CX069492

Overview
NameCX069492
Unique NameCX069492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2633 contig Csv1_Contig2633:97..929. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_LACBA (Phosphoglycerate kinase OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=pgk PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 3.037e-56
Identity = 111/201 (55.22%), Postives = 145/201 (72.14%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI VI++LL K D +L+GGGM +TFY A+G  +G+SLVE DK+DLA  +++KA  K   L+LP D V+A+KF  DA  K V    +PDG+M LD+GP ++  F + L   KT++WNGPMGVFE   +A GT  I K L  L+     TI+GGGDS AAV+++G+ADK+SHISTGGGASLE LEGKTLPG+ A+ D
Sbjct:  205 GAKVSDKIGVIDNLLAKADKILIGGGMTYTFYAAKGMKIGNSLVETDKIDLAKEILDKAGDK---LVLPVDSVVAEKFDNDAPHKTVEGD-VPDGYMALDIGPKSVAEFKDVLKDAKTVVWNGPMGVFEMSNYAEGTLEIGKFLGTLTN--AKTIVGGGDSTAAVQQLGVADKLSHISTGGGASLEYLEGKTLPGIAAISD 399          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_CORJK (Phosphoglycerate kinase OS=Corynebacterium jeikeium (strain K411) GN=pgk PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 3.037e-56
Identity = 106/201 (52.74%), Postives = 146/201 (72.64%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADK-MSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVS K+ VIE+L  +VD L++GGGM FTF  A+G+ VG SL++ED +D    L+E+    G  + LPTDVV+A++F  DA+ + V   +IP+GWMGLD+GP+++K+F+E L  +KT+ WNGPMGVFEF  FA GT  +A+ + + +  G  +++GGGDS AAV  +GL ++  SHISTGGGASLE LEGK LPGV  L+
Sbjct:  205 GSKVSDKLGVIEALAPRVDNLIIGGGMCFTFLAAKGYEVGGSLLQEDMIDTCKDLLERF---GDVIALPTDVVVAERFDKDADHRTVDLNSIPEGWMGLDIGPESVKAFAEVLSKSKTVFWNGPMGVFEFPAFAEGTRGVAQAIIDATAAGAFSVVGGGDSAAAVRTLGLNEEGFSHISTGGGASLEFLEGKELPGVSVLE 402          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_MYCS2 (Phosphoglycerate kinase OS=Mycobacterium smegmatis GN=pgk PE=1 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.966e-56
Identity = 110/201 (54.73%), Postives = 144/201 (71.64%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGL-ADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVS K+ VIE+L  K D L++GGGM FTF  AQG SVGSSL++E+ +D    L+++       + LP D+V+ADKFAADA ++ V A  IPDG MGLD+GP +++ F+  L   KT+ WNGPMGVFEF  FAAGT+ +A+ +   +GKG  +++GGGDS AAV ++GL  D  SHISTGGGASLE LEGK LPG+  L+
Sbjct:  210 GSKVSDKLAVIENLATKADSLIIGGGMCFTFLAAQGFSVGSSLLQEEMVDTCRRLLDEYADV---IHLPVDIVVADKFAADAEAETVAADRIPDGKMGLDIGPGSVERFTALLSNAKTVFWNGPMGVFEFPAFAAGTKGVAEAIIGATGKGAFSVVGGGDSAAAVRRLGLPEDGFSHISTGGGASLEYLEGKELPGIQVLE 407          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_LACPL (Phosphoglycerate kinase OS=Lactobacillus plantarum GN=pgk PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.966e-56
Identity = 110/201 (54.73%), Postives = 149/201 (74.13%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI VI+ L+ K D +++GGGM +TFY A+G  +G+SLVE+DK++LA S++EKA  K   L+LP+D ++A+KF  D  SKVV  + IPDG+M LD+GP +I+ F + L   KT++WNGPMGVFE   +A GT  I K L  LS    TTI+GGGDS AAV+++G+ DK++HISTGGGASLE LEGK LPG+ A+ +
Sbjct:  205 GAKVSDKIGVIDHLISKADKIIIGGGMTYTFYAAKGMGIGNSLVEKDKIELAKSIIEKAGDK---LVLPSDSIVAEKFDNDVPSKVVEGS-IPDGYMALDIGPKSIEEFEDVLRDAKTVVWNGPMGVFEMSNYAKGTLEIGKFLGTLSD--ATTIVGGGDSTAAVKQLGVGDKLTHISTGGGASLEYLEGKELPGIAAISE 399          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_GEOLS (Phosphoglycerate kinase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=pgk PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.180e-56
Identity = 110/200 (55.00%), Postives = 142/200 (71.00%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            G+KVS K+ V+E+L+ KVD +++GGGM FTF KA G+ VG SLVE++ +  A  +M+KAK KGV+  LP D V+A+ F A+A + V     IP+GWM LD+GP +   F+E L   KT+IWNGPMGVFE D F  GT A+A+ +        TT+IGGGD+ AAV K G+A K+S+ISTGGGA LELLEGK LPGV ALD
Sbjct:  198 GAKVSGKLEVLETLVNKVDKIVIGGGMAFTFLKAMGYGVGKSLVEDELIPTAKKIMDKAKKKGVTFYLPVDCVVANAFEANATNFVTTVQEIPEGWMALDIGPASATLFAETLRDAKTVIWNGPMGVFEMDAFCRGTFAVAEAVGNCY---ATTVIGGGDTDAAVNKAGVAAKVSYISTGGGAFLELLEGKILPGVKALD 394          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_FRASN (Phosphoglycerate kinase OS=Frankia sp. (strain EAN1pec) GN=pgk PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 6.765e-56
Identity = 117/201 (58.21%), Postives = 145/201 (72.14%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGL-ADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVS K+ VI +LL KVD LL+GGGM FTF  A GH VG+SL+E + +D    L+ +A   G  L+LPTDVV+AD+FAADA + VV A AIPDGW+GLD+GP +  +F+  +    TI WNGPMGVFEF  FA GT  +A+ +A  SG G  +++GGGDS AAV  +G+  D  SHISTGGGASLE LEGKTLPG+ ALD
Sbjct:  205 GSKVSDKLGVIRALLPKVDALLVGGGMCFTFLAALGHPVGASLLESEMIDTCKDLLAEA---GDRLVLPTDVVVADRFAADAETAVVAADAIPDGWLGLDIGPASTAAFARVVAGAATIFWNGPMGVFEFAPFAEGTRGVAEAVA--SGGGF-SVVGGGDSAAAVRILGIPEDDFSHISTGGGASLEYLEGKTLPGLAALD 399          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_ACIBL (Phosphoglycerate kinase OS=Acidobacteria bacterium (strain Ellin345) GN=pgk PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 6.765e-56
Identity = 113/200 (56.50%), Postives = 140/200 (70.00%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADAN-SKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            G+KVS KI VI++L+ KVD +++GGGM +TF KAQG  +G SL E DKLDLA  ++  A  +G+  LLP D V ADKF   A   ++    +IP   M LD+GP  +  FSE +   +TI+WNGPMGVFEFD FA GT AIAK +A     G T+I+GGGDSVAAV   G+ADK++HISTGGGASLE LEGK LPGV AL
Sbjct:  203 GAKVSDKIGVIQNLMAKVDAIIIGGGMAYTFLKAQGQEIGKSLFEADKLDLAKQILADAHKRGLKFLLPVDHVTADKFDMHATPHQIGEGQSIPAEQMALDIGPKTVALFSEEIAKARTIVWNGPMGVFEFDNFAKGTRAIAKAVA--GNSGATSIVGGGDSVAAVHDAGVADKITHISTGGGASLEFLEGKKLPGVEAL 400          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_CLOBB (Phosphoglycerate kinase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=pgk PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 8.835e-56
Identity = 112/201 (55.72%), Postives = 142/201 (70.65%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI VI +LL+KVD +++GGGM +TF KAQG+ +G+SLVEED+LD A  ++ KA+ K V  LLP D  +A +F  D  + V     IP G MGLD+GP     ++ A+   KT+IWNGPMGVFEF+ F  GT A+AK +A+      TTIIGGGDS AAV  +G  DKM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  200 GAKVSDKIAVINNLLDKVDTIIIGGGMAYTFLKAQGYEIGTSLVEEDRLDYAKEMIAKAEEKSVKFLLPVDHRVAAEF-KDVEATVTNDQNIPTGNMGLDIGPKTETVYANAIKDAKTVIWNGPMGVFEFENFNKGTIAVAKAMAD---SNATTIIGGGDSAAAVNILGFGDKMTHISTGGGASLEFLEGKVLPGISALND 396          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_YEAST (Phosphoglycerate kinase OS=Saccharomyces cerevisiae GN=PGK1 PE=1 SV=2)

HSP 1 Score: 216.853 bits (551), Expect = 1.154e-55
Identity = 107/203 (52.71%), Postives = 147/203 (72.41%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKA-QGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVP-ATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KV+ KI++I++LL+KVD +++GGGM FTF K  +   +G S+ ++   ++   LMEKAK+KGV ++LP D +IAD F+ADAN+K V     IP GW GLD GP++ K F+  +   KTI+WNGP GVFEF+KFAAGT+A+  ++ + S  G T IIGGGD+    +K G+ DK+SH+STGGGASLELLEGK LPGV  L +
Sbjct:  212 GAKVADKIQLIDNLLDKVDSIIIGGGMAFTFKKVLENTEIGDSIFDKAGAEIVPKLMEKAKAKGVEVVLPVDFIIADAFSADANTKTVTDKEGIPAGWQGLDNGPESRKLFAATVAKAKTIVWNGPPGVFEFEKFAAGTKALLDEVVKSSAAGNTVIIGGGDTATVAKKYGVTDKISHVSTGGGASLELLEGKELPGVAFLSE 414          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_FINM2 (Phosphoglycerate kinase OS=Finegoldia magna (strain ATCC 29328) GN=pgk PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.154e-55
Identity = 108/201 (53.73%), Postives = 142/201 (70.65%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI VIE+LL+KVD +L+GG M FTF K+QG +VG SL+EEDKLDLA SL+EKA+ KGV + LP D V+A +   +++SKV+      D   G D+G   IK F E +  +KTI+WNGPMGVFE ++F+ GT  IA  L +       TI+GGGDS +A+ K G  DK++H+STGGGASLE LEGK LPG+  +D+
Sbjct:  197 GAKVSDKIGVIENLLDKVDTILIGGAMAFTFIKSQGKNVGKSLIEEDKLDLAKSLLEKAQEKGVKIFLPVDFVVAKEMTEESDSKVINIDDFTDDIAGFDIGTKTIKIFDEEIQKSKTIVWNGPMGVFEIEQFSKGTFEIANSLVK---SKAITIVGGGDSASAIAKSGNKDKVTHVSTGGGASLEFLEGKVLPGIDCIDE 394          
The following BLAST results are available for this feature:
BLAST of CX069492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_LACBA3.037e-5655.22Phosphoglycerate kinase OS=Lactobacillus brevis (s... [more]
PGK_CORJK3.037e-5652.74Phosphoglycerate kinase OS=Corynebacterium jeikeiu... [more]
PGK_MYCS23.966e-5654.73Phosphoglycerate kinase OS=Mycobacterium smegmatis... [more]
PGK_LACPL3.966e-5654.73Phosphoglycerate kinase OS=Lactobacillus plantarum... [more]
PGK_GEOLS5.180e-5655.00Phosphoglycerate kinase OS=Geobacter lovleyi (stra... [more]
PGK_FRASN6.765e-5658.21Phosphoglycerate kinase OS=Frankia sp. (strain EAN... [more]
PGK_ACIBL6.765e-5656.50Phosphoglycerate kinase OS=Acidobacteria bacterium... [more]
PGK_CLOBB8.835e-5655.72Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_YEAST1.154e-5552.71Phosphoglycerate kinase OS=Saccharomyces cerevisia... [more]
PGK_FINM21.154e-5553.73Phosphoglycerate kinase OS=Finegoldia magna (strai... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10G07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10G07-M14-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069492 ID=CX069492; Name=CX069492; organism=Citrus sinensis; type=EST; length=832bp
GAAACTTATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAG
AAAAATGCATCACCATTGATGCCTGTGAGAAAGAATTTATTTTTACTCTT
ACAGCATCTACAAAACCAACTCTAATGATAAAGTTTAACTTTATCCACTC
TGGGCTGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAA
AAGGAAAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCA
GGGAGTGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGA
GATATGGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTG
AGTCACCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCA
AGCTTCTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCAAA
CACACCCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTT
CACTGAATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAACCA
TCTGGAATTGCCGTTGCTGGCACCACCTTGCTGTTGGCATCAGCAGCAAA
CTTGTCAGCAATAACAACATCAGTAGGGAGCAGAAGAGACACCCCTTTAG
ATTTGGCCTTCTCCATAAGTGACGTAGCGAGATCAAGCTTGTCTTCCTCA
ACAAGGGATGAACCAACAGAGTGTCCTTGGGCCTTGTAAAAGGTAAAGAT
CATTCCTCCACCGAGCAATAGAATGTCAACCTTCTCCAAAAGTGATTCAA
TAACACGGATCTTAGTTGACACCTTTGAACCA
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