CX069501
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069501 vs. ExPASy Swiss-Prot
Match: NU6C_SACHY (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Saccharum hybrid GN=ndhG PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 3.248e-56 Identity = 111/159 (69.81%), Postives = 126/159 (79.25%), Query Frame = -3 Query: 343 MDLPGPIHDFXXXXXXXXXXXXXXXXXLFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819 MDLPGPIH+ L TNPIYSAFSLGLVLVCISLFY L NS+FVA AQLLIYVGA+NVLIIFAVMF+NGS++SKD N WTIGDG T L+C +I FSL+TTI DTSWYGI+WTTR+NQI+EQ LI+N QQIGIHL+TDF+LPFE Sbjct: 1 MDLPGPIHEILVLFGGFVLLLGGLGVVLLTNPIYSAFSLGLVLVCISLFYFLLNSYFVAVAQLLIYVGAINVLIIFAVMFVNGSEWSKD--KNYWTIGDGFTLLLCITIPFSLMTTIPDTSWYGILWTTRSNQIVEQGLINNVQQIGIHLATDFYLPFE 157
BLAST of CX069501 vs. ExPASy Swiss-Prot
Match: NU6C_MAIZE (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Zea mays GN=ndhG PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 3.248e-56 Identity = 111/159 (69.81%), Postives = 126/159 (79.25%), Query Frame = -3 Query: 343 MDLPGPIHDFXXXXXXXXXXXXXXXXXLFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819 MDLPGPIH+ L TNPIYSAFSLGLVLVCISLFY L NS+FVA AQLLIYVGA+NVLIIFAVMF+NGS++SKD N WTIGDG T L+C +I FSL+TTI DTSWYGI+WTTR+NQI+EQ LI+N QQIGIHL+TDF+LPFE Sbjct: 1 MDLPGPIHEILVLFGGFGLLLGGLGVVLLTNPIYSAFSLGLVLVCISLFYFLLNSYFVAVAQLLIYVGAINVLIIFAVMFVNGSEWSKD--KNYWTIGDGFTLLLCITIPFSLMTTIPDTSWYGILWTTRSNQIVEQGLINNVQQIGIHLATDFYLPFE 157
BLAST of CX069501 vs. ExPASy Swiss-Prot
Match: NU6C_CYCTA (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Cycas taitungensis GN=ndhG PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.158e-45 Identity = 99/159 (62.26%), Postives = 113/159 (71.07%), Query Frame = -3 Query: 343 MDLPGPIHDFXXXXXXXXXXXXXXXXXLFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819 MDLPGPI D L TN IYSA SLG VLVCISL YIL N+ FVAAAQ+LIYVGAVNVLI+FAVM MN Y + LWT+GDG+T +VCTS+F SLIT IL+TSW I TT++NQI+EQDL +N Q+IG HLSTDFFLPFE Sbjct: 1 MDLPGPIRDILLVPLELGLILGGLEVVLLTNIIYSALSLGPVLVCISLLYILLNADFVAAAQILIYVGAVNVLIVFAVMLMNNQKYPNF--VPLWTVGDGITLVVCTSLFCSLITIILNTSWSEISMTTKSNQILEQDLTNNVQRIGAHLSTDFFLPFE 157
BLAST of CX069501 vs. ExPASy Swiss-Prot
Match: NU6C_CRYJA (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Cryptomeria japonica GN=ndhG PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 5.566e-40 Identity = 85/159 (53.46%), Postives = 109/159 (68.55%), Query Frame = -3 Query: 343 MDLPGPIHDFXXXXXXXXXXXXXXXXXLFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819 M+ P I+D L TN IYSA SLGLVL+CIS FYI+ N+ FVA AQ+LIY+GAVN+LI+FAVM MN Y WT+GD ++S+VCTS+F SLIT IL+ SW+GI T +++Q++E+DL +N Q+IG HLSTDFFLPFE Sbjct: 1 MNRPESIYDLLLAPLTLSLIFGGIGVVLLTNIIYSALSLGLVLICISFFYIILNADFVAVAQILIYIGAVNILILFAVMLMNNPKYPN--YAPPWTVGDSISSIVCTSLFCSLITIILNISWFGISLTQKSDQMLERDLTNNIQRIGAHLSTDFFLPFE 157
BLAST of CX069501 vs. ExPASy Swiss-Prot
Match: NU6C_HUPLU (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Huperzia lucidula GN=ndhG PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.061e-30 Identity = 70/131 (53.44%), Postives = 85/131 (64.89%), Query Frame = -3 Query: 343 FTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 735 FTN +YSAF LG V VCIS YIL N+ FVAA Q+LIYVG +NVLI+FAVM +N Y + L WT+GDG +CTS F S+I IL T W I +N+I+E+ L N Q+IG H TD LPFE Sbjct: 32 FTNIVYSAFLLGWVPVCISFLYILLNADFVAAVQILIYVGTINVLIVFAVMLINKPQYFR--FLKYWTVGDGTALALCTSPFLSIIAAILSTPWSKISLIVLSNKIVEEPLTDNVQRIGFHSLTDSPLPFE 160
BLAST of CX069501 vs. ExPASy Swiss-Prot
Match: NU6C_MARPO (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Marchantia polymorpha GN=ndhG PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.998e-30 Identity = 72/131 (54.96%), Postives = 89/131 (67.94%), Query Frame = -3 Query: 343 TNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNS-QQIGIHLSTDFFLPFE 732 TN +YSA LG V VCISL Y+L N+ FVAAAQ+LIYVGAVNVLIIFAVM +N YS F WTIGDG+T +CTSIF L I +TSW I T+ N +++ ++ N+ + IG L T+F LPFE Sbjct: 30 TNIVYSALFLGFVFVCISLLYLLLNADFVAAAQILIYVGAVNVLIIFAVMLINKKQYSNFFV--YWTIGDGITLTLCTSIFLLLNNFISNTSWSKIFLMTKPNLVVKDIILINTVRHIGSELLTEFLLPFE 158
BLAST of CX069501 vs. ExPASy Swiss-Prot
Match: NU6C_PHYPA (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Physcomitrella patens GN=ndhG PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 8.907e-30 Identity = 72/161 (44.72%), Postives = 95/161 (59.01%), Query Frame = -3 Query: 343 NIMDLPGPIHDFXXXXXXXXXXXXXXXXXLFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 825 NI++L GP+ + L +N +YSAF LGLV CISL Y N+ FVAAAQ+LIYVGAVNVLI+FAVM +N + K F +WT+GD +T +C + FF L+ IL+TSW I T + +E + N Q+IG L T + LPFE Sbjct: 2 NIIELFGPLQEIIFFILEIGVILGSLGVVLLSNIVYSAFFLGLVFFCISLLYFALNADFVAAAQILIYVGAVNVLIVFAVMLINKPESLKIFP--VWTVGDKITLAICLTSFFLLVNIILNTSWSNITVITESKGFLESNFTQNVQRIGSLLLTQYLLPFE 160
BLAST of CX069501 vs. ExPASy Swiss-Prot
Match: NU6C_ANTFO (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Anthoceros formosae GN=ndhG PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.163e-29 Identity = 72/130 (55.38%), Postives = 90/130 (69.23%), Query Frame = -3 Query: 343 TNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 732 TN +YSAF LGLV VCIS Y+L ++ FVA AQ+LIYVGAVN+LI+FAVM +N S F L WT+GD +T ++CTS+FF LI+ IL SW I ++N+I EQ L S+ Q IG L DF LPFE Sbjct: 33 TNIVYSAFLLGLVFVCISFLYLLLDADFVATAQILIYVGAVNILIVFAVMLIN-KPQSLQF-LPSWTVGDTITLILCTSLFFLLISMILSISWSNIFSIAQSNKIGEQVLKSSVQGIGSSLLIDFLLPFE 160
BLAST of CX069501 vs. ExPASy Swiss-Prot
Match: NU6C_ANGEV (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Angiopteris evecta GN=ndhG PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.057e-27 Identity = 73/160 (45.62%), Postives = 92/160 (57.50%), Query Frame = -3 Query: 343 MDLPGPIHDFXXXXXXXXXXXXXXXXXLFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQL-NLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819 M LP PIH L TN +YSA LGLV +CISL Y++ N+ FVAAAQ+LIYVGAVNVL +FAVM + D K+ L + +GD +T VCTS+F L I D SW I T ++ + +EQ L ++ Q IG L T F LPFE Sbjct: 1 MILPEPIHKVILVIIELGILLGSLGVVLLTNIVYSALLLGLVFICISLLYLVLNADFVAAAQVLIYVGAVNVLTVFAVMLI---DKPKNITLFSFSNVGDNITLGVCTSLFILLTIMIPDASWSEIYMTKQSTKFVEQGLTTDVQLIGSQLLTKFLLPFE 157
BLAST of CX069501 vs. ExPASy Swiss-Prot
Match: NU6C_PSINU (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Psilotum nudum GN=ndhG PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.331e-25 Identity = 63/127 (49.61%), Postives = 86/127 (67.72%), Query Frame = -3 Query: 343 IYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 723 + SAFSLGL + ISL Y++ N+ FVAAAQ+LIYVGA+NVLI+F+VM + ++D + T G+ +T +VCTS+F L++ ILDTSW I ++ +I E L SN Q IG L T+F LPFE Sbjct: 33 VQSAFSLGLTFISISLLYLVLNADFVAAAQVLIYVGAINVLIVFSVMLIQKPHKNEDLSTSRNT-GNNITLIVCTSLFLFLVSIILDTSWSQIYSIKKSTKIFEPILKSNVQLIGSQLLTEFLLPFE 158 The following BLAST results are available for this feature:
BLAST of CX069501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 102
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069501 ID=CX069501; Name=CX069501; organism=Citrus sinensis; type=EST; length=872bpback to top |