CX069514

Overview
NameCX069514
Unique NameCX069514
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7623 contig Csv1_Contig7623:203..1085. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C24_ARATH (Probable protein phosphatase 2C 24 OS=Arabidopsis thaliana GN=At2g29380 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.713e-29
Identity = 77/171 (45.03%), Postives = 105/171 (61.40%), Query Frame = -1
Query:  354 GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVID-SSLEFLILASDGLWDVVTNEEAVAMIKPI----------QDP-------EEAAKRLMQEAYQRGSADNITCVVV 812
            GSTA  +++  D+++VAN GDSRAV+CR G  + +S DHKPD+ DE  RIE AGG V++    RV GVLA+SRA GD  LK YV  +PE+   + D    + LILASDGLWDVV+NE A ++ +            +DP        EA+  L + A  R S+DN++ VV+
Sbjct:  190 GSTAVVSVITPDKIVVANCGDSRAVLCRNGKPVPLSTDHKPDRPDELDRIEGAGGRVIYWDCPRVLGVLAMSRAIGDNYLKPYVSCEPEV--TITDRRDDDCLILASDGLWDVVSNETACSVARMCLRGGGRRQDNEDPAISDKACTEASVLLTKLALARNSSDNVSVVVI 358          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C06_ORYSJ (Probable protein phosphatase 2C 6 OS=Oryza sativa subsp. japonica GN=Os01g0583100 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.713e-29
Identity = 82/210 (39.05%), Postives = 112/210 (53.33%), Query Frame = -1
Query:  336 AIADAYSHTDSEF----LKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK-------------PIQDP----------EEAAKRLMQEAYQRGSADNITCVVVRFLANQ 884
            A  D +S  D E      + E       GSTA  A++    ++VAN GDSRAV+CRG   + +S DHKP++ DE  RIE  GG V+    +RV GVLA+SR+ GDR LK +++  PEI         E L+LASDGLWDV++NEE   + +             P   P          E AA+ L + A Q+GS DNI+ +VV   A++
Sbjct:  252 AFVDCFSRVDEEVGGNASRGEAVAPETVGSTAVVAVICSSHIIVANCGDSRAVLCRGKQPVPLSVDHKPNREDEYARIEAEGGKVIQWNGYRVFGVLAMSRSIGDRYLKPWIIPVPEITIVPRAKDDECLVLASDGLWDVMSNEEVCDVARKRILLWHKKNGTNPASAPRSGDSSDPAAEAAAECLSKLALQKGSKDNISVIVVDLKAHR 461          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C47_ARATH (Probable protein phosphatase 2C 47 OS=Arabidopsis thaliana GN=At3g51470 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.007e-28
Identity = 78/189 (41.27%), Postives = 118/189 (62.43%), Query Frame = -1
Query:  348 AIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQY------VVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK----PIQDPEEAAKRLMQEAYQRGSADNITCVVVRF 884
            A   A+  TD   L   ++ +R +G+TA TA+++   +L+AN GDSRAV+ + G AI +S+DHKP+ T ER RIE  GG V++ G   + G L+V+RA GD  +K        +  +PE++E V+    E+LI+  DGLWDV++++ AV M++       DPE  ++ L++EA QR S DN+T VVV F
Sbjct:  143 ATRSAFVKTDHA-LADASSLDRSSGTTALTALILDKTMLIANAGDSRAVLGKRGRAIELSKDHKPNCTSERLRIEKLGG-VIYDG--YLNGQLSVARALGDWHIKGTKGSLCPLSCEPELEEIVLTEEDEYLIMGCDGLWDVMSSQCAVTMVRRELMQHNDPERCSQALVKEALQRNSCDNLTVVVVCF 327          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PP2C1_YEAST (Protein phosphatase 2C homolog 1 OS=Saccharomyces cerevisiae GN=PTC1 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.316e-28
Identity = 67/141 (47.52%), Postives = 92/141 (65.25%), Query Frame = -1
Query:  354 RLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVV 776
            +L  ANVGDSR V+ R GN+I ++ DHK   T E QR+E AGG +M +   RV G+LAV+R+ GD+     VV  P      I S  +FLILA DGLWDV+ +++A  +IK I +P EAAK L++ A + G+ DN+T +VV
Sbjct:  142 KLYTANVGDSRIVLFRNGNSIRLTYDHKASDTLEMQRVEQAGGLIMKS---RVNGMLAVTRSLGDKFFDSLVVGSPFTTSVEITSEDKFLILACDGLWDVIDDQDACELIKDITEPNEAAKVLVRYALENGTTDNVTVMVV 279          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C47_ORYSJ (Probable protein phosphatase 2C 47 OS=Oryza sativa subsp. japonica GN=Os05g0134200 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.316e-28
Identity = 68/174 (39.08%), Postives = 113/174 (64.94%), Query Frame = -1
Query:  333 NRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI----KPIQDPEEAAKRLMQEAYQRGSADNITCVVVRFLANQG 824
            +R +G+TA TA++ G +LLVAN GD RAV+CR G A+ +SRDH+ +  +E +R+  +GG++       + GVL+V+RA GD  +K        ++A+PE ++ ++    EFLI+  DG+WDV+T++ AV+++    +   DPE  A+ L+ EA +  +ADN+T +VV F++  G
Sbjct:  181 SRSSGTTALTALVFGRQLLVANAGDCRAVLCRRGVAMEMSRDHRANYAEECERVAASGGYI---EDGYLNGVLSVTRALGDWDMKMPDGSISPLIAEPEFRQTMLTEDDEFLIMGCDGIWDVMTSQHAVSIVRRGLRQHDDPERCARELVMEAKRLETADNLTVIVVCFVSELG 351          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C02_ORYSJ (Probable protein phosphatase 2C 2 OS=Oryza sativa subsp. japonica GN=Os01g0295700 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.316e-28
Identity = 69/177 (38.98%), Postives = 108/177 (61.02%), Query Frame = -1
Query:  324 NRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKP----IQDPEEAAKRLMQEAYQRGSADNITCVVVRFLANQGGSS 824
            +R +G+TA  A++ G +LLVAN GD RAV+CR G A+ +SRDH+P    E +RI + GG++       + GVL+V+RA GD  +K        ++A+PE Q+  +    EFLI+  DG+WDV++++ AV +++       DPE  A+ L  EA +  + DN+T +V+ F +  GG S
Sbjct:  174 SRSSGTTALAALIFGRQLLVANAGDCRAVLCRKGVAVEMSRDHRPTYDAEHERITECGGYI---EDGYLNGVLSVTRALGDWDMKMPQGSRSPLIAEPEFQQTTLTEDDEFLIIGCDGIWDVMSSQHAVTIVRKGLRRHDDPERCARELAMEAKRLQTFDNLTVIVICFGSELGGGS 347          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C43_ARATH (Probable protein phosphatase 2C 43 OS=Arabidopsis thaliana GN=At3g17250 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.931e-28
Identity = 71/179 (39.66%), Postives = 110/179 (61.45%), Query Frame = -1
Query:  348 LKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQY---------VVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKP----IQDPEEAAKRLMQEAYQRGSADNITCVVVRF 845
            ++ E   +   G+TA TA+++G  L+VANVGD RAV+CR G A+ +S DHK     ER+R+ED GG+  + G +  G  LAV+RA GD  +K++         +++DP+IQ+ ++    EFLI+  DG+WDV+T++ AV  ++       DP   A  L +EA +  S+DN+T VV+ F
Sbjct:  218 MEDERIVSSSCGTTALTALVIGRHLMVANVGDCRAVLCRKGKAVDMSFDHKSTFEPERRRVEDLGGY--FEGEYLYGD-LAVTRALGDWSIKRFSPLGESLSPLISDPDIQQMILTEEDEFLIMGCDGVWDVMTSQYAVTFVRQGLRRHGDPRRCAMELGREALRLDSSDNVTVVVICF 393          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PPM1F_HUMAN (Protein phosphatase 1F OS=Homo sapiens GN=PPM1F PE=1 SV=3)

HSP 1 Score: 125.561 bits (314), Expect = 3.828e-28
Identity = 66/182 (36.26%), Postives = 104/182 (57.14%), Query Frame = -1
Query:  354 AIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEE-----AAKRLMQEAYQRGSADNITCVVV 884
            A+ +A+  TD  FL+    +   +G+T   A++ G  L VA +GDS+ ++ + G  + +   H+P++ DE+ RIE  GGFV     WRV G LAVSRA GD   K YV  + +     +  S ++L+LA DG +DVV ++E V +++     ++      A+ L+  A +RGS DNIT +VV
Sbjct:  230 ALREAFRRTDQMFLRKAKRERLQSGTTGVCALIAGATLHVAWLGDSQVILVQQGQVVKLMEPHRPERQDEKARIEALGGFVSHMDCWRVNGTLAVSRAIGDVFQKPYVSGEADAASRALTGSEDYLLLACDGFFDVVPHQEVVGLVQSHLTRQQGSGLRVAEELVAAARERGSHDNITVMVV 411          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PP2C1_SCHPO (Protein phosphatase 2C homolog 1 OS=Schizosaccharomyces pombe GN=ptc1 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.000e-28
Identity = 76/188 (40.43%), Postives = 107/188 (56.91%), Query Frame = -1
Query:  333 DAYSHTDSEFLKSENNQNRDAGSTASTAILVGDR------LLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVI-DSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRFLANQG 875
            + +   +S+  K+ +N     G TA+ A    ++      L  AN GD+R V+CR G AI +S DHK    +E +R+   GG ++     R+ GVLAV+RA GD  LK+ V A P   E  I +   EF I+A DGLWDVV+++EAV  ++    P EAA RL++ A +R S DNITC+VV    N G
Sbjct:  146 ETFVEVNSKIAKATHNDI--CGCTAAVAFFRYEKNRTRRVLYTANAGDARIVLCRDGKAIRLSYDHKGSDANESRRVTQLGGLMVQN---RINGVLAVTRALGDTYLKELVSAHPFTTETRIWNGHDEFFIIACDGLWDVVSDQEAVDFVRNFVSPREAAVRLVEFALKRLSTDNITCIVVNLTRNPG 328          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C16_ARATH (Protein phosphatase 2C 16 OS=Arabidopsis thaliana GN=HAB1 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.528e-28
Identity = 78/181 (43.09%), Postives = 105/181 (58.01%), Query Frame = -1
Query:  336 GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGG-FVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK-------------PIQ------DP--EEAAKRLMQEAYQRGSADNITCVVVRFLANQ 812
            GSTA  A++    ++V+N GDSRAV+ RG  A+ +S DHKPD+ DE  RIE+AGG  + W G  RV GVLA+SR+ GDR LK YV+ +PE+         E LILASDGLWDV+ N+E   + +             P+       DP  + AA  L   A Q+GS DNI+ +V+   A +
Sbjct:  326 GSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGA-RVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVIDLKAQR 505          
The following BLAST results are available for this feature:
BLAST of CX069514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
P2C24_ARATH7.713e-2945.03Probable protein phosphatase 2C 24 OS=Arabidopsis ... [more]
P2C06_ORYSJ7.713e-2939.05Probable protein phosphatase 2C 6 OS=Oryza sativa ... [more]
P2C47_ARATH1.007e-2841.27Probable protein phosphatase 2C 47 OS=Arabidopsis ... [more]
PP2C1_YEAST1.316e-2847.52Protein phosphatase 2C homolog 1 OS=Saccharomyces ... [more]
P2C47_ORYSJ1.316e-2839.08Probable protein phosphatase 2C 47 OS=Oryza sativa... [more]
P2C02_ORYSJ1.316e-2838.98Probable protein phosphatase 2C 2 OS=Oryza sativa ... [more]
P2C43_ARATH2.931e-2839.66Probable protein phosphatase 2C 43 OS=Arabidopsis ... [more]
PPM1F_HUMAN3.828e-2836.26Protein phosphatase 1F OS=Homo sapiens GN=PPM1F PE... [more]
PP2C1_SCHPO5.000e-2840.43Protein phosphatase 2C homolog 1 OS=Schizosaccharo... [more]
P2C16_ARATH8.528e-2843.09Protein phosphatase 2C 16 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_11A01_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11A01-B1-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069514 ID=CX069514; Name=CX069514; organism=Citrus sinensis; type=EST; length=884bp
TTTTTTTTTTTTTTTTCTTTTAGGAAATTGAAACTTTAGAAGTCTTTGCC
AATTCTTTACACATGCATACATACACATTTCTAGCTACATTTCGAGGACC
GAGAACAGATGTTAAACTTCGGACACATCTATTCCAGAGACTGATAATAC
GTAATACACATTAACGGCCGGGGTAAGCTTTTTGTTCATGTTCTATCATT
ACAAAGTACAACGAAACTGTAATTTTTCTATGACTACTAGCTGTAGACCA
CTGAAAGGATGCCCATGTAGAGAACAAAAGCAGAGCGGTGGCTATGAAAG
GATGTTCATGCAGAGCCAGGAAAGGATGAACCACCTTGATTGGCCAAGAA
CCGAACAACGACACAGGTGATGTTGTCTGCGCTGCCTCTCTGATATGCCT
CCTGCATCAGCCTCTTCGCTGCCTCCTCTGGATCCTGGATTGGTTTGATC
ATCGCAACAGCTTCCTCATTTGTGACGACATCCCAAAGTCCATCACTTGC
AAGGATAAGAAACTCAAGGGAGCTGTCAATAACTTCCTCCTGAATTTCGG
GATCAGCAACAACATACTGCTTCAAGAGTCTGTCACCAAATGCGCGAGAA
ACGGCAAGAACTCCTCCCACTCTCCAAGTTCCAGCCCACATCACAAACCC
TCCTGCATCCTCAATCCGTTGACGCTCATCTGTTTGGTCTGGTTTGTGAT
CTCGCGATACGGCAATAGCATTACCGCCCCTGCATATAACAGCTCTGGAG
TCACCCACATTTGCAACAAGTAAGCGATCACCAACAAGGATGGCAGTGGA
AGCAGTAGATCCAGCATCCCTGTTTTGATTGTTTTCTGACTTCAGAAATT
CCGAGTCTGTGTGGCTGTATGCATCAGCTATTGC
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