CX069514

Overview
NameCX069514
Unique NameCX069514
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7623 contig Csv1_Contig7623:203..1085. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C53_ORYSJ (Probable protein phosphatase 2C 53 OS=Oryza sativa subsp. japonica GN=Os05g0592800 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.114e-27
Identity = 78/184 (42.39%), Postives = 104/184 (56.52%), Query Frame = -1
Query:  336 GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEE-----------------AVAMIKPIQ------DP--EEAAKRLMQEAYQRGSADNITCVVVRFLANQ 812
            GSTA  A++    ++VAN GDSRAV+CRG   + +S DHKP++ DE  RIE  GG V+    +RV GVLA+SR+ GD+ LK Y++  PE+         + LILASDGLWDV++NEE                 A A     Q      DP  + AA  L + A Q+GS DNIT VV+   A++
Sbjct:  256 GSTAVVAVVCSSHVIVANCGDSRAVLCRGKQPLPLSLDHKPNREDEYARIEALGGKVIQWNGYRVLGVLAMSRSIGDKYLKPYIIPVPEVTVVARAKDDDCLILASDGLWDVMSNEEVCDAARKRILLWHKKNAATASTSSAQISGDSSDPAAQAAADYLSKLALQKGSKDNITVVVIDLKAHR 439          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C09_ORYSJ (Probable protein phosphatase 2C 9 OS=Oryza sativa subsp. japonica GN=Os01g0846300 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.114e-27
Identity = 68/124 (54.84%), Postives = 86/124 (69.35%), Query Frame = -1
Query:  444 AGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK 815
            AGSTA  A++   +++VAN GDSRAVI R G  +A+S DHKPD+ DE +RIE AGG V++    RV GVLA+SRA GD  LK YV ++PE+         E LILASDGLWDVVTNE A  +++
Sbjct:  212 AGSTAVVAVVSPTQVVVANAGDSRAVISRAGVPVALSVDHKPDRPDELERIEAAGGRVIYWDGARVLGVLAMSRAIGDGYLKPYVTSEPEVTVTERTDDDECLILASDGLWDVVTNEMACEVVR 335          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C27_ARATH (Probable protein phosphatase 2C 27 OS=Arabidopsis thaliana GN=At2g33700 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.900e-27
Identity = 76/189 (40.21%), Postives = 116/189 (61.38%), Query Frame = -1
Query:  348 AIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQ------YVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKP----IQDPEEAAKRLMQEAYQRGSADNITCVVVRF 884
            AI  A+   D EF   +++ +  +G+TA TA + G RL++AN GD RAV+ R G AI +S+DHKP+ T E+ RIE  GG V++ G   + G L+V+RA GD  +K        +  +PE+QE  +    EFLI+  DGLWDV++++ AV + +       DPE  ++ L++EA +R + DN+T +VV F
Sbjct:  160 AIKSAFLKADYEFA-DDSSLDISSGTTALTAFIFGRRLIIANAGDCRAVLGRRGRAIELSKDHKPNCTAEKVRIEKLGG-VVYDG--YLNGQLSVARAIGDWHMKGPKGSACPLSPEPELQETDLSEDDEFLIMGCDGLWDVMSSQCAVTIARKELMIHNDPERCSRELVREALKRNTCDNLTVIVVCF 344          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C49_ORYSJ (Probable protein phosphatase 2C 49 OS=Oryza sativa subsp. japonica GN=Os05g0457200 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.481e-27
Identity = 66/123 (53.66%), Postives = 86/123 (69.92%), Query Frame = -1
Query:  444 GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK 812
            GSTA  A++  +R++VAN GDSRAV+CR G  + +S DHKPD+ DE +RI+ AGG V++    RV GVLA+SRA GD  LK YV ++PE+         E LILASDGLWDVVTNE A  +++
Sbjct:  213 GSTAVVAVVGPNRVVVANSGDSRAVLCRAGVPVPLSVDHKPDRPDELERIKAAGGRVIYWDGARVLGVLAMSRAIGDGYLKPYVTSEPEVTVTERADDDECLILASDGLWDVVTNEMACEVVR 335          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C13_ARATH (Probable protein phosphatase 2C 13 OS=Arabidopsis thaliana GN=At1g48040 PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 3.241e-27
Identity = 75/178 (42.13%), Postives = 108/178 (60.67%), Query Frame = -1
Query:  312 GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK-------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKP----IQDPEEAAKRLMQEAYQRGSADNITCVVVRFLANQGGSSFPGS 812
            G+TA TA+++G  LLVAN GD RAV+CR G A+ +S DH+     ER+RIED GG+        + GVLAV+RA GD  LK         +++DPEI + ++    EFLILA DG+WDV++++ AV+ ++       DP + A  L +EA +  S+DN+T +V+ F      SS P S
Sbjct:  187 GTTALTALIIGRHLLVANAGDCRAVLCRRGVAVDMSFDHRSTYEPERRRIEDLGGYF---EDGYLNGVLAVTRAIGDWELKNPFTDSSSPLISDPEIGQIILTEDDEFLILACDGIWDVLSSQNAVSNVRQGLRRHGDPRQCAMELGKEAARLQSSDNMTVIVICF------SSVPSS 355          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: ILKAP_BOVIN (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Bos taurus GN=ILKAP PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.232e-27
Identity = 83/202 (41.09%), Postives = 114/202 (56.44%), Query Frame = -1
Query:  351 IADAYSHTDSEFLKSENNQNR--DAGSTASTAILVGDRLLVANVGDSRAVICRGGN------AIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQY-VVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI--------------KPIQDP--EEAAKRLMQEAYQRGSADNITCVVVR 881
            + D + HTD EFLK  ++Q      GSTA+  + V + L +AN+GDSRA++CR         A+++S++H P Q +ER RI+ AGG V      RV GVL VSR+ GD   K+  V + P+I+   +  +  F++LA DGL+ V T EEAV  I              KP  D   E A  RL  +A QRGSADN+T +VVR
Sbjct:  169 LLDTFKHTDEEFLKQASSQKPAWKDGSTATCVLAVDNTLYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQYEERMRIQKAGGNVR---DGRVLGVLEVSRSIGDGQYKRCGVTSVPDIRRCQLTPNDRFILLACDGLFKVFTPEEAVNFILSCLEDEKIQRREGKPTVDARYEAACNRLANKAVQRGSADNVTVMVVR 367          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C07_ARATH (Protein phosphatase 2C 7 OS=Arabidopsis thaliana GN=HAB2 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 5.528e-27
Identity = 75/181 (41.44%), Postives = 106/181 (58.56%), Query Frame = -1
Query:  336 GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGG-FVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK-------------PI--------QDPEEAAKRLMQEAYQRGSADNITCVVVRFLANQ 812
            GSTA  A++    ++V+N GDSRAV+ RG +++ +S DHKPD+ DE  RIE AGG  + W G  RV GVLA+SR+ GD+ L+ +V+ DPE+         E LILASDGLWDV++N+EA    +             P+        Q  + AA+ L + A Q GS DNI+ +V+   A +
Sbjct:  326 GSTAVVALVCSSHIIVSNCGDSRAVLLRGKDSMPLSVDHKPDREDEYARIEKAGGKVIQWQGA-RVSGVLAMSRSIGDQYLEPFVIPDPEVTFMPRAREDECLILASDGLWDVMSNQEACDFARRRILAWHKKNGALPLAERGVGEDQACQAAAEYLSKLAIQMGSKDNISIIVIDLKAQR 505          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PPM1F_RAT (Protein phosphatase 1F OS=Rattus norvegicus GN=Ppm1f PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.219e-27
Identity = 72/202 (35.64%), Postives = 107/202 (52.97%), Query Frame = -1
Query:  309 AIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI-----KPIQDPEEAAKRLMQEAYQRGSADNITCVVVRFLAN-----QGGSSFPGSA 884
            A+ +A+ HTD  FL+    +   +G+T   A++ G  L VA +GDS+ ++ + G  + +   HKP++ DE+ RIE  GGFV     WRV G LAVSRA GD   K YV  + +     +    ++L+LA DG +DVV + E   ++     +        A+ L+  A  RGS DNIT +VV FL +     +GG    G A
Sbjct:  226 ALKEAFRHTDQMFLQKAKRERLQSGTTGVCALITGAALHVAWLGDSQVILVQQGQVVKLMEPHKPERQDEKSRIEALGGFVSLMDCWRVNGTLAVSRAIGDVFQKPYVSGEADAASRELTGLEDYLLLACDGFFDVVPHHEIPGLVHGHLLRQKGSGMHVAEELVAVARDRGSHDNITVMVV-FLRDPLELLEGGGQGAGGA 426          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: ILKAP_RAT (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Rattus norvegicus GN=Ilkap PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.219e-27
Identity = 83/202 (41.09%), Postives = 114/202 (56.44%), Query Frame = -1
Query:  351 IADAYSHTDSEFLKSENNQNR--DAGSTASTAILVGDRLLVANVGDSRAVICRGGN------AIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQY-VVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI--------------KPIQDP--EEAAKRLMQEAYQRGSADNITCVVVR 881
            + D + HTD EFLK  ++Q      GSTA+  + V + L +AN+GDSRA++CR         A+++S++H P Q +ER RI+ AGG V      RV GVL VSR+ GD   K+  V + P+I+   +  +  F++LA DGL+ V T EEAV  I              KP  D   E A  RL  +A QRGSADN+T +VVR
Sbjct:  191 LLDTFKHTDEEFLKQASSQKPAWKDGSTATCVLAVDNILYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQYEERMRIQKAGGNVR---DGRVLGVLEVSRSIGDGQYKRCGVTSVPDIRRCQLTPNDRFILLACDGLFKVFTPEEAVNFILSCLEDEKIQTREGKPAVDARYEAACNRLANKAVQRGSADNVTVMVVR 389          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: ILKAP_MOUSE (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Mus musculus GN=Ilkap PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.219e-27
Identity = 83/202 (41.09%), Postives = 114/202 (56.44%), Query Frame = -1
Query:  351 IADAYSHTDSEFLKSENNQNR--DAGSTASTAILVGDRLLVANVGDSRAVICRGGN------AIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQY-VVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI--------------KPIQDP--EEAAKRLMQEAYQRGSADNITCVVVR 881
            + D + HTD EFLK  ++Q      GSTA+  + V + L +AN+GDSRA++CR         A+++S++H P Q +ER RI+ AGG V      RV GVL VSR+ GD   K+  V + P+I+   +  +  F++LA DGL+ V T EEAV  I              KP  D   E A  RL  +A QRGSADN+T +VVR
Sbjct:  191 LLDTFKHTDEEFLKQASSQKPAWKDGSTATCVLAVDNILYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQYEERMRIQKAGGNVR---DGRVLGVLEVSRSIGDGQYKRCGVTSVPDIRRCQLTPNDRFILLACDGLFKVFTPEEAVNFILSCLEDDKIQTREGKPAVDARYEAACNRLANKAVQRGSADNVTVMVVR 389          
The following BLAST results are available for this feature:
BLAST of CX069514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
P2C53_ORYSJ1.114e-2742.39Probable protein phosphatase 2C 53 OS=Oryza sativa... [more]
P2C09_ORYSJ1.114e-2754.84Probable protein phosphatase 2C 9 OS=Oryza sativa ... [more]
P2C27_ARATH1.900e-2740.21Probable protein phosphatase 2C 27 OS=Arabidopsis ... [more]
P2C49_ORYSJ2.481e-2753.66Probable protein phosphatase 2C 49 OS=Oryza sativa... [more]
P2C13_ARATH3.241e-2742.13Probable protein phosphatase 2C 13 OS=Arabidopsis ... [more]
ILKAP_BOVIN4.232e-2741.09Integrin-linked kinase-associated serine/threonine... [more]
P2C07_ARATH5.528e-2741.44Protein phosphatase 2C 7 OS=Arabidopsis thaliana G... [more]
PPM1F_RAT7.219e-2735.64Protein phosphatase 1F OS=Rattus norvegicus GN=Ppm... [more]
ILKAP_RAT7.219e-2741.09Integrin-linked kinase-associated serine/threonine... [more]
ILKAP_MOUSE7.219e-2741.09Integrin-linked kinase-associated serine/threonine... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_11A01_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11A01-B1-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069514 ID=CX069514; Name=CX069514; organism=Citrus sinensis; type=EST; length=884bp
TTTTTTTTTTTTTTTTCTTTTAGGAAATTGAAACTTTAGAAGTCTTTGCC
AATTCTTTACACATGCATACATACACATTTCTAGCTACATTTCGAGGACC
GAGAACAGATGTTAAACTTCGGACACATCTATTCCAGAGACTGATAATAC
GTAATACACATTAACGGCCGGGGTAAGCTTTTTGTTCATGTTCTATCATT
ACAAAGTACAACGAAACTGTAATTTTTCTATGACTACTAGCTGTAGACCA
CTGAAAGGATGCCCATGTAGAGAACAAAAGCAGAGCGGTGGCTATGAAAG
GATGTTCATGCAGAGCCAGGAAAGGATGAACCACCTTGATTGGCCAAGAA
CCGAACAACGACACAGGTGATGTTGTCTGCGCTGCCTCTCTGATATGCCT
CCTGCATCAGCCTCTTCGCTGCCTCCTCTGGATCCTGGATTGGTTTGATC
ATCGCAACAGCTTCCTCATTTGTGACGACATCCCAAAGTCCATCACTTGC
AAGGATAAGAAACTCAAGGGAGCTGTCAATAACTTCCTCCTGAATTTCGG
GATCAGCAACAACATACTGCTTCAAGAGTCTGTCACCAAATGCGCGAGAA
ACGGCAAGAACTCCTCCCACTCTCCAAGTTCCAGCCCACATCACAAACCC
TCCTGCATCCTCAATCCGTTGACGCTCATCTGTTTGGTCTGGTTTGTGAT
CTCGCGATACGGCAATAGCATTACCGCCCCTGCATATAACAGCTCTGGAG
TCACCCACATTTGCAACAAGTAAGCGATCACCAACAAGGATGGCAGTGGA
AGCAGTAGATCCAGCATCCCTGTTTTGATTGTTTTCTGACTTCAGAAATT
CCGAGTCTGTGTGGCTGTATGCATCAGCTATTGC
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