CX069492

Overview
NameCX069492
Unique NameCX069492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2633 contig Csv1_Contig2633:97..929. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_CLOBM (Phosphoglycerate kinase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=pgk PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.484e-58
Identity = 113/201 (56.22%), Postives = 145/201 (72.14%), Query Frame = -2 
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI VI +LL+KVD L++GGGM +TF K+ G++VG SL+EEDK++ A  ++ KAK KGV+ LLP D+ IAD+F  DA   V     + +G+MGLD+G    K +++A+ + KT+IWNGPMGVFEF  FA GT  +AK +A+       TIIGGGDS AAV   G  DKMSHISTGGGASLE LEGK LPG+ AL+D
Sbjct:  200 GAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKSLGYTVGDSLLEEDKVEYAKEMINKAKEKGVNFLLPVDITIADRFDKDAEPIVTEDQNVKEGYMGLDIGSKTAKIYADAIKSAKTVIWNGPMGVFEFKNFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNIFGFGDKMSHISTGGGASLEFLEGKELPGIAALND 397
[Close]
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_BACCZ (Phosphoglycerate kinase OS=Bacillus cereus (strain ZK / E33L) GN=pgk PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.484e-58
Identity = 107/201 (53.23%), Postives = 147/201 (73.13%), Query Frame = -2 
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KV  KI VI  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++LA   M+ AK KGV+  +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  195 GAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATTKIVGIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393
[Close]
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_BACC3 (Phosphoglycerate kinase OS=Bacillus cereus (strain 03BB102) GN=pgk PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.484e-58
Identity = 107/201 (53.23%), Postives = 147/201 (73.13%), Query Frame = -2 
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KV  KI VI  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++LA   M+ AK KGV+  +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  195 GAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATTKIVGIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393
[Close]
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_BACC1 (Phosphoglycerate kinase OS=Bacillus cereus (strain ATCC 10987) GN=pgk PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.484e-58
Identity = 107/201 (53.23%), Postives = 147/201 (73.13%), Query Frame = -2 
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KV  KI VI  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++LA   M+ AK KGV+  +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  195 GAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATTKIVNIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393
[Close]
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_BACC0 (Phosphoglycerate kinase OS=Bacillus cereus (strain AH820) GN=pgk PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.484e-58
Identity = 107/201 (53.23%), Postives = 147/201 (73.13%), Query Frame = -2 
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KV  KI VI  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++LA   M+ AK KGV+  +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  195 GAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATTKIVGIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393
[Close]
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_BACAH (Phosphoglycerate kinase OS=Bacillus thuringiensis (strain Al Hakam) GN=pgk PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.484e-58
Identity = 107/201 (53.23%), Postives = 147/201 (73.13%), Query Frame = -2 
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KV  KI VI  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++LA   M+ AK KGV+  +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  195 GAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATTKIVGIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393
[Close]
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_RHOE4 (Phosphoglycerate kinase OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=pgk PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.534e-58
Identity = 110/201 (54.73%), Postives = 145/201 (72.14%), Query Frame = -2 
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADK-MSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVS K+ VIE+L  KVD L++GGGM +TF  AQG SVG+SL EE  ++    L+++       + +P DVV+AD F+ADA SK+VP   IPDGWMGLD+GP+++K F+  L   KT+ WNGPMGVFEF KF AGT  +A+ + E + KG  +++GGGDS AAV ++G+ D+  SHISTGGGASLE LEGK LPG+  L+
Sbjct:  205 GSKVSDKLAVIEALAPKVDTLVIGGGMFYTFLAAQGVSVGNSLCEESMIETCKGLLDRYADV---IHIPQDVVVADSFSADAESKIVPFDKIPDGWMGLDIGPESVKRFAAILTGAKTVFWNGPMGVFEFPKFEAGTRGVAEAIVEATEKGAFSVVGGGDSAAAVRQLGIPDEGFSHISTGGGASLEYLEGKELPGIAVLE 402
[Close]
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_BACHK (Phosphoglycerate kinase OS=Bacillus thuringiensis subsp. konkukian GN=pgk PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.534e-58
Identity = 106/201 (52.74%), Postives = 147/201 (73.13%), Query Frame = -2 
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KV  KI VI  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++LA   M+ AK KGV+  +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   F+ GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  195 GAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATTKIVGIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFSQGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393
[Close]
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_BACCQ (Phosphoglycerate kinase OS=Bacillus cereus (strain Q1) GN=pgk PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.534e-58
Identity = 106/201 (52.74%), Postives = 147/201 (73.13%), Query Frame = -2 
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KV  KI VI  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++LA   M+ AK KGV+  +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   F+ GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  195 GAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATTKIVGIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFSQGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393
[Close]
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_BACC7 (Phosphoglycerate kinase OS=Bacillus cereus (strain AH187) GN=pgk PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.534e-58
Identity = 106/201 (52.74%), Postives = 147/201 (73.13%), Query Frame = -2 
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KV  KI VI  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++LA   M+ AK KGV+  +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   F+ GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  195 GAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATTKIVNIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFSQGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393
The following BLAST results are available for this feature:
BLAST of CX069492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_CLOBM2.484e-5856.22Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_BACCZ2.484e-5853.23Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACC32.484e-5853.23Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACC12.484e-5853.23Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACC02.484e-5853.23Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACAH2.484e-5853.23Phosphoglycerate kinase OS=Bacillus thuringiensis ... [more]
PGK_RHOE45.534e-5854.73Phosphoglycerate kinase OS=Rhodococcus erythropoli... [more]
PGK_BACHK5.534e-5852.74Phosphoglycerate kinase OS=Bacillus thuringiensis ... [more]
PGK_BACCQ5.534e-5852.74Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACC75.534e-5852.74Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10G07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10G07-M14-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069492 ID=CX069492; Name=CX069492; organism=Citrus sinensis; type=EST; length=832bp
GAAACTTATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAG
AAAAATGCATCACCATTGATGCCTGTGAGAAAGAATTTATTTTTACTCTT
ACAGCATCTACAAAACCAACTCTAATGATAAAGTTTAACTTTATCCACTC
TGGGCTGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAA
AAGGAAAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCA
GGGAGTGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGA
GATATGGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTG
AGTCACCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCA
AGCTTCTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCAAA
CACACCCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTT
CACTGAATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAACCA
TCTGGAATTGCCGTTGCTGGCACCACCTTGCTGTTGGCATCAGCAGCAAA
CTTGTCAGCAATAACAACATCAGTAGGGAGCAGAAGAGACACCCCTTTAG
ATTTGGCCTTCTCCATAAGTGACGTAGCGAGATCAAGCTTGTCTTCCTCA
ACAAGGGATGAACCAACAGAGTGTCCTTGGGCCTTGTAAAAGGTAAAGAT
CATTCCTCCACCGAGCAATAGAATGTCAACCTTCTCCAAAAGTGATTCAA
TAACACGGATCTTAGTTGACACCTTTGAACCA
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