CX069514

Overview
NameCX069514
Unique NameCX069514
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7623 contig Csv1_Contig7623:203..1085. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C21_ARATH (Probable protein phosphatase 2C 21 OS=Arabidopsis thaliana GN=PPC4-2 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.242e-19
Identity = 63/174 (36.21%), Postives = 92/174 (52.87%), Query Frame = -1
Query:  348 AGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLL---------KQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSA---------DNITCVVVRF 815
            +G TA  A++   +L VAN GDSR VI R   A  +S+DHKPD   E++RI  AGGF+  AG  R+ G L ++RA GD            KQ V ADP+I    +    +FL++A DG+WD ++++E V  I      E     + ++   R  A         DN+T ++V+F
Sbjct:  159 SGCTACVALIKDKKLFVANAGDSRCVISRKSQAYNLSKDHKPDLEVEKERILKAGGFI-HAG--RINGSLNLTRAIGDMEFKQNKFLPSEKQMVTADPDINTIDLCDDDDFLVVACDGIWDCMSSQELVDFIHEQLKSETKLSTVCEKVVDRCLAPDTATGEGCDNMTIILVQF 329          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PPM1A_BOVIN (Protein phosphatase 1A OS=Bos taurus GN=PPM1A PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.540e-19
Identity = 62/179 (34.64%), Postives = 92/179 (51.40%), Query Frame = -1
Query:  348 SENNQNRD-AGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQE-EVIDSSLEFLILASDGLWDVVTNEEAVAMIKP----IQDPEEAAKRLMQEAYQRGSADNITCVVVRF 839
            SE     D +GSTA   ++        N GDSR ++CR       ++DHKP    E++RI++AGG VM     RV G LAVSRA GD   K         Q V  +PE+ + E  +   +F+ILA DG+WDV+ NEE    ++       D E+    ++     +GS DN++ +++ F
Sbjct:  116 SEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVYFFTQDHKPSNPLEKERIQNAGGSVM---IQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICF 291          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PP2C2_CAEEL (Probable protein phosphatase 2C T23F11.1 OS=Caenorhabditis elegans GN=T23F11.1 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 5.540e-19
Identity = 70/202 (34.65%), Postives = 97/202 (48.02%), Query Frame = -1
Query:  336 AIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK----PIQDP----EEAAKRLMQEAYQRG--SADNITCVVVRFLANQ 884
            AI   +   D +    E  ++  +G+TA   ++    +   N GDSRAV    G A  +S DHKP    E +RI  AGG   W    RV G LA+SRA GD   K         Q V A P++  + +    EF++LA DG+WDV+TN+E V  ++      +DP    EE   R +    Q G    DN+T V+V  L  Q
Sbjct:   92 AIEKGFLELDQQMRVDEETKDDVSGTTAVVVLIKEGDVYCGNAGDSRAVSSVVGEARPLSFDHKPSHETEARRIIAAGG---WVEFNRVNGNLALSRALGDFAFKNCDTKPAEEQIVTAFPDVITDKLTPDHEFIVLACDGIWDVMTNQEVVDFVREKLAEKRDPQSICEELLTRCLAPDCQMGGLGCDNMTVVLVGLLHGQ 290          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C76_ORYSJ (Putative protein phosphatase 2C 76 OS=Oryza sativa subsp. japonica GN=Os11g0586100 PE=3 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 5.540e-19
Identity = 65/226 (28.76%), Postives = 108/226 (47.79%), Query Frame = -1
Query:  354 AYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGG--------------------------------------NAIAVSRDHKPDQTDERQRIEDAGGFVM-WAGTWRVGGVLAVSRAFGDRLLKQY-VVADPEIQE-EVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQ------------DPEEAAKRLMQEAYQRGSADNITCVVV 872
            A    D  F K     N ++GSTA+  ++V  +++ ANVGDS+A +C                                         N   +++DH PD+ DER R+E AGG+V+ WAG  RV G LA+SRA GD   K+Y V+  PE+ E + + ++  FLI +SDG+++ +T ++   ++  ++                 A  ++  A ++G+ DN+  V+V
Sbjct:  230 AVHDVDLTFSKEALRNNFESGSTAAVILIVDGQIIAANVGDSKAFLCSESHDSSIDKKTSVVSGKRRRKRNSNNRDDFALANYDGPFYNVKELTKDHHPDREDERSRVEAAGGYVLEWAGVHRVNGELALSRAIGDVPYKRYGVIPTPELTEWQSLSANDTFLIASSDGVFEKMTMQDVCDLMLRVKLGVNQELGSFAVTQRNLADYVVDLALEKGTTDNVAAVIV 455          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PPM1A_RAT (Protein phosphatase 1A OS=Rattus norvegicus GN=Ppm1a PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.451e-19
Identity = 62/179 (34.64%), Postives = 92/179 (51.40%), Query Frame = -1
Query:  348 SENNQNRD-AGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQE-EVIDSSLEFLILASDGLWDVVTNEEAVAMIKP----IQDPEEAAKRLMQEAYQRGSADNITCVVVRF 839
            SE     D +GSTA   ++        N GDSR ++CR       ++DHKP    E++RI++AGG VM     RV G LAVSRA GD   K         Q V  +PE+ + E  +   +F+ILA DG+WDV+ NEE    ++       D E+    ++     +GS DN++ +++ F
Sbjct:  116 SEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVM---IQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICF 291          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PPM1A_RABIT (Protein phosphatase 1A OS=Oryctolagus cuniculus GN=PPM1A PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.451e-19
Identity = 62/179 (34.64%), Postives = 92/179 (51.40%), Query Frame = -1
Query:  348 SENNQNRD-AGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQE-EVIDSSLEFLILASDGLWDVVTNEEAVAMIKP----IQDPEEAAKRLMQEAYQRGSADNITCVVVRF 839
            SE     D +GSTA   ++        N GDSR ++CR       ++DHKP    E++RI++AGG VM     RV G LAVSRA GD   K         Q V  +PE+ + E  +   +F+ILA DG+WDV+ NEE    ++       D E+    ++     +GS DN++ +++ F
Sbjct:  116 SEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVM---IQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICF 291          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PPM1A_MOUSE (Protein phosphatase 1A OS=Mus musculus GN=Ppm1a PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.451e-19
Identity = 62/179 (34.64%), Postives = 92/179 (51.40%), Query Frame = -1
Query:  348 SENNQNRD-AGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQE-EVIDSSLEFLILASDGLWDVVTNEEAVAMIKP----IQDPEEAAKRLMQEAYQRGSADNITCVVVRF 839
            SE     D +GSTA   ++        N GDSR ++CR       ++DHKP    E++RI++AGG VM     RV G LAVSRA GD   K         Q V  +PE+ + E  +   +F+ILA DG+WDV+ NEE    ++       D E+    ++     +GS DN++ +++ F
Sbjct:  116 SEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVM---IQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICF 291          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PPM1A_HUMAN (Protein phosphatase 1A OS=Homo sapiens GN=PPM1A PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.451e-19
Identity = 62/179 (34.64%), Postives = 92/179 (51.40%), Query Frame = -1
Query:  348 SENNQNRD-AGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQE-EVIDSSLEFLILASDGLWDVVTNEEAVAMIKP----IQDPEEAAKRLMQEAYQRGSADNITCVVVRF 839
            SE     D +GSTA   ++        N GDSR ++CR       ++DHKP    E++RI++AGG VM     RV G LAVSRA GD   K         Q V  +PE+ + E  +   +F+ILA DG+WDV+ NEE    ++       D E+    ++     +GS DN++ +++ F
Sbjct:  116 SEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVM---IQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICF 291          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PP2C3_SCHPO (Protein phosphatase 2C homolog 3 OS=Schizosaccharomyces pombe GN=ptc3 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.234e-18
Identity = 66/206 (32.04%), Postives = 99/206 (48.06%), Query Frame = -1
Query:  321 AIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGD--------RLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK----PIQDPEEAAKRLMQEAYQRGS------ADNITCVVVRFLANQGGSSF 884
            A+  ++ + D   L  +      +G TA+  + VG++L  AN GDSR V+   G A  +S DHKP    E+ RI  AGGFV +    RV G LA+SRA GD           KQ V A P++    I    EF++LA DG+WD  T+++ +  ++         E+ A+ LM       +       DN+T  +V  L     S++
Sbjct:   95 ALKSSFLNADKAILDDDQFHTDPSGCTATVVLRVGNKLYCANAGDSRTVLGSKGIAKPLSADHKPSNEAEKARICAAGGFVDFG---RVNGNLALSRAIGDFEFKNSNLEPEKQIVTALPDVVVHEITDDDEFVVLACDGIWDCKTSQQVIEFVRRGIVAGTSLEKIAENLMDNCIASDTETTGLGCDNMTVCIVALLQENDKSAW 297          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C20_ORYSJ (Probable protein phosphatase 2C 20 OS=Oryza sativa subsp. japonica GN=Os02g0600000 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.612e-18
Identity = 61/181 (33.70%), Postives = 93/181 (51.38%), Query Frame = -1
Query:  348 GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVM----------WAGTWRVG-----GVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRG--SADNITCVVVRF 812
            GSTA   ++ GD+L+V + GDSR V+ R G A A+S DHKPD   ER+R+++AGG  +          W    + G     G +++SR+ GD   K         Q +  +P+I    I   +EFL++A++GLW  +TN+  V            A+ + +E  Q G  S DN T ++V F
Sbjct:  193 GSTACVVVIRGDQLIVGHAGDSRCVLSRNGQASALSVDHKPDSESERERVQNAGGVAVGYSYRKIMGRWVTKKQWGFTDFKGRVSISRSIGDFACKKNERLPPEDQMLTCNPDILTMDITDDMEFLVIATEGLWCNMTNQNVVDHTHDRLLEGAEARVICEELVQFGLPSGDNTTVILVLF 373          
The following BLAST results are available for this feature:
BLAST of CX069514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
P2C21_ARATH4.242e-1936.21Probable protein phosphatase 2C 21 OS=Arabidopsis ... [more]
PPM1A_BOVIN5.540e-1934.64Protein phosphatase 1A OS=Bos taurus GN=PPM1A PE=2... [more]
PP2C2_CAEEL5.540e-1934.65Probable protein phosphatase 2C T23F11.1 OS=Caenor... [more]
P2C76_ORYSJ5.540e-1928.76Putative protein phosphatase 2C 76 OS=Oryza sativa... [more]
PPM1A_RAT9.451e-1934.64Protein phosphatase 1A OS=Rattus norvegicus GN=Ppm... [more]
PPM1A_RABIT9.451e-1934.64Protein phosphatase 1A OS=Oryctolagus cuniculus GN... [more]
PPM1A_MOUSE9.451e-1934.64Protein phosphatase 1A OS=Mus musculus GN=Ppm1a PE... [more]
PPM1A_HUMAN9.451e-1934.64Protein phosphatase 1A OS=Homo sapiens GN=PPM1A PE... [more]
PP2C3_SCHPO1.234e-1832.04Protein phosphatase 2C homolog 3 OS=Schizosaccharo... [more]
P2C20_ORYSJ1.612e-1833.70Probable protein phosphatase 2C 20 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_11A01_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11A01-B1-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069514 ID=CX069514; Name=CX069514; organism=Citrus sinensis; type=EST; length=884bp
TTTTTTTTTTTTTTTTCTTTTAGGAAATTGAAACTTTAGAAGTCTTTGCC
AATTCTTTACACATGCATACATACACATTTCTAGCTACATTTCGAGGACC
GAGAACAGATGTTAAACTTCGGACACATCTATTCCAGAGACTGATAATAC
GTAATACACATTAACGGCCGGGGTAAGCTTTTTGTTCATGTTCTATCATT
ACAAAGTACAACGAAACTGTAATTTTTCTATGACTACTAGCTGTAGACCA
CTGAAAGGATGCCCATGTAGAGAACAAAAGCAGAGCGGTGGCTATGAAAG
GATGTTCATGCAGAGCCAGGAAAGGATGAACCACCTTGATTGGCCAAGAA
CCGAACAACGACACAGGTGATGTTGTCTGCGCTGCCTCTCTGATATGCCT
CCTGCATCAGCCTCTTCGCTGCCTCCTCTGGATCCTGGATTGGTTTGATC
ATCGCAACAGCTTCCTCATTTGTGACGACATCCCAAAGTCCATCACTTGC
AAGGATAAGAAACTCAAGGGAGCTGTCAATAACTTCCTCCTGAATTTCGG
GATCAGCAACAACATACTGCTTCAAGAGTCTGTCACCAAATGCGCGAGAA
ACGGCAAGAACTCCTCCCACTCTCCAAGTTCCAGCCCACATCACAAACCC
TCCTGCATCCTCAATCCGTTGACGCTCATCTGTTTGGTCTGGTTTGTGAT
CTCGCGATACGGCAATAGCATTACCGCCCCTGCATATAACAGCTCTGGAG
TCACCCACATTTGCAACAAGTAAGCGATCACCAACAAGGATGGCAGTGGA
AGCAGTAGATCCAGCATCCCTGTTTTGATTGTTTTCTGACTTCAGAAATT
CCGAGTCTGTGTGGCTGTATGCATCAGCTATTGC
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