CX069526
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069526 vs. ExPASy Swiss-Prot
Match: SODC_SCHMA (Superoxide dismutase [Cu-Zn] OS=Schistosoma mansoni GN=SOD PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 8.129e-39 Identity = 87/181 (48.07%), Postives = 99/181 (54.70%), Query Frame = -2 Query: 203 VKAVAVLGGTEGVKGTVSFAQEGDGILFSN*LVDSETSCS*IMSKVIXXXXXXXXXXPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 745 +KAV V+ GT GVKG V F QE D P V SGLK G HGFHVH GDTTNGC S G HFNP +EHGAPED RH G A + D I L+G +SIIGR +V+H + DDLG+GGHELSK TGNAGGR+ACG+IGL Sbjct: 1 MKAVCVMTGTAGVKGVVKFTQETDN-------------------------------GPVHVHAEFSGLKAGKHGFHVHEFGDTTNGCTSAGAHFNPTKQEHGAPEDSIRHVGDLGNVVAGADGNAVYNATDKLISLNGSHSIIGRTMVIHENEDDLGRGGHELSKVTGNAGGRLACGVIGL 150
BLAST of CX069526 vs. ExPASy Swiss-Prot
Match: SODC_DROPS (Superoxide dismutase [Cu-Zn] OS=Drosophila pseudoobscura pseudoobscura GN=Sod PE=3 SV=3) HSP 1 Score: 160.614 bits (405), Expect = 1.062e-38 Identity = 88/182 (48.35%), Postives = 102/182 (56.04%), Query Frame = -2 Query: 203 MVKAVAVLGGTEGVKGTVSFAQEGDGILFSN*LVDSETSCS*IMSKVIXXXXXXXXXXPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 748 MVKAV V+ G KGTV F QE SE V+G + GL G HGFHVH GD TNGCMS+GPHFNP KEHGAP D+NRH ++ D++I L G +SIIGR VVVHAD DDLGKGGHELSK+TGNAG R+ CG+IG+ Sbjct: 1 MVKAVCVINGD--AKGTVFFEQE-----------TSEAPVK--------------------VTGEVLGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPRNKEHGAPTDENRHLGDLGNIQAAGDSPTAVSITDSKITLFGADSIIGRTVVVHADADDLGKGGHELSKTTGNAGARIGCGVIGI 149
BLAST of CX069526 vs. ExPASy Swiss-Prot
Match: SODC_ASPJA (Superoxide dismutase [Cu-Zn] (Fragment) OS=Aspergillus japonicus GN=sodC PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.811e-38 Identity = 76/111 (68.47%), Postives = 85/111 (76.58%), Query Frame = -2 Query: 197 HGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGLQG 529 HGFHVHALGDTTNGCMSTGPHFNP GKEHGAP+D+NRHA G A V D+QIPL+G +SIIGRAVVVHADPDDLGKGGHELSK+TGN+ + G+QG Sbjct: 8 HGFHVHALGDTTNGCMSTGPHFNPTGKEHGAPQDENRHAGDLGNITAGADGVANVNVSDSQIPLTGAHSIIGRAVVVHADPDDLGKGGHELSKTTGNSNSSMDSCAHGIQG 118
BLAST of CX069526 vs. ExPASy Swiss-Prot
Match: SODC_PRIGL (Superoxide dismutase [Cu-Zn] OS=Prionace glauca GN=sod1 PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 8.988e-38 Identity = 85/181 (46.96%), Postives = 99/181 (54.70%), Query Frame = -2 Query: 203 VKAVAVLGGTEGVKGTVSFAQEGDGILFSN*LVDSETSCS*IMSKVIXXXXXXXXXXPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 745 +KAV VL GT V GTV F Q DG P T+ GS++GL PG HGFHVHA GD TNGC+S GPH+NP K HG P+D+ RH G A F + D Q+ LSG SIIGR +VVH DDLGKGG E S TGNAG R+ACG+IG+ Sbjct: 1 MKAVCVLKGTGEVTGTVLFEQAADG--------------------------------PVTLKGSITGLTPGKHGFHVHAFGDNTNGCISAGPHYNPFSKNHGGPDDEERHVGDLGNVEANGNGVAEFEIKDRQLHLSGERSIIGRTLVVHEKEDDLGKGGDEESLRTGNAGSRLACGVIGI 149
BLAST of CX069526 vs. ExPASy Swiss-Prot
Match: SODC_HALRO (Superoxide dismutase [Cu-Zn] OS=Halocynthia roretzi PE=1 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 8.988e-38 Identity = 88/181 (48.62%), Postives = 107/181 (59.12%), Query Frame = -2 Query: 203 VKAVAVLGGTEGVKGTVSFAQEGDGILFSN*LVDSETSCS*IMSKVIXXXXXXXXXXPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 745 +KAV VL G+ VKGT++F Q+ G SC TV+G +SGL PG HGFH+H GD TNGC S+G HFNP + HGAPEDD RH G AT + D I L+G +SIIGRAVVVHA DDLGKGGHE SK+TG+AGGR++CG+IG+ Sbjct: 3 IKAVCVLVGS--VKGTLNFKQDAIG------------SC--------------------TVTGEVSGLIPGKHGFHIHEYGDLTNGCTSSGGHFNPFKQIHGAPEDDIRHVGDLGNITADSSGVATVNITDRMISLTGEHSIIGRAVVVHAGEDDLGKGGHEDSKTTGHAGGRLSCGVIGI 149
BLAST of CX069526 vs. ExPASy Swiss-Prot
Match: SODC_CERCA (Superoxide dismutase [Cu-Zn] OS=Ceratitis capitata GN=Sod PE=3 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 4.461e-37 Identity = 85/182 (46.70%), Postives = 101/182 (55.49%), Query Frame = -2 Query: 203 MVKAVAVLGGTEGVKGTVSFAQEGDGILFSN*LVDSETSCS*IMSKVIXXXXXXXXXXPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 748 +VKAV V+ G VKGTV F Q+ D+++ V+G ++GL G HGFHVH GD TNGC S GPHFNP G HGAP D NRH G + D I L G NSI+GR +VVHADPDDLGKGGHELSK+TGNAG R+ CG+IG+ Sbjct: 2 VVKAVCVINGD--VKGTVHFEQQ-----------DAKSP--------------------VLVTGEVNGLAKGLHGFHVHEFGDNTNGCTSAGPHFNPYGNSHGAPSDLNRHLGDLGNIEASGDGATKVEISDKLITLFGENSIVGRTIVVHADPDDLGKGGHELSKTTGNAGARLGCGVIGI 150
BLAST of CX069526 vs. ExPASy Swiss-Prot
Match: SODC2_XENLA (Superoxide dismutase [Cu-Zn] B OS=Xenopus laevis GN=sod1-B PE=1 SV=3) HSP 1 Score: 152.14 bits (383), Expect = 3.776e-36 Identity = 82/181 (45.30%), Postives = 96/181 (53.04%), Query Frame = -2 Query: 206 MVKAVAVLGGTEGVKGTVSFAQEGDGILFSN*LVDSETSCS*IMSKVIXXXXXXXXXXPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIG 748 MVKAV VL G+ VKG V F Q+ +G + +V G + GL G HGFH+H GD TNGCMS G HFNP K HGAP D +RH A F + D+ I L GPNSIIGR VVH DDLGKGG++ S TGNAGGR+ACG+IG Sbjct: 1 MVKAVCVLAGSGDVKGVVHFEQQDEGAV--------------------------------SVEGKIEGLTDGLHGFHIHVFGDNTNGCMSAGSHFNPENKNHGAPGDTDRHVGDLGNVTAEGG-VAQFKITDSLISLKGPNSIIGRTAVVHEKADDLGKGGNDESLKTGNAGGRLACGVIG 148
BLAST of CX069526 vs. ExPASy Swiss-Prot
Match: SODC_DANRE (Superoxide dismutase [Cu-Zn] OS=Danio rerio GN=sod1 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 8.413e-36 Identity = 83/180 (46.11%), Postives = 97/180 (53.89%), Query Frame = -2 Query: 203 KAVAVLGGTEGVKGTVSFAQEGDGILFSN*LVDSETSCS*IMSKVIXXXXXXXXXXPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 742 KAV VL GT V GTV F QEG+ P V+G ++GL PG HGFHVHA GD TNGC+S GPHFNP K HG P D RH G A + D + LSG +SIIGR +V+H DDLGKGG+E S TGNAGGR+ACG+IG+ Sbjct: 4 KAVCVLKGTGEVTGTVYFNQEGE-------------------------------KKPVKVTGEITGLTPGKHGFHVHAFGDNTNGCISAGPHFNPHDKTHGGPTDSVRHVGDLGNVTADASGVAKIEIEDAMLTLSGQHSIIGRTMVIHEKEDDLGKGGNEESLKTGNAGGRLACGVIGI 152
BLAST of CX069526 vs. ExPASy Swiss-Prot
Match: SODC_BOMMO (Superoxide dismutase [Cu-Zn] OS=Bombyx mori PE=1 SV=3) HSP 1 Score: 150.599 bits (379), Expect = 1.099e-35 Identity = 72/122 (59.02%), Postives = 82/122 (67.21%), Query Frame = -2 Query: 203 VSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXGTAT-FTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 565 VSG + GL G HGFHVH GD TNGC S G HFNP ++HG P RH T ++ D+QI L GPNSIIGR +VVHADPDDLG GGHELSK+TGNAGGR+ACG+IGL Sbjct: 30 VSGEVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGHELSKTTGNAGGRIACGVIGL 151
BLAST of CX069526 vs. ExPASy Swiss-Prot
Match: SODC1_XENLA (Superoxide dismutase [Cu-Zn] A OS=Xenopus laevis GN=sod1-A PE=1 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 1.099e-35 Identity = 83/181 (45.86%), Postives = 94/181 (51.93%), Query Frame = -2 Query: 206 MVKAVAVLGGTEGVKGTVSFAQEGDGILFSN*LVDSETSCS*IMSKVIXXXXXXXXXXPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIG 748 MVKAV VL G+ VKG V F Q+ DG TV G + GL G HGFH+H GD TNGC+S GPHFNP K HG+P+D +RH G A F D QI L G SIIGR VVH DDLGKGG + S TGNAGGR+ACG+IG Sbjct: 1 MVKAVCVLAGSGDVKGVVRFEQQDDG--------------------------------DVTVEGKIEGLTDGNHGFHIHVFGDNTNGCLSAGPHFNPQNKNHGSPKDADRHV-GDLGNVTAEGGVAQFKFTDPQISLKGERSIIGRTAVVHEKQDDLGKGGDDESLKTGNAGGRLACGVIG 148 The following BLAST results are available for this feature:
BLAST of CX069526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069526 ID=CX069526; Name=CX069526; organism=Citrus sinensis; type=EST; length=878bpback to top |