CX069514

Overview
NameCX069514
Unique NameCX069514
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7623 contig Csv1_Contig7623:203..1085. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C60_ARATH (Probable protein phosphatase 2C 60 OS=Arabidopsis thaliana GN=At4g31860 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.731e-21
Identity = 67/175 (38.29%), Postives = 94/175 (53.71%), Query Frame = -1
Query:  348 DAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLL---------KQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSA---------DNITCVVVRF 818
            ++GSTA  A++   +L VAN GDSR VI R   A  +SRDHKPD   E++RI  AGGF+  AG  RV G L +SRA GD            KQ V A P++    +    +FL+LA DG+WD +T+++ V  I    + E     + ++   R  A         DN+T ++VRF
Sbjct:  158 NSGSTACVAVVRDKQLFVANAGDSRCVISRKNQAYNLSRDHKPDLEAEKERILKAGGFI-HAG--RVNGSLNLSRAIGDMEFKQNKFLPSEKQIVTASPDVNTVELCDDDDFLVLACDGIWDCMTSQQLVDFIHEQLNSETKLSVVCEKVLDRCLAPNTSGGEGCDNMTMILVRF 329          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PPM1B_HUMAN (Protein phosphatase 1B OS=Homo sapiens GN=PPM1B PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.010e-20
Identity = 68/180 (37.78%), Postives = 94/180 (52.22%), Query Frame = -1
Query:  348 FLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKP----IQDPEEAAKRLMQEAYQRGSADNITCVVVRF 848
            F    N  +R +GSTA   ++    +   N GDSRAV+ R G     ++DHKP    E++RI++AGG VM     RV G LAVSRA GD   K         Q V  +PE+ E +     EF+ILA DG+WDV++NEE    +K       D E     ++     +GS DN++ V+V F
Sbjct:  120 FSDLRNGMDR-SGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVM---IQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCF 295          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PPMBL_MOUSE (Probable protein phosphatase 1B-like OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.319e-20
Identity = 65/171 (38.01%), Postives = 93/171 (54.39%), Query Frame = -1
Query:  348 DAGSTASTAILVGDRLL-VANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI----KPIQDPEEAAKRLMQEAYQRGSADNITCVVVRF 818
            D G + + A+LV  R L +A+ GDSRA++ R G+    + DH+P +  ER+RI DAGG V      RV G LAVSRA GD   K         Q V A+PE+         EF++LASDG+WD ++  +   ++    +   D E    +L+     +GS DN+TC+VV F
Sbjct:  152 DPGGSTAVALLVSPRFLYLAHCGDSRALLSRSGSVAFCTEDHRPHRPRERERIHDAGGTVR---RRRVEGSLAVSRALGDFAYKQAPGRPPELQLVSAEPEVAALARQDEDEFVLLASDGVWDALSGADLAGLVTSRLRLGLDLELLCAQLLDTCLCKGSLDNMTCMVVCF 319          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PP2C5_PARTE (Probable protein phosphatase 2C 5 OS=Paramecium tetraurelia GN=GSPATT00010582001 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.722e-20
Identity = 60/184 (32.61%), Postives = 105/184 (57.07%), Query Frame = -1
Query:  348 LKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI----KPIQDPEEAAKRLMQEAYQRGSA-----DNITCVVVRF 845
            ++  N++   AG TA+ A++VG  L VAN GDSR+ + R G    +S+DHKPD   E++RIE AGGFV      R  G L++SRA GD   K         Q + A P+++   + +S +FL++  DG+++   +++ +  +    K  Q+ ++A ++L+ +   + ++     DN+TC++V F
Sbjct:  114 IRGVNDETSLAGCTANVALIVGKTLYVANAGDSRSFLNRDGKPFDMSKDHKPDDDQEKKRIERAGGFV---SDGRANGNLSLSRALGDLEYKKDSRFKPEEQIISALPDVKVTQLTASDKFLLMGCDGVFETWDHQQILNFVNQELKSSQNLQKATEKLLDQLLAKDTSLGTGCDNMTCILVLF 294          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C11_ORYSJ (Probable protein phosphatase 2C 11 OS=Oryza sativa subsp. japonica GN=Os02g0180000 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.938e-20
Identity = 63/173 (36.42%), Postives = 91/173 (52.60%), Query Frame = -1
Query:  348 GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLL---------KQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSA---------DNITCVVVRF 812
            G TA  A++  ++L+VAN GDSR VI R G A  +SRDHKP+   ER RI  AGGF+      R+ G L ++RA GD            KQ V A+P+I    +    +FL+LA DG+WD +++++ V  I      E +   + +    R  A         DN+T V+V+F
Sbjct:  160 GCTACVALIRNNQLVVANAGDSRCVISRAGQAYNLSRDHKPELEAERDRIVKAGGFIHMG---RINGSLNLTRAIGDMEFKQNKFLPPEKQIVTANPDINVVELCDDDDFLVLACDGIWDCMSSQQLVDFIHEHIQKESSLSAVCERVLDRCLAPSTIGGEGCDNMTMVLVQF 329          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C34_ARATH (Probable protein phosphatase 2C 34 OS=Arabidopsis thaliana GN=At3g05640 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.116e-19
Identity = 68/188 (36.17%), Postives = 107/188 (56.91%), Query Frame = -1
Query:  324 DAGSTASTAILVGDRLLVANVGDSRAVICRGGN-----AIAVSRDHKPDQTDERQRIEDAGGFVMWA----GTWRV------GGVLAVSRAFGDRLLKQY-VVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAY------QRGSA-DNITCVVVRFLANQGGSS 818
            ++G+TA T +  GD + +ANVGDSRAV+    +     A+ ++ D KP+   E +RI    G V       G  RV         LA+SRAFGD  +K Y +V+ PE+ +  I    +F+ILA+DG+WDV++N+EA+ ++    +  +AAKRL+Q+A       +RG A D+I+ V + F ++    S
Sbjct:  170 NSGTTALTIVRQGDVIYIANVGDSRAVLATVSDEGSLVAVQLTVDFKPNLPQEEERIIGCNGRVFCLQDEPGVHRVWQPVDESPGLAMSRAFGDYCIKDYGLVSVPEVTQRHISIRDQFIILATDGVWDVISNQEAIDIVSSTAERAKAAKRLVQQAVRAWNRKRRGIAMDDISAVCLFFHSSSSSPS 357          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PP2C1_CAEEL (Probable protein phosphatase 2C F42G9.1 OS=Caenorhabditis elegans GN=F42G9.1 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.904e-19
Identity = 51/136 (37.50%), Postives = 82/136 (60.29%), Query Frame = -1
Query:  438 DAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDR---------LLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPI 818
            D+G+TA   ++  D+++VAN GDSRAV+CR G A+ +S DHKP+   E  RI  AGG +      RV G L +SRAFGD          L +Q + A P+++ E +    EF+++A DG+W+ + +++ V  ++ +
Sbjct:  314 DSGTTACVCLVGKDKVIVANAGDSRAVLCRNGKAVDLSVDHKPEDEVETNRIHAAGGQI---EDGRVNGGLNLSRAFGDHAYKKNQELGLKEQMITALPDVKIEALTPEDEFIVVACDGIWNSMESQQVVDFVRDL 446          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: YR307_MIMIV (PP2C-like domain-containing protein R307 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R307 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.248e-19
Identity = 55/171 (32.16%), Postives = 91/171 (53.22%), Query Frame = -1
Query:  348 DRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGG-------FVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQ--------------------DPEEAAKRLMQEAYQRGSADNITCVVVRF 779
            + + V N+GD RAV+C+ G AI +++DHKP   DE++RI+               AG WR+G  L+VSR+FGD     YV   P++ +  + S  EF+I+A DG+WDV+ N EA+  ++  +                    + +  +++L   A  RGS DN++ +++ F
Sbjct:    7 ENIQVINIGDCRAVLCKNGLAIPLNKDHKPIWPDEKRRIDRVNEKYETNEKIHFDAGDWRIGD-LSVSRSFGDLDNTPYVTHVPDLFDYQLQSDDEFIIMACDGVWDVLENHEAINFVRDHRNDNHTEFYSIPGKYPNREAFESDNISRKLASYAIARGSTDNVSVIIIFF 176          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C73_ORYSJ (Probable protein phosphatase 2C 73 OS=Oryza sativa subsp. japonica GN=Os11g0109000 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.242e-19
Identity = 55/157 (35.03%), Postives = 93/157 (59.24%), Query Frame = -1
Query:  396 AGSTASTAILVGDRLLVANVGDSRAVICRGGN-----AIAVSRDHKPDQTDERQRIEDAGGFV-----------MWAGTWRVGGVLAVSRAFGDRLLKQY-VVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEA 815
            +G+TA T +  GD L++AN+GDSRAV+C   +     ++ ++ D KP+   E +RI ++ G V           MW       G LA++RAFGD  LK + ++  PE+    + +  +FL+LA+DG+WDV++N+E + ++    D  +AAK+L++ A
Sbjct:  158 SGTTAVTVVRQGDHLIIANLGDSRAVLCTRDSKDRPISVQLTTDLKPNLPSEAERILNSKGRVFAMDDEPDVPRMWLPDQDAPG-LAMARAFGDFCLKSHGLICTPEVYYRKLSAKDDFLVLATDGIWDVLSNKEVIKIVSSATDHSKAAKQLVERA 313          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C51_ARATH (Probable protein phosphatase 2C 51 OS=Arabidopsis thaliana GN=At3g63340 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 4.242e-19
Identity = 68/240 (28.33%), Postives = 120/240 (50.00%), Query Frame = -1
Query:  339 AIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVIC------------------------RG-------------GNAIA------VSRDHKPDQTDERQRIEDAGGFVM-WAGTWRVGGVLAVSRAFGDRLLKQY-VVADPEIQE-EVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEA------------AKRLMQEAYQRGSADNITCVVVRFLAN 884
            A+  A    D  F K  +N+  ++GSTA+ A++   +L+VA++GDS+A++C                        RG             GN +       +++DH P++ DE+ R+E AGG+V  WAG  RV G L VSRA GD   + Y V++ PE+ + + + ++  FL+++SDG+++ +  +E   ++  + +   +            A  L+  A+++GS DN+  VVV   +N
Sbjct:  209 ALLRAIHDIDVTFTKEASNRKLNSGSTATIALIADGQLMVASIGDSKALLCSEKFETLEEARATLVKLYRERRRNRGSSPSRFSDFKLEHGNGLLRFIAKELTKDHHPNREDEKIRVEAAGGYVTEWAGVPRVNGQLTVSRAIGDLTYRSYGVISAPEVMDWQPLVANDSFLVVSSDGIFEKLEVQEVCDLLWEVNNQTSSGAGVPSYCSISLADCLVNTAFEKGSMDNMAAVVVPLKSN 448          
The following BLAST results are available for this feature:
BLAST of CX069514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
P2C60_ARATH7.731e-2138.29Probable protein phosphatase 2C 60 OS=Arabidopsis ... [more]
PPM1B_HUMAN1.010e-2037.78Protein phosphatase 1B OS=Homo sapiens GN=PPM1B PE... [more]
PPMBL_MOUSE1.319e-2038.01Probable protein phosphatase 1B-like OS=Mus muscul... [more]
PP2C5_PARTE1.722e-2032.61Probable protein phosphatase 2C 5 OS=Paramecium te... [more]
P2C11_ORYSJ2.938e-2036.42Probable protein phosphatase 2C 11 OS=Oryza sativa... [more]
P2C34_ARATH1.116e-1936.17Probable protein phosphatase 2C 34 OS=Arabidopsis ... [more]
PP2C1_CAEEL1.904e-1937.50Probable protein phosphatase 2C F42G9.1 OS=Caenorh... [more]
YR307_MIMIV3.248e-1932.16PP2C-like domain-containing protein R307 OS=Acanth... [more]
P2C73_ORYSJ4.242e-1935.03Probable protein phosphatase 2C 73 OS=Oryza sativa... [more]
P2C51_ARATH4.242e-1928.33Probable protein phosphatase 2C 51 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_11A01_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11A01-B1-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069514 ID=CX069514; Name=CX069514; organism=Citrus sinensis; type=EST; length=884bp
TTTTTTTTTTTTTTTTCTTTTAGGAAATTGAAACTTTAGAAGTCTTTGCC
AATTCTTTACACATGCATACATACACATTTCTAGCTACATTTCGAGGACC
GAGAACAGATGTTAAACTTCGGACACATCTATTCCAGAGACTGATAATAC
GTAATACACATTAACGGCCGGGGTAAGCTTTTTGTTCATGTTCTATCATT
ACAAAGTACAACGAAACTGTAATTTTTCTATGACTACTAGCTGTAGACCA
CTGAAAGGATGCCCATGTAGAGAACAAAAGCAGAGCGGTGGCTATGAAAG
GATGTTCATGCAGAGCCAGGAAAGGATGAACCACCTTGATTGGCCAAGAA
CCGAACAACGACACAGGTGATGTTGTCTGCGCTGCCTCTCTGATATGCCT
CCTGCATCAGCCTCTTCGCTGCCTCCTCTGGATCCTGGATTGGTTTGATC
ATCGCAACAGCTTCCTCATTTGTGACGACATCCCAAAGTCCATCACTTGC
AAGGATAAGAAACTCAAGGGAGCTGTCAATAACTTCCTCCTGAATTTCGG
GATCAGCAACAACATACTGCTTCAAGAGTCTGTCACCAAATGCGCGAGAA
ACGGCAAGAACTCCTCCCACTCTCCAAGTTCCAGCCCACATCACAAACCC
TCCTGCATCCTCAATCCGTTGACGCTCATCTGTTTGGTCTGGTTTGTGAT
CTCGCGATACGGCAATAGCATTACCGCCCCTGCATATAACAGCTCTGGAG
TCACCCACATTTGCAACAAGTAAGCGATCACCAACAAGGATGGCAGTGGA
AGCAGTAGATCCAGCATCCCTGTTTTGATTGTTTTCTGACTTCAGAAATT
CCGAGTCTGTGTGGCTGTATGCATCAGCTATTGC
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