CX069492

Overview
NameCX069492
Unique NameCX069492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_MYCGI (Phosphoglycerate kinase OS=Mycobacterium gilvum (strain PYR-GCK) GN=pgk PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.571e-55
Identity = 111/201 (55.22%), Postives = 143/201 (71.14%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGL-ADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVS K+ VIE+L  K D L++GGGM FTF  AQG SVGSSL+EE  +D   +L++     G  L LP D+V+A+KF+AD+  + V A  IPD  MGLD+GP++++ FS  L   KTI WNGPMGVFEF  FAAGT+ +A+ +   +GKG  +++GGGDS AAV ++GL  D  SHISTGGGASLE LEGK LPG+  L+
Sbjct:  205 GSKVSDKLAVIENLATKADSLIIGGGMCFTFLAAQGLSVGSSLLEESMIDTCRTLLD---DYGDVLHLPVDIVVAEKFSADSEPQTVAADKIPDDKMGLDIGPESVRRFSALLSNAKTIFWNGPMGVFEFPAFAAGTKGVAEAIIGATGKGAFSVVGGGDSAAAVRQLGLPEDGFSHISTGGGASLEYLEGKELPGIEVLN 402          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_SACEN (Phosphoglycerate kinase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=pgk PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.357e-55
Identity = 112/202 (55.45%), Postives = 146/202 (72.28%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGL-ADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            GSKVS K+ VI++LL KVD LL+GGGM +TF  AQGHSVG SL+++D+++    L+E+    G  L+LP DVV+AD+FAADA S+VV A AIP  WMGLD+GP +++ F+  L  ++T+ WNGP GVFEF  FA GT  IA+ + +    G  +++GGGDS AAV  +GL  D  SHISTGGGASLE LEGK LPGV  L++
Sbjct:  203 GSKVSDKLGVIQALLPKVDKLLIGGGMAYTFLAAQGHSVGKSLLQQDQVESTCKLLEE---HGDKLVLPVDVVVADRFAADAESRVVDADAIPADWMGLDIGPRSVELFAGILAGSRTVFWNGPAGVFEFPAFAEGTRGIAQAIVD---SGSFSVVGGGDSAAAVRSLGLPEDGFSHISTGGGASLEYLEGKELPGVSVLEE 398          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_BORHD (Phosphoglycerate kinase OS=Borrelia hermsii (strain DAH) GN=pgk PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.357e-55
Identity = 102/200 (51.00%), Postives = 146/200 (73.00%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVS+KI V+ESLL K +++++GGGM +TF K +GHS+G SL+E + +D+A S ++KAK   V ++LP D ++A +F  D+  + V A  IPDG +G+D+G   ++   E L + KT+IWNGP+GVFEFD F+ GT  +A+ +A  SG    T++GGGDSVAAV K  L++K++H+STGGGASLE LEGK LPG+  L+
Sbjct:  195 GSKVSSKIAVLESLLPKSNVMVIGGGMAYTFLKVEGHSIGKSLLENEYIDVAASFLKKAKELDVKVILPLDHIVASEFKEDSIPEYVDAIDIPDGKIGMDIGEKTLRKIEEVLVSAKTVIWNGPLGVFEFDSFSKGTAKVAEYVASCSG---ITVVGGGDSVAAVNKFNLSEKITHVSTGGGASLEYLEGKILPGIKVLE 391          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_MYCVP (Phosphoglycerate kinase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.385e-55
Identity = 111/201 (55.22%), Postives = 143/201 (71.14%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGL-ADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVS K+ VIE+L  K D L++GGGM FTF  AQG SVGSSL+EE  ++    L++     G  L LP D+V+A+KFAAD+ ++ V A  IPD  MGLD+GP+++K F+  L   KTI WNGPMGVFEF  FAAGT+ +A+ +   +GKG  +++GGGDS AAV ++GL  D  SHISTGGGASLE LEGK LPG+  L+
Sbjct:  210 GSKVSDKLAVIENLATKADSLVIGGGMCFTFLAAQGLSVGSSLLEESMVETCRKLLD---DYGDVLHLPVDIVVAEKFAADSPAETVAADRIPDDKMGLDIGPESVKRFTALLSNAKTIFWNGPMGVFEFPAFAAGTKGVAEAIIGATGKGAFSVVGGGDSAAAVRQLGLPEDGFSHISTGGGASLEYLEGKELPGIQVLE 407          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_LEPBP (Phosphoglycerate kinase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=pgk PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.385e-55
Identity = 108/199 (54.27%), Postives = 144/199 (72.36%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            GSKVS+K  ++++LLEKVD LL+GGGM +TF K++   VG SLVE +    A  L+++A  +GV L +P D +IAD F  +A +K V    I DGWMG+D+GP  I ++ +A+   KTI+WNGPMGVFE DKF+ GT  IAK +++   K   T++GGGDS+AAV K G+ADK++HISTGGGASLE LEG+TLPGV  L
Sbjct:  195 GSKVSSKFAILKNLLEKVDHLLIGGGMAYTFLKSRAVPVGKSLVEPEFESQAFQLIDRAGIQGVDLQIPVDHIIADAFDPNAKTKSVDKMGIIDGWMGMDIGPKTIDNYVKAIKDAKTILWNGPMGVFEMDKFSKGTIEIAKAISKSKAK---TVVGGGDSIAAVNKAGVADKITHISTGGGASLEFLEGRTLPGVQCL 390          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_LEPBA (Phosphoglycerate kinase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=pgk PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.385e-55
Identity = 108/199 (54.27%), Postives = 144/199 (72.36%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            GSKVS+K  ++++LLEKVD LL+GGGM +TF K++   VG SLVE +    A  L+++A  +GV L +P D +IAD F  +A +K V    I DGWMG+D+GP  I ++ +A+   KTI+WNGPMGVFE DKF+ GT  IAK +++   K   T++GGGDS+AAV K G+ADK++HISTGGGASLE LEG+TLPGV  L
Sbjct:  195 GSKVSSKFAILKNLLEKVDHLLIGGGMAYTFLKSRAVPVGKSLVEPEFESQAFQLIDRAGIQGVDLQIPVDHIIADAFDPNAKTKSVDKMGIIDGWMGMDIGPKTIDNYVKAIKDAKTILWNGPMGVFEMDKFSKGTIEIAKAISKSKAK---TVVGGGDSIAAVNKAGVADKITHISTGGGASLEFLEGRTLPGVQCL 390          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_YARLI (Phosphoglycerate kinase OS=Yarrowia lipolytica GN=PGK1 PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.727e-55
Identity = 107/203 (52.71%), Postives = 138/203 (67.98%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKA-QGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADAN-SKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI++I++LL+KV+ L++GGGM FTF K  +   +G+SL +ED   +   L+EKAK   V L+ P D V ADKF+ DA       A  IPDGW GLD GP +I+ F + +  +KTI+WNGP GVFEFD FA GT+A+     +    G T IIGGGD+    +K G  DK+SH+STGGGASLELLEGKTLPGV AL +
Sbjct:  213 GAKVSDKIQLIDNLLDKVNALIIGGGMAFTFKKTLENVKIGNSLFDEDGSKIVAGLVEKAKKNNVKLVFPVDYVTADKFSKDAKVGHATDAEGIPDGWQGLDCGPKSIEEFQKVIGESKTILWNGPPGVFEFDNFAKGTKAVLDACVKAVDNGATVIIGGGDTATVAKKYGAEDKLSHVSTGGGASLELLEGKTLPGVAALSE 415          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_RENSM (Phosphoglycerate kinase OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=pgk PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.727e-55
Identity = 110/206 (53.40%), Postives = 145/206 (70.39%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPD-----GWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADK-MSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVS K+ VIE+L+ K D +L+GGGM+FTF  AQGH VG+SL+E D++D     + +A++ G S +LPTDVV+A KFAADA  ++V A AI         +GLD+GP+  ++F+E +   KT+ WNGPMGVFEF  FA+GT A+A+ LA+       +++GGGDS AAV  +G AD    HISTGGGASLE LEGK LPG+ ALD
Sbjct:  214 GSKVSDKLAVIENLIGKADSILVGGGMLFTFLAAQGHEVGASLLESDQIDTVKDYLARAEAAGTSFVLPTDVVVASKFAADAAHELVAAQAIESSSFGAAGIGLDIGPETSQAFAEQISAAKTVFWNGPMGVFEFAAFASGTRAVAQALAD---SAAFSVVGGGDSAAAVRTLGFADNAFGHISTGGGASLEFLEGKELPGLTALD 416          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK1_TRYCO (Phosphoglycerate kinase, cytosolic OS=Trypanosoma congolense GN=C1PGK PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.727e-55
Identity = 107/202 (52.97%), Postives = 146/202 (72.28%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGK-GVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            GSKVS KI++++++L+++D LL+GG M +TF KAQGH +G+S+ EED+LDLA SL++KA+ + V +LLP D V   +F A     V     IPDG M LD+GP  I ++ E +   K+ IWNGPMGVFE   ++ GT A+AK + + + K G+ +IIGGGDS +A E+ G A +MSH+STGGGASLELLEGKTLPGV  LD+
Sbjct:  217 GSKVSDKIQLLDNMLQRIDYLLIGGAMAYTFLKAQGHRIGTSMCEEDRLDLARSLLKKAEDRKVQVLLPVDHVCHTEFKAVDTPVVTADADIPDGHMALDIGPKTIANYVETIGKCKSAIWNGPMGVFEMTPYSKGTFAVAKAMGDCTQKNGLMSIIGGGDSASAAEQSGEATRMSHVSTGGGASLELLEGKTLPGVAILDE 418          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_PELPD (Phosphoglycerate kinase OS=Pelobacter propionicus (strain DSM 2379) GN=pgk PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 7.480e-55
Identity = 107/200 (53.50%), Postives = 141/200 (70.50%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            G+KVS K+ V+E L+ KVD +++GGGM FTF K+ G+SVG+S VE++ L  A  +M+KA+ KG+   LP D V+A+ F A A + +     IP+GW+ LD+GP +   F+E L   KT+IWNGPMGVFE D FA GT A+A+ +A       TTIIGGGD+ +AV K G+  K+S+ISTGGGA LELLEGK LPGV ALD
Sbjct:  198 GAKVSGKLEVLEKLMNKVDKVVIGGGMAFTFLKSMGYSVGASKVEDELLPTAKKIMDKARKKGIMFYLPVDCVVANAFEASATNFITTVQEIPEGWLALDIGPASATLFTETLRDAKTVIWNGPMGVFEMDAFARGTFAVAEAVASAF---ATTIIGGGDTDSAVRKAGVESKVSYISTGGGAFLELLEGKVLPGVKALD 394          
The following BLAST results are available for this feature:
BLAST of CX069492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_MYCGI2.571e-5555.22Phosphoglycerate kinase OS=Mycobacterium gilvum (s... [more]
PGK_SACEN3.357e-5555.45Phosphoglycerate kinase OS=Saccharopolyspora eryth... [more]
PGK_BORHD3.357e-5551.00Phosphoglycerate kinase OS=Borrelia hermsii (strai... [more]
PGK_MYCVP4.385e-5555.22Phosphoglycerate kinase OS=Mycobacterium vanbaalen... [more]
PGK_LEPBP4.385e-5554.27Phosphoglycerate kinase OS=Leptospira biflexa sero... [more]
PGK_LEPBA4.385e-5554.27Phosphoglycerate kinase OS=Leptospira biflexa sero... [more]
PGK_YARLI5.727e-5552.71Phosphoglycerate kinase OS=Yarrowia lipolytica GN=... [more]
PGK_RENSM5.727e-5553.40Phosphoglycerate kinase OS=Renibacterium salmonina... [more]
PGK1_TRYCO5.727e-5552.97Phosphoglycerate kinase, cytosolic OS=Trypanosoma ... [more]
PGK_PELPD7.480e-5553.50Phosphoglycerate kinase OS=Pelobacter propionicus ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_10G07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10G07-M14-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069492 ID=CX069492; Name=CX069492; organism=Citrus sinensis; type=EST; length=832bp
GAAACTTATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAG
AAAAATGCATCACCATTGATGCCTGTGAGAAAGAATTTATTTTTACTCTT
ACAGCATCTACAAAACCAACTCTAATGATAAAGTTTAACTTTATCCACTC
TGGGCTGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAA
AAGGAAAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCA
GGGAGTGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGA
GATATGGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTG
AGTCACCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCA
AGCTTCTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCAAA
CACACCCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTT
CACTGAATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAACCA
TCTGGAATTGCCGTTGCTGGCACCACCTTGCTGTTGGCATCAGCAGCAAA
CTTGTCAGCAATAACAACATCAGTAGGGAGCAGAAGAGACACCCCTTTAG
ATTTGGCCTTCTCCATAAGTGACGTAGCGAGATCAAGCTTGTCTTCCTCA
ACAAGGGATGAACCAACAGAGTGTCCTTGGGCCTTGTAAAAGGTAAAGAT
CATTCCTCCACCGAGCAATAGAATGTCAACCTTCTCCAAAAGTGATTCAA
TAACACGGATCTTAGTTGACACCTTTGAACCA
back to top