CX069526
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069526 vs. ExPASy Swiss-Prot
Match: SODC_MACFA (Superoxide dismutase [Cu-Zn] OS=Macaca fascicularis GN=SOD1 PE=2 SV=3) HSP 1 Score: 144.821 bits (364), Expect = 6.029e-34 Identity = 81/182 (44.51%), Postives = 100/182 (54.95%), Query Frame = -2 Query: 203 VKAVAVLGGTEGVKGTVSFAQ-EGDGILFSN*LVDSETSCS*IMSKVIXXXXXXXXXXPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 745 +KAV VL G V+GT++F Q E +G P V GS++GL G HGFHVH GD T GC S GPHFNP ++HG P+D+ RH G A + D+ I LSG +SIIGR +VVH DDLGKGG+E SK TGNAGGR+ACG+IG+ Sbjct: 3 MKAVCVLKGDSPVQGTINFEQKESNG--------------------------------PVKVWGSITGLTEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRQHGGPKDEERHVGDLGNVTAGKDGVAKVSFEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESKKTGNAGGRLACGVIGI 152
BLAST of CX069526 vs. ExPASy Swiss-Prot
Match: SODC_CAPHI (Superoxide dismutase [Cu-Zn] OS=Capra hircus GN=SOD1 PE=2 SV=3) HSP 1 Score: 144.821 bits (364), Expect = 6.029e-34 Identity = 78/180 (43.33%), Postives = 96/180 (53.33%), Query Frame = -2 Query: 203 KAVAVLGGTEGVKGTVSFAQEGDGILFSN*LVDSETSCS*IMSKVIXXXXXXXXXXPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 742 KAV VL G V+GT+ F +GD ++ V+GS++GL G HGFHVH GD T GC S GPHFNP K+HG P+D+ RH G A +VD I LSG SIIGR +VVH PDDLG+GG+E S TGNAG +ACG+IG+ Sbjct: 4 KAVCVLKGDGPVQGTIHFEAKGDKVV---------------------------------VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVKADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGSCLACGVIGI 150
BLAST of CX069526 vs. ExPASy Swiss-Prot
Match: SODC_CEREL (Superoxide dismutase [Cu-Zn] OS=Cervus elaphus GN=SOD1 PE=2 SV=3) HSP 1 Score: 144.436 bits (363), Expect = 7.874e-34 Identity = 77/180 (42.78%), Postives = 97/180 (53.89%), Query Frame = -2 Query: 203 KAVAVLGGTEGVKGTVSFAQEGDGILFSN*LVDSETSCS*IMSKVIXXXXXXXXXXPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 742 KAV VL G V+GT+ F +G ++ V+GS++GL G HGFHVH GD T GC S GPHFNP K+HG P+D+ RH G A +VD+ I LSG +SIIGR +VVH PDDLG+GG+E S TGNA R+ACG+IG+ Sbjct: 4 KAVCVLKGDGPVQGTIRFEAKGHTVV---------------------------------VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAKVDIVDSLISLSGEHSIIGRTMVVHEKPDDLGRGGNEESTKTGNARNRLACGVIGI 150
BLAST of CX069526 vs. ExPASy Swiss-Prot
Match: SODC_PIG (Superoxide dismutase [Cu-Zn] OS=Sus scrofa GN=SOD1 PE=1 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 1.028e-33 Identity = 77/180 (42.78%), Postives = 96/180 (53.33%), Query Frame = -2 Query: 203 KAVAVLGGTEGVKGTVSFAQEGDGILFSN*LVDSETSCS*IMSKVIXXXXXXXXXXPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 742 KAV VL G V+GT+ F +G+ + V+G++ GL G HGFHVH GD T GC S GPHFNP K+HG P+D RH G AT + D+ I LSG +SIIGR +VVH PDDLG+GG+E S TGNAG R+ACG+IG+ Sbjct: 4 KAVCVLKGDGPVQGTIYFELKGEKTVL--------------------------------VTGTIKGLAEGDHGFHVHQFGDNTQGCTSAGPHFNPESKKHGGPKDQERHVGDLGNVTAGKDGVATVYIEDSVIALSGDHSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGSRLACGVIGI 151
BLAST of CX069526 vs. ExPASy Swiss-Prot
Match: SODC_CANAL (Superoxide dismutase [Cu-Zn] OS=Candida albicans GN=SOD1 PE=3 SV=3) HSP 1 Score: 144.05 bits (362), Expect = 1.028e-33 Identity = 84/183 (45.90%), Postives = 97/183 (53.01%), Query Frame = -2 Query: 203 MVKAVAVLGGTEGVKGTVSFAQEGDGILFSN*LVDSETSCS*IMSKVIXXXXXXXXXXPTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 748 MVKAVAV+ G V+GTV F QE + PTT+S + G P GFH+H GD TNGC S GPHFNP GK+HGAPEDD RH G A T D I L G +SI+GR +VVHA DD GKGG E SK+TG+AG R ACG+IGL Sbjct: 1 MVKAVAVVRGDSKVQGTVHFEQESESA-------------------------------PTTISWEIEGNDPNALRGFHIHQFGDNTNGCTSAGPHFNPFGKQHGAPEDDERHVGDLGNISTDGNGVAKGTKQDLLIKLIGKDSILGRTIVVHAGTDDYGKGGFEDSKTTGHAGARPACGVIGL 152
BLAST of CX069526 vs. ExPASy Swiss-Prot
Match: SODC_PAETN (Superoxide dismutase [Cu-Zn] OS=Paecilomyces tenuipes GN=SOD1 PE=3 SV=3) HSP 1 Score: 143.665 bits (361), Expect = 1.343e-33 Identity = 83/183 (45.36%), Postives = 98/183 (53.55%), Query Frame = -2 Query: 203 MVKAVAVLGGTEGVKGTVSFAQEGDGILFSN*LVDSETSCS*IMSKVIXXXXXXXXXXPTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 748 MVKAV VL G V GTV+F QE + PTT++ L+G P GFH+H GD TNGC S GPHFNP GK HGAP D RH G A ++ D+Q+ L GP+S+IGR VVVHA DDLGKGG+E S TGNAG R ACG+IG+ Sbjct: 1 MVKAVCVLRGDAKVGGTVTFEQESESA-------------------------------PTTITYDLTGNDPNAERGFHIHTFGDNTNGCTSAGPHFNPHGKTHGAPTDAARHVGDLGNVKTDAQGNAKGSIQDSQVKLIGPHSVIGRTVVVHAGTDDLGKGGNEESLKTGNAGPRPACGVIGV 152
BLAST of CX069526 vs. ExPASy Swiss-Prot
Match: SODC_CANGA (Superoxide dismutase [Cu-Zn] OS=Candida glabrata GN=SOD1 PE=3 SV=3) HSP 1 Score: 143.665 bits (361), Expect = 1.343e-33 Identity = 80/183 (43.72%), Postives = 99/183 (54.10%), Query Frame = -2 Query: 203 MVKAVAVLGGTEGVKGTVSFAQEGDGILFSN*LVDSETSCS*IMSKVIXXXXXXXXXXPTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 748 MVKAVAVL G+ GV G V+ Q + PTT++ ++G P GFH+H GD TNGC+S GPHFNP K HGAP+D+NRH G A + D+ + L GP S++GR+VVVHA DDLGKGG+E S TGNAG R ACG+IGL Sbjct: 1 MVKAVAVLRGSAGVSGVVTLEQASE-------------------------------QDPTTITYEIAGNDPNAERGFHIHEFGDVTNGCVSAGPHFNPFKKTHGAPQDENRHVGDLGNIKTDAQGVAKGVITDSLVKLIGPTSVVGRSVVVHAGTDDLGKGGNEESLKTGNAGPRPACGVIGL 152
BLAST of CX069526 vs. ExPASy Swiss-Prot
Match: SODC_MOUSE (Superoxide dismutase [Cu-Zn] OS=Mus musculus GN=Sod1 PE=1 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 1.754e-33 Identity = 78/181 (43.09%), Postives = 95/181 (52.49%), Query Frame = -2 Query: 203 VKAVAVLGGTEGVKGTVSFAQEGDGILFSN*LVDSETSCS*IMSKVIXXXXXXXXXXPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 745 +KAV VL G V+GT+ F Q+ G P +SG ++GL G HGFHVH GD T GC S GPHFNP K+HG P D+ RH G A ++ D I LSG +SIIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 3 MKAVCVLKGDGPVQGTIHFEQKASG-------------------------------EPVVLSGQITGLTEGQHGFHVHQYGDNTQGCTSAGPHFNPHSKKHGGPADEERHVGDLGNVTAGKDGVANVSIEDRVISLSGEHSIIGRTMVVHEKQDDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of CX069526 vs. ExPASy Swiss-Prot
Match: SODC5_DICDI (Superoxide dismutase [Cu-Zn] 5 OS=Dictyostelium discoideum GN=sodE PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.291e-33 Identity = 67/121 (55.37%), Postives = 79/121 (65.29%), Query Frame = -2 Query: 203 VSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 565 +SG +SGLK G HGFHVH GDTTNGC+S G HFNP KEHG+P D+NRH + + DN I L G NSIIGR++VVH DDLG+G + SK TGNAG R+ CGII L Sbjct: 29 ISGVISGLKEGKHGFHVHEFGDTTNGCLSAGAHFNPFKKEHGSPNDENRHVGDLGNIESNKDKKSIINITDNIITLFGQNSIIGRSIVVHDKEDDLGRGNSQDSKITGNAGSRLGCGIIAL 149
BLAST of CX069526 vs. ExPASy Swiss-Prot
Match: SODC_CRYGA (Superoxide dismutase [Cu-Zn] OS=Cryptococcus gattii GN=SOD1 PE=2 SV=3) HSP 1 Score: 142.51 bits (358), Expect = 2.992e-33 Identity = 81/183 (44.26%), Postives = 92/183 (50.27%), Query Frame = -2 Query: 203 MVKAVAVLGGTEGVKGTVSFAQEGDGILFSN*LVDSETSCS*IMSKVIXXXXXXXXXXPTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 748 MVKAVAVL G V G ++F QE +G P TVSG + L GFHVH GD TNGC S GPHFNP GK HGAP D RH G A+ + D + L GP SIIGR +VVHA DD GKGG+ S TGNAG R ACG+IG+ Sbjct: 1 MVKAVAVLKGDSPVTGVITFTQEKEGA-------------------------------PVTVSGDIKNLDANAERGFHVHEFGDNTNGCTSAGPHFNPHGKNHGAPSDSERHVGDLGNVKTDGNGVASVNISDKSLSLFGPYSIIGRTIVVHAGTDDFGKGGNAESLKTGNAGARAACGVIGI 152 The following BLAST results are available for this feature:
BLAST of CX069526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069526 ID=CX069526; Name=CX069526; organism=Citrus sinensis; type=EST; length=878bpback to top |