CX069492

Overview
NameCX069492
Unique NameCX069492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2633 contig Csv1_Contig2633:97..929. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_THEM4 (Phosphoglycerate kinase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=pgk PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.247e-59
Identity = 113/200 (56.50%), Postives = 144/200 (72.00%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPAT-AIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            G+KVS KI VI +LL K D +L+GG M+FTF KA G +VGSSLVEEDKLDLA  ++E+AK KGV  +LP D V A K  +   +K       IP+GWMGLD+GP++IK F E +   KTI+WNGPMGVFE + F  GT+ +A  +A  + KG TT+IGGGDS AA+ K  L +K+SH+STGGGASLE LEGK LPG+ ++
Sbjct:  195 GAKVSDKIGVITNLLNKADKILIGGAMMFTFLKALGKNVGSSLVEEDKLDLAKRILEEAKEKGVEFVLPVDAVCAQKIESGVETKTFRINDGIPEGWMGLDIGPESIKLFKEKISGAKTIVWNGPMGVFEIEDFETGTKEVAISIAAETEKGATTVIGGGDSAAAIAKFNLKNKVSHVSTGGGASLEFLEGKELPGIASI 394          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_FERNB (Phosphoglycerate kinase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=pgk PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.934e-59
Identity = 112/202 (55.45%), Postives = 145/202 (71.78%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPAT-AIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI VI +LL K D +++GG M+FTF++A G   G+SLVEEDK+DLA  L+E+AK KGV L++PTD V A K  A    KV      IP+GW G D+GP +I+     L   KTI+WNGP+GVFE + FA GT+A+A+ +A L+ KGVTT++GGGDS AAV + GL  K SH+STGGGASLE LEGK LPG+ ++ D
Sbjct:  195 GAKVSDKIGVITNLLNKADKIIIGGAMMFTFWRALGKQTGNSLVEEDKIDLAKQLLEQAKEKGVELVIPTDAVCAQKMEAGVEKKVFTCEEGIPEGWAGYDIGPASIELIKSKLADAKTIVWNGPLGVFEIEDFANGTKAVAEFIASLTDKGVTTVVGGGDSAAAVSQFGLEKKFSHVSTGGGASLEFLEGKELPGIASIAD 396          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_CLOPS (Phosphoglycerate kinase OS=Clostridium perfringens (strain SM101 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.934e-59
Identity = 119/201 (59.20%), Postives = 147/201 (73.13%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI VI +LLEKVD L++GGGM +TF KAQG++VGSSLVEEDK++ A  ++ KA+ KGV LLLP D  +A +F  D  + V     I +G+MGLD+GP     ++EA+   KT+IWNGPMGVFEF+ F  GT A+AK +AE      TTIIGGGDS AAV  +G  DKMSHISTGGGASLE LEGK LPG+ AL+D
Sbjct:  200 GAKVSDKINVINNLLEKVDTLIIGGGMAYTFLKAQGYTVGSSLVEEDKVEYAKEMLAKAEEKGVKLLLPVDHRVAKEF-KDVEAVVTEDQNIAEGFMGLDIGPKTEAIYAEAIKDAKTVIWNGPMGVFEFENFNKGTIAVAKAMAEAD---ATTIIGGGDSAAAVNILGFGDKMSHISTGGGASLEFLEGKVLPGIAALND 396          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_CLOPE (Phosphoglycerate kinase OS=Clostridium perfringens GN=pgk PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.934e-59
Identity = 119/201 (59.20%), Postives = 147/201 (73.13%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI VI +LLEKVD L++GGGM +TF KAQG++VGSSLVEEDK++ A  ++ KA+ KGV LLLP D  +A +F  D  + V     I +G+MGLD+GP     ++EA+   KT+IWNGPMGVFEF+ F  GT A+AK +AE      TTIIGGGDS AAV  +G  DKMSHISTGGGASLE LEGK LPG+ AL+D
Sbjct:  200 GAKVSDKINVINNLLEKVDTLIIGGGMAYTFLKAQGYTVGSSLVEEDKVEYAKEMLAKAEEKGVKLLLPVDHRVAKEF-KDVEAVVTEDQNIAEGFMGLDIGPKTEAIYAEAIKDAKTVIWNGPMGVFEFENFNKGTIAVAKAMAEAD---ATTIIGGGDSAAAVNILGFGDKMSHISTGGGASLEFLEGKVLPGIAALND 396          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_CLOP1 (Phosphoglycerate kinase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.934e-59
Identity = 119/201 (59.20%), Postives = 147/201 (73.13%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI VI +LLEKVD L++GGGM +TF KAQG++VGSSLVEEDK++ A  ++ KA+ KGV LLLP D  +A +F  D  + V     I +G+MGLD+GP     ++EA+   KT+IWNGPMGVFEF+ F  GT A+AK +AE      TTIIGGGDS AAV  +G  DKMSHISTGGGASLE LEGK LPG+ AL+D
Sbjct:  200 GAKVSDKINVINNLLEKVDTLIIGGGMAYTFLKAQGYTVGSSLVEEDKVEYAKEMLAKAEEKGVKLLLPVDHRVAKEF-KDVEAVVTEDQNIAEGFMGLDIGPKTEAIYAEAIKDAKTVIWNGPMGVFEFENFNKGTIAVAKAMAEAD---ATTIIGGGDSAAAVNILGFGDKMSHISTGGGASLEFLEGKVLPGIAALND 396          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_CLOK5 (Phosphoglycerate kinase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=pgk PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.934e-59
Identity = 113/201 (56.22%), Postives = 149/201 (74.13%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G KVS KI VI +LLEKVD L++GGGM +TF +AQG+++G+S+VEEDK++ A  +++KAK KG+ LLLP D V+ DKF   A   +     I DG+MG+D+GP   K +++A+  +KTIIWNGPMGVFEF  FA GT A+AK +AE    G  TIIGGGDS AA+ ++G  DKM+HISTGGGASLE L G+ LPG+ AL++
Sbjct:  200 GVKVSDKINVINNLLEKVDTLIIGGGMSYTFARAQGYTIGTSVVEEDKIEYAKEMIDKAKEKGIKLLLPIDRVVTDKFDESAEPILEDDKNIKDGYMGMDIGPKTAKVYADAIKDSKTIIWNGPMGVFEFKNFAKGTFAVAKAMAE---SGAITIIGGGDSAAAINQLGFGDKMTHISTGGGASLEFLGGEELPGISALNN 397          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_CLOK1 (Phosphoglycerate kinase OS=Clostridium kluyveri (strain NBRC 12016) GN=pgk PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.934e-59
Identity = 113/201 (56.22%), Postives = 149/201 (74.13%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G KVS KI VI +LLEKVD L++GGGM +TF +AQG+++G+S+VEEDK++ A  +++KAK KG+ LLLP D V+ DKF   A   +     I DG+MG+D+GP   K +++A+  +KTIIWNGPMGVFEF  FA GT A+AK +AE    G  TIIGGGDS AA+ ++G  DKM+HISTGGGASLE L G+ LPG+ AL++
Sbjct:  200 GVKVSDKINVINNLLEKVDTLIIGGGMSYTFARAQGYTIGTSVVEEDKIEYAKEMIDKAKEKGIKLLLPIDRVVTDKFDESAEPILEDDKNIKDGYMGMDIGPKTAKVYADAIKDSKTIIWNGPMGVFEFKNFAKGTFAVAKAMAE---SGAITIIGGGDSAAAINQLGFGDKMTHISTGGGASLEFLGGEELPGISALNN 397          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_PELLD (Phosphoglycerate kinase OS=Pelodictyon luteolum (strain DSM 273) GN=pgk PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.456e-58
Identity = 113/200 (56.50%), Postives = 145/200 (72.50%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSK+S KI VI++L  KVD +L+GG M+FTF+KAQG   G SLVE++K +LA  L+ KAKS GV L+LP DV+ A + + DA    V    + +  MG+D+GP   +++ + +   KT++WNGPMGVFE D FA GT A+A+ LA  + KG TTIIGGGDS AAV K GLADKM+HISTGGGASLE LEGK LPG+ AL+
Sbjct:  197 GSKISGKIDVIDNLFSKVDTVLVGGAMVFTFFKAQGLETGRSLVEDNKTELALELLAKAKSMGVRLILPEDVMAAPEISPDAPFHAVSVDQLAENEMGVDIGPKTAETYRKEILGAKTVLWNGPMGVFEIDNFAGGTIAVAEALAAATAKGATTIIGGGDSAAAVAKAGLADKMTHISTGGGASLEFLEGKELPGIAALN 396          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_CARHZ (Phosphoglycerate kinase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=pgk PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.902e-58
Identity = 118/201 (58.71%), Postives = 145/201 (72.14%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI VIE+LL KVD+LL+GGGM  TF KA G+  G SLVEEDK++LA  LM KAK  GV LLLP+DVV+A +  A   SK+V   +IP   M LD+G    K F E +   KT++WNGPMGVFE + F  GT A+A+ +AE    G  +++GGGDSVAAVEK G+ADK++HISTGGGASLE LEGK LPGV  L+D
Sbjct:  196 GAKVSDKIGVIENLLGKVDVLLIGGGMANTFLKAMGYETGKSLVEEDKVNLAGELMNKAKEVGVKLLLPSDVVVAPRIEAGVPSKIVAVDSIPAEEMALDIGEKTAKHFREEILKAKTVVWNGPMGVFEVEPFDRGTVAVAEAVAE---SGALSVVGGGDSVAAVEKAGVADKITHISTGGGASLEFLEGKKLPGVEVLND 393          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_TREDE (Phosphoglycerate kinase OS=Treponema denticola GN=pgk PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.484e-58
Identity = 107/200 (53.50%), Postives = 148/200 (74.00%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            G+KVS+KI V+ESLL+    L++GGGM +TF K QG  +G SL EED +D A +L++KA+ +GV ++LP D + ++ F+ +A + +V +T IPD  MG+DVGP  +  + E + ++K+I+WNGP+GVFEF+ F+ GTE  A+ +A  + KG  TI+GGGDSVAAV K  LADKMSH+STGGGASLE LEGK LPG+  LD
Sbjct:  218 GAKVSSKIAVLESLLKNASSLIIGGGMAYTFLKVQGKKIGKSLFEEDFMDTAKNLLDKAEKQGVKIILPVDHICSETFSPNAEAVLVESTDIPDNLMGMDVGPKTLALYKEIILSSKSIVWNGPVGVFEFEAFSKGTEETARLVAAATEKGALTIVGGGDSVAAVNKFNLADKMSHVSTGGGASLEFLEGKVLPGIACLD 417          
The following BLAST results are available for this feature:
BLAST of CX069492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_THEM42.247e-5956.50Phosphoglycerate kinase OS=Thermosipho melanesiens... [more]
PGK_FERNB2.934e-5955.45Phosphoglycerate kinase OS=Fervidobacterium nodosu... [more]
PGK_CLOPS2.934e-5959.20Phosphoglycerate kinase OS=Clostridium perfringens... [more]
PGK_CLOPE2.934e-5959.20Phosphoglycerate kinase OS=Clostridium perfringens... [more]
PGK_CLOP12.934e-5959.20Phosphoglycerate kinase OS=Clostridium perfringens... [more]
PGK_CLOK52.934e-5956.22Phosphoglycerate kinase OS=Clostridium kluyveri (s... [more]
PGK_CLOK12.934e-5956.22Phosphoglycerate kinase OS=Clostridium kluyveri (s... [more]
PGK_PELLD1.456e-5856.50Phosphoglycerate kinase OS=Pelodictyon luteolum (s... [more]
PGK_CARHZ1.902e-5858.71Phosphoglycerate kinase OS=Carboxydothermus hydrog... [more]
PGK_TREDE2.484e-5853.50Phosphoglycerate kinase OS=Treponema denticola GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10G07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10G07-M14-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069492 ID=CX069492; Name=CX069492; organism=Citrus sinensis; type=EST; length=832bp
GAAACTTATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAG
AAAAATGCATCACCATTGATGCCTGTGAGAAAGAATTTATTTTTACTCTT
ACAGCATCTACAAAACCAACTCTAATGATAAAGTTTAACTTTATCCACTC
TGGGCTGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAA
AAGGAAAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCA
GGGAGTGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGA
GATATGGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTG
AGTCACCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCA
AGCTTCTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCAAA
CACACCCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTT
CACTGAATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAACCA
TCTGGAATTGCCGTTGCTGGCACCACCTTGCTGTTGGCATCAGCAGCAAA
CTTGTCAGCAATAACAACATCAGTAGGGAGCAGAAGAGACACCCCTTTAG
ATTTGGCCTTCTCCATAAGTGACGTAGCGAGATCAAGCTTGTCTTCCTCA
ACAAGGGATGAACCAACAGAGTGTCCTTGGGCCTTGTAAAAGGTAAAGAT
CATTCCTCCACCGAGCAATAGAATGTCAACCTTCTCCAAAAGTGATTCAA
TAACACGGATCTTAGTTGACACCTTTGAACCA
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