CX069514

Overview
NameCX069514
Unique NameCX069514
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7623 contig Csv1_Contig7623:203..1085. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C03_ARATH (Protein phosphatase 2C 3 OS=Arabidopsis thaliana GN=AIP1 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.406e-30
Identity = 66/123 (53.66%), Postives = 88/123 (71.54%), Query Frame = -1
Query:  444 GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK 812
            GSTA  +++  ++++VAN GDSRAV+CR G A+ +S DHKPD+ DE  RI++AGG V++    RV GVLA+SRA GD  LK YV ++PE+         EFLILA+DGLWDVVTNE A  M++
Sbjct:  233 GSTAVVSVITPEKIIVANCGDSRAVLCRNGKAVPLSTDHKPDRPDELDRIQEAGGRVIYWDGARVLGVLAMSRAIGDNYLKPYVTSEPEVTVTDRTEEDEFLILATDGLWDVVTNEAACTMVR 355          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C78_ARATH (Probable protein phosphatase 2C 78 OS=Arabidopsis thaliana GN=At5g59220 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.836e-30
Identity = 80/187 (42.78%), Postives = 109/187 (58.29%), Query Frame = -1
Query:  354 GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK----------------------------------PIQDPEEAAKRLMQEAYQRGSADNITCVVV 812
            GSTA  ++L  ++++VAN GDSRAV+CR G AIA+S DHKPD+ DE  RI+ AGG V++    RV GVLA+SRA GD  LK YV++ PE+      +  +FLILASDGLWDVV+NE A ++++                                  P +  EEA+  L + A  R S+DN++ VVV
Sbjct:  221 GSTAVVSVLTPEKIIVANCGDSRAVLCRNGKAIALSSDHKPDRPDELDRIQAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISRPEVTVTDRANGDDFLILASDGLWDVVSNETACSVVRMCLRGKVNGQVSSSPEREMTGVGAGNVVVGGGDLPDKACEEASLLLTRLALARQSSDNVSVVVV 407          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C68_ORYSJ (Probable protein phosphatase 2C 68 OS=Oryza sativa subsp. japonica GN=Os09g0325700 PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 4.090e-30
Identity = 83/175 (47.43%), Postives = 106/175 (60.57%), Query Frame = -1
Query:  354 DSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGG-FVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPI------QDPEEAAKRLMQEAYQRGSADNITCVVV 857
            +S   + E  +    GSTA  A++   R++VAN GDSRAV+CRGG  + +S DHKPD+ DE +RIE AGG  + W G  RV GVLA+SR+ GD  LK YV A PE+         E LILASDGLWDVV+NE A  + +        +   EAA  L + A  R S+DNI+ VVV
Sbjct:  177 ESGSCRCEGQKCDHVGSTAVVAVVEESRVVVANCGDSRAVLCRGGAPVQLSSDHKPDRPDELERIEAAGGRVIFWEGA-RVLGVLAMSRSIGDAYLKPYVTAVPEVTVTGRSDFDECLILASDGLWDVVSNEAACEVAQSCLRRGRQRWCAEAAAVLTKLALARRSSDNISVVVV 350          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C49_ARATH (Probable protein phosphatase 2C 49 OS=Arabidopsis thaliana GN=At3g62260 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.976e-30
Identity = 74/171 (43.27%), Postives = 108/171 (63.16%), Query Frame = -1
Query:  330 GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK----PIQDPEEAAKRLMQEAYQRGSADNITCVVVRFLANQGG 812
            G+TA TA++ G  L+VAN GD RAV+CR G AI +S DHKP    ER+R+E++GGF+   G   +  VLAV+RA GD  LK        ++++PEI++  +    EFL++  DG+WDV+T++EAV++++       DP   A+ L+ EA  R S DN+T VVV F+    G
Sbjct:  187 GTTALTALICGRLLMVANAGDCRAVLCRKGRAIDMSEDHKPINLLERRRVEESGGFITNDG--YLNEVLAVTRALGDWDLKLPHGSQSPLISEPEIKQITLTEDDEFLVIGCDGIWDVLTSQEAVSIVRRGLNRHNDPTRCARELVMEALGRNSFDNLTAVVVCFMTMDRG 355          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C77_ORYSJ (Probable protein phosphatase 2C 77 OS=Oryza sativa subsp. japonica GN=Os12g0198200 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 9.111e-30
Identity = 86/189 (45.50%), Postives = 109/189 (57.67%), Query Frame = -1
Query:  354 AIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVI-CRGGNAIAVSRDHKPDQTDERQRIEDAGGFVM--WAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVI--DSSLEFLILASDGLWDVVTNEEAV-------AMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVV 884
            AI  AY  TDSEFL    +Q    G+ A+TA++    L V+NVGD RAV+  RGG A A++ DH P + DER RIE  GG+V    +G WRV   LAVSRAFGD  +KQ+V  +PE     +  D    FL+LASDGLW  V+N+EAV       A    +    +  K L   A  RGS D+IT +VV
Sbjct:  229 AIRAAYLTTDSEFL----SQGVRGGACAATALVKDGELYVSNVGDCRAVLGSRGGVATALTSDHTPGREDERLRIESTGGYVSCGGSGVWRVQDSLAVSRAFGDAGVKQWVTCEPETARVSLAADGDCRFLVLASDGLWCKVSNQEAVDAVAAAAAAAAGVAGSTDPCKELAAMARSRGSRDDITVMVV 413          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C56_ARATH (Protein phosphatase 2C 56 OS=Arabidopsis thaliana GN=ABI1 PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 2.030e-29
Identity = 86/205 (41.95%), Postives = 113/205 (55.12%), Query Frame = -1
Query:  354 AIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGG-FVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI-------------------------KPIQDPE--EAAKRLMQEAYQRGSADNITCVVV 884
            A+ +++   DSE    E+      GST+  A++    + VAN GDSRAV+CRG  A+ +S DHKPD+ DE  RIE AGG  + W G  RV GVLA+SR+ GDR LK  ++ DPE+         + LILASDG+WDV+T+EEA  M                          K  +DP    AA+ L + A QRGS DNI+ VVV
Sbjct:  220 ALFNSFLRVDSEI---ESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNGA-RVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRILLWHKKNAVAGDASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVV 420          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C30_ORYSJ (Probable protein phosphatase 2C 30 OS=Oryza sativa subsp. japonica GN=Os03g0268600 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.030e-29
Identity = 71/124 (57.26%), Postives = 89/124 (71.77%), Query Frame = -1
Query:  444 GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQ-EEVIDSSLEFLILASDGLWDVVTNEEAVAMIK 812
            GSTA  A+L    ++VAN GDSRAV+CRGG AI +S DHKPD+ DE +RI  AGG V++    RV G+LA+SRA GD  LK YV+ DPE++  E  D   EFLILASDGLWDVV+NE A  +++
Sbjct:  191 GSTAVVAVLGPRHVVVANCGDSRAVLCRGGAAIPLSCDHKPDRPDELERIHAAGGRVIFWDGARVFGMLAMSRAIGDSYLKPYVICDPEVRVMERKDGEDEFLILASDGLWDVVSNEVACNVVR 314          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C77_ARATH (Protein phosphatase 2C 77 OS=Arabidopsis thaliana GN=ABI2 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.462e-29
Identity = 85/204 (41.67%), Postives = 115/204 (56.37%), Query Frame = -1
Query:  354 AIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVM-WAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPI------------------------QDPE--EAAKRLMQEAYQRGSADNITCVVV 884
            A+ +++   DSE +++  +     GST+  A++    + VAN GDSRAV+CRG   +A+S DHKPD+ DE  RIE AGG V+ W G  RV GVLA+SR+ GDR LK  V+ DPE+         + LILASDGLWDV+TNEE   + +                          +DP    AA+ L + A Q+GS DNI+ VVV
Sbjct:  208 ALFNSFMRVDSE-IETVAHAPETVGSTSVVAVVFPTHIFVANCGDSRAVLCRGKTPLALSVDHKPDRDDEAARIEAAGGKVIRWNGA-RVFGVLAMSRSIGDRYLKPSVIPDPEVTSVRRVKEDDCLILASDGLWDVMTNEEVCDLARKRILLWHKKNAMAGEALLPAEKRGEGKDPAAMSAAEYLSKMALQKGSKDNISVVVV 409          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C75_ARATH (Probable protein phosphatase 2C 75 OS=Arabidopsis thaliana GN=AHG1 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.713e-29
Identity = 80/180 (44.44%), Postives = 104/180 (57.78%), Query Frame = -1
Query:  354 AGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK-----------------------PIQDPEE---AAKRLMQEAYQRGSADNITCVVV 815
            +GSTA TA+L  D ++VAN GDSRAV+CR G AI +S DHKPD+ DER RIE AGG V+     RV G+LA SRA GDR LK  V  +PE+     +S  E L+LASDGLWDV++++ A  + +                         Q+P     AA  L + A  R S+DNI+ VV+
Sbjct:  230 SGSTAVTAVLTHDHIIVANTGDSRAVLCRNGMAIPLSNDHKPDRPDERARIEAAGGRVLVVDGARVEGILATSRAIGDRYLKPMVAWEPEVTFMRRESGDECLVLASDGLWDVLSSQLACDIARFCLREETPSSLDLNRMAQEDDNDGEQNPSRSVLAATLLTRLALGRQSSDNISVVVI 409          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C37_ARATH (Protein phosphatase 2C 37 OS=Arabidopsis thaliana GN=PP2CA PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.713e-29
Identity = 77/167 (46.11%), Postives = 102/167 (61.08%), Query Frame = -1
Query:  354 GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPI-------QDPE-------EAAKRLMQEAYQRGSADNITCVVV 812
            GSTA  +++  ++++V+N GDSRAV+CR G AI +S DHKPD+ DE  RI+ AGG V++    RV GVLA+SRA GD  LK YV+ DPE+         E LILASDGLWDVV NE A  + +          D +       +AA  L + A  R S+DN++ VVV
Sbjct:  221 GSTAVVSVVTPEKIIVSNCGDSRAVLCRNGVAIPLSVDHKPDRPDELIRIQQAGGRVIYWDGARVLGVLAMSRAIGDNYLKPYVIPDPEVTVTDRTDEDECLILASDGLWDVVPNETACGVARMCLRGAGAGDDSDAAHNACSDAALLLTKLALARQSSDNVSVVVV 387          
The following BLAST results are available for this feature:
BLAST of CX069514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
P2C03_ARATH1.406e-3053.66Protein phosphatase 2C 3 OS=Arabidopsis thaliana G... [more]
P2C78_ARATH1.836e-3042.78Probable protein phosphatase 2C 78 OS=Arabidopsis ... [more]
P2C68_ORYSJ4.090e-3047.43Probable protein phosphatase 2C 68 OS=Oryza sativa... [more]
P2C49_ARATH6.976e-3043.27Probable protein phosphatase 2C 49 OS=Arabidopsis ... [more]
P2C77_ORYSJ9.111e-3045.50Probable protein phosphatase 2C 77 OS=Oryza sativa... [more]
P2C56_ARATH2.030e-2941.95Protein phosphatase 2C 56 OS=Arabidopsis thaliana ... [more]
P2C30_ORYSJ2.030e-2957.26Probable protein phosphatase 2C 30 OS=Oryza sativa... [more]
P2C77_ARATH3.462e-2941.67Protein phosphatase 2C 77 OS=Arabidopsis thaliana ... [more]
P2C75_ARATH7.713e-2944.44Probable protein phosphatase 2C 75 OS=Arabidopsis ... [more]
P2C37_ARATH7.713e-2946.11Protein phosphatase 2C 37 OS=Arabidopsis thaliana ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_11A01_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11A01-B1-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069514 ID=CX069514; Name=CX069514; organism=Citrus sinensis; type=EST; length=884bp
TTTTTTTTTTTTTTTTCTTTTAGGAAATTGAAACTTTAGAAGTCTTTGCC
AATTCTTTACACATGCATACATACACATTTCTAGCTACATTTCGAGGACC
GAGAACAGATGTTAAACTTCGGACACATCTATTCCAGAGACTGATAATAC
GTAATACACATTAACGGCCGGGGTAAGCTTTTTGTTCATGTTCTATCATT
ACAAAGTACAACGAAACTGTAATTTTTCTATGACTACTAGCTGTAGACCA
CTGAAAGGATGCCCATGTAGAGAACAAAAGCAGAGCGGTGGCTATGAAAG
GATGTTCATGCAGAGCCAGGAAAGGATGAACCACCTTGATTGGCCAAGAA
CCGAACAACGACACAGGTGATGTTGTCTGCGCTGCCTCTCTGATATGCCT
CCTGCATCAGCCTCTTCGCTGCCTCCTCTGGATCCTGGATTGGTTTGATC
ATCGCAACAGCTTCCTCATTTGTGACGACATCCCAAAGTCCATCACTTGC
AAGGATAAGAAACTCAAGGGAGCTGTCAATAACTTCCTCCTGAATTTCGG
GATCAGCAACAACATACTGCTTCAAGAGTCTGTCACCAAATGCGCGAGAA
ACGGCAAGAACTCCTCCCACTCTCCAAGTTCCAGCCCACATCACAAACCC
TCCTGCATCCTCAATCCGTTGACGCTCATCTGTTTGGTCTGGTTTGTGAT
CTCGCGATACGGCAATAGCATTACCGCCCCTGCATATAACAGCTCTGGAG
TCACCCACATTTGCAACAAGTAAGCGATCACCAACAAGGATGGCAGTGGA
AGCAGTAGATCCAGCATCCCTGTTTTGATTGTTTTCTGACTTCAGAAATT
CCGAGTCTGTGTGGCTGTATGCATCAGCTATTGC
back to top