTCVYVAIG 199          
BLAST of CX069529 vs. ExPASy Swiss-Prot
Match: ATPA_ALHEH (ATP synthase subunit alpha OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=atpA PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.227e-58
Identity = 108/197 (54.82%), Postives = 145/197 (73.60%), Query Frame = 1
Query:  214 IKADEISNIIRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESTNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIG 804
            +   EIS +I+ RIE +    +  N GT++ VGDGI RI+GL + M GE++EF   T G+ALNLE  +VG V++GD   + EG +VK TG+I ++PV E+ LGRV++AL  P+D +GEI A  S  +E  APG+ISR+SV +P+QTGL A+D+M+PIGRGQRELIIGDRQTGKTAVA D I+NQ+   + C+YVAIG
Sbjct:    3 LNPSEISELIKRRIENFEAVAEARNQGTIVSVGDGICRIHGLADAMQGEMLEFPNDTFGMALNLERDSVGAVILGDYEHLSEGDTVKCTGRILEVPVGESLLGRVVDALGNPVDAKGEIKAEGSSPVEKVAPGVISRQSVDQPVQTGLKAVDAMVPIGRGQRELIIGDRQTGKTAVAIDAIINQKNSGIKCIYVAIG 199          
The following BLAST results are available for this feature:
BLAST of CX069529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPA_AZOSB3.064e-5856.85ATP synthase subunit alpha OS=Azoarcus sp. (strain... [more]
ATPA_METPP4.002e-5857.58ATP synthase subunit alpha OS=Methylibium petrolei... [more]
ATPA_HYDS04.002e-5854.55ATP synthase subunit alpha OS=Hydrogenobaculum sp.... [more]
ATPA_FERNB4.002e-5856.19ATP synthase subunit alpha OS=Fervidobacterium nod... [more]
ATPA_THESQ5.227e-5856.06ATP synthase subunit alpha OS=Thermotoga sp. (stra... [more]
ATPA_THEP15.227e-5856.06ATP synthase subunit alpha OS=Thermotoga petrophil... [more]
ATPA_THEMA5.227e-5856.06ATP synthase subunit alpha OS=Thermotoga maritima ... [more]
ATPA_METSB5.227e-5856.59ATP synthase subunit alpha OS=Methylocella silvest... [more]
ATPA_LEPCP5.227e-5856.99ATP synthase subunit alpha OS=Leptothrix cholodnii... [more]
ATPA_ALHEH5.227e-5854.82ATP synthase subunit alpha OS=Alkalilimnicola ehrl... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_11A09_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11A09-B17-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069529 ID=CX069529; Name=CX069529; organism=Citrus sinensis; type=EST; length=804bp
GTCCGACAACGGGTTTTCCAACAAGCTTTACAAGGAGCGCTCGGAACTCT
GAATAGTTGTTTGAACAAGGAGTTACATTTACGTACCATTAGTGCCAATA
TTGGCATGTTTGGAGCGATGAAAGAAATAACTGATTAGTCCTTTTACTGT
AGGCACATTATTTTTTTTTTTTTTTTTAAGAAAAAAAAGAATTAAGAAAT
ACTTATGACAACAATTAAAGCCGACGAAATTAGTAATATTATCCGCGAAC
GTATTGAGCAATATAATAGAGAAGTAAAGATTGTAAATATTGGGACCGTA
CTTCAAGTAGGCGACGGCATCGCCCGTATTTATGGTCTTGATGAAGTAAT
GGCAGGTGAATTAGTAGAATTTGAAGAGGGTACAATAGGCATTGCTCTGA
ATTTGGAATCAACTAATGTTGGTGTTGTTTTAATGGGTGACGGTTTAATG
ATACAAGAAGGAAGTTCTGTAAAAGCAACCGGAAAAATTGCTCAGATACC
AGTAAGCGAGGCTTATTTAGGTCGTGTTATAAATGCCCTGGCTAAACCTA
TTGATGGTCGAGGTGAAATTTCAGCTTCTGAATCTCGATTAATTGAATCC
CCTGCTCCGGGTATTATTTCGAGACGTTCCGTATATGAGCCTCTTCAAAC
AGGACTTATTGCTATTGATTCGATGATCCCTATCGGACGCGGTCAGCGAG
AATTAATTATTGGGGACAGACAGACCGGTAAAACGGCAGTAGCCACGGAT
ACGATTCTCAACCAACAAGGGCAAAATGTAATATGTGTTTATGTAGCTAT
TGGT
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