CX069492

Overview
NameCX069492
Unique NameCX069492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_EXIS2 (Phosphoglycerate kinase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=pgk PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 7.480e-55
Identity = 108/201 (53.73%), Postives = 143/201 (71.14%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            GSKV+ KI VI+ LL+ VD L++GGG+ +TF KAQG+ VG+SL+E DK++ A   M+KA+ KGV  L+P D VI  +F  +         +IP   M LD+GP  ++ ++EA+  +K ++WNGPMGVFE DK+A GT+ +A+ LA+       +IIGGGDS AA EK GLADKMSHISTGGGASLE +EGK LPGV AL+D
Sbjct:  196 GSKVADKIGVIDHLLDIVDTLIIGGGLSYTFLKAQGYEVGTSLLEVDKIEQAKEFMKKAEDKGVKFLMPVDCVITKEFGEETYVGSRDIDSIPADHMSLDIGPKTVELYAEAIKASKLVVWNGPMGVFELDKYANGTKGVAQALAD---SDAYSIIGGGDSAAAAEKFGLADKMSHISTGGGASLEFMEGKALPGVEALND 393          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_CLOB8 (Phosphoglycerate kinase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=pgk PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 7.480e-55
Identity = 109/201 (54.23%), Postives = 143/201 (71.14%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI VI +LL+KV+ +++GGGM +TF KAQG+ +G+SLVEED+L+ A  ++ KA  KGV  LLP D  +A +F  D  + +     IP G MGLD+GP     +++A+   KT+IWNGPMGVFEF+ +  GT A+AK +A+      TTIIGGGDS AAV  +G  DKM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  195 GAKVSDKIAVINNLLDKVNTIIIGGGMAYTFLKAQGYEIGTSLVEEDRLEYAKEMVAKAAEKGVKFLLPVDHRVAAEF-KDVEATITEDQNIPVGNMGLDIGPKTETLYADAIKDAKTVIWNGPMGVFEFENYNKGTIAVAKAMADAD---ATTIIGGGDSAAAVNILGFGDKMTHISTGGGASLEFLEGKVLPGIAALND 391          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_THET2 (Phosphoglycerate kinase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=pgk PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.276e-54
Identity = 109/200 (54.50%), Postives = 143/200 (71.50%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            G+KVS KI VIESLL ++D LL+GG M FTF KA G  VG SLVEED+LDLA  L+ +A++ GV + LP DVV A++  A   ++V PA AIP  +MGLD+GP   ++F+ AL+  +T+ WNGPMGVFE   F  GT A+ + +A L  +G  T++GGGDSVAAV ++GL D+  H+STGGGASLE LE  TLPG+  L+
Sbjct:  192 GAKVSDKIGVIESLLPRIDRLLIGGAMAFTFLKALGGEVGKSLVEEDRLDLAKDLLGRAEALGVRVYLPEDVVAAERIEAGVETRVFPARAIPVPYMGLDIGPKTREAFARALEGARTVFWNGPMGVFEVPPFDEGTLAVGRAIAAL--EGAFTVVGGGDSVAAVNRLGLKDRFGHVSTGGGASLEFLEKGTLPGLEVLE 389          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_SULDN (Phosphoglycerate kinase OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=pgk PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.276e-54
Identity = 106/199 (53.27%), Postives = 143/199 (71.86%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            GSKVS K+  + +LL +VD +L+GGGM FTF K  G+ +G+SLVE+D L+ A  +M++AK  GV   LP DVV+ADKF+ DA SK+V    IP  WMGLD+GP  ++ + E L   +T++WNGPMGV+E DKFA G+  IA  +A+      TTI+GGGD+   V+++G+ D+M+ ISTGGGASLELLEGK LPGV +L
Sbjct:  199 GSKVSGKLEALINLLPRVDKVLIGGGMAFTFLKKLGYDIGASLVEDDLLEEAGRIMDEAKKLGVKFYLPVDVVVADKFSEDAISKIVSYQEIPPLWMGLDIGPATVRLYGEVLSDVQTVLWNGPMGVYEMDKFARGSNKIAHFVAD---SYATTIVGGGDTADLVQRIGVDDEMTFISTGGGASLELLEGKILPGVASL 394          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_SCHMA (Phosphoglycerate kinase OS=Schistosoma mansoni GN=PGK PE=1 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.276e-54
Identity = 109/205 (53.17%), Postives = 147/205 (71.71%), Query Frame = -2
Query:  226 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHS--VGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKV-VPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 831
            G+KVS KI++I ++L+KV+ L++GGGM +TF K Q H+  +G+SL +    ++   +ME AK+K V++ LP D V ADKFA DAN+++    + I DGWMGLD+GP  I+ FS+ +   KTI+WNGPMGVFE DKFA GT+A   ++ + +  G TTIIGGGD+     K    DK+SH+STGGGASLELLEGK LPGV+AL DA
Sbjct:  212 GAKVSDKIQLINNMLDKVNELIIGGGMAYTFLK-QIHNMHIGNSLFDAPGAEIVHKVMETAKAKNVAIHLPVDFVTADKFADDANTEIRTIQSGIADGWMGLDIGPKTIEEFSKVISRAKTIVWNGPMGVFEMDKFATGTKAAMDEVVKATKNGATTIIGGGDTATCCAKWDTEDKVSHVSTGGGASLELLEGKQLPGVVALTDA 415          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_GEOSM (Phosphoglycerate kinase OS=Geobacter sp. (strain M21) GN=pgk PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.276e-54
Identity = 107/201 (53.23%), Postives = 139/201 (69.15%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI V+E+L +KVD +++GGGM FTF K  G++VG SLVE++ +D A    EKA+++GV   LP D V+AD+F   A +KV P   IP+GWM LDVGP  +  F+EAL   KTI+WNGPMGVFE D F+ GT A+   +A        TI+GGGD+  AV + G   K+S+ISTGGGA LELLEGK LPG+  L+D
Sbjct:  198 GAKVSGKIEVLENLCDKVDKIIIGGGMAFTFLKGMGYNVGKSLVEDNLIDTAMKTYEKARAQGVKFYLPVDCVVADQFNPAAETKVCPIQEIPEGWMALDVGPATVTLFTEALQNAKTIVWNGPMGVFEMDAFSRGTFAMVSAVA---NSYALTIVGGGDTDVAVHRAGEYAKISYISTGGGAFLELLEGKKLPGIKVLED 395          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_GEOBB (Phosphoglycerate kinase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=pgk PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.276e-54
Identity = 107/201 (53.23%), Postives = 139/201 (69.15%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI V+E+L +KVD +++GGGM FTF K  G++VG SLVE++ +D A    EKA+++GV   LP D V+AD+F   A +KV P   IP+GWM LDVGP  +  F+EAL   KTI+WNGPMGVFE D F+ GT A+   +A        TI+GGGD+  AV + G   K+S+ISTGGGA LELLEGK LPG+  L+D
Sbjct:  198 GAKVSGKIEVLENLCDKVDKIIIGGGMAFTFLKGMGYNVGKSLVEDNLIDTAMKTYEKARAQGVKFYLPVDCVVADQFNPAAETKVCPIQEIPEGWMALDVGPATVTLFTEALQNAKTIVWNGPMGVFEMDAFSRGTFAMVSAVA---NSYALTIVGGGDTDVAVHRAGEYAKISYISTGGGAFLELLEGKKLPGIKVLED 395          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_MYCPA (Phosphoglycerate kinase OS=Mycobacterium paratuberculosis GN=pgk PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.176e-54
Identity = 110/200 (55.00%), Postives = 139/200 (69.50%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADK-MSHISTGGGASLELLEGKTLPGVLAL 831
            GSKVS K+ VIESL  K D +++GGGM FTF  AQG SVG SL+E + +D    L++        L LP D+V AD+FAADA  + VPA AIPD  MGLD+GP ++K F+  L   +TI WNGPMGVFEF  FAAGT+ +A+ +A  +GKG  +++GGGDS AAV  +G+ +   SHISTGGGASLE LEGK LPG+  L
Sbjct:  209 GSKVSDKLGVIESLATKADSIVIGGGMCFTFLAAQGFSVGKSLLETEMVDTCRRLLDTYVDV---LRLPVDIVAADRFAADAAPQTVPADAIPDDLMGLDIGPGSVKRFTALLSNAETIFWNGPMGVFEFPAFAAGTKGLAEAIAAATGKGAFSVVGGGDSAAAVRALGIPESGFSHISTGGGASLEYLEGKALPGIEVL 405          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_MYCA1 (Phosphoglycerate kinase OS=Mycobacterium avium (strain 104) GN=pgk PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.176e-54
Identity = 110/200 (55.00%), Postives = 139/200 (69.50%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADK-MSHISTGGGASLELLEGKTLPGVLAL 831
            GSKVS K+ VIESL  K D +++GGGM FTF  AQG SVG SL+E + +D    L++        L LP D+V AD+FAADA  + VPA AIPD  MGLD+GP ++K F+  L   +TI WNGPMGVFEF  FAAGT+ +A+ +A  +GKG  +++GGGDS AAV  +G+ +   SHISTGGGASLE LEGK LPG+  L
Sbjct:  209 GSKVSDKLGVIESLATKADSIVIGGGMCFTFLAAQGFSVGKSLLETEMVDTCRRLLDTYVDV---LRLPVDIVAADRFAADAAPQTVPADAIPDDLMGLDIGPGSVKRFTALLSNAETIFWNGPMGVFEFPAFAAGTKGLAEAIAAATGKGAFSVVGGGDSAAAVRALGIPESGFSHISTGGGASLEYLEGKALPGIEVL 405          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_FRASC (Phosphoglycerate kinase OS=Frankia sp. (strain CcI3) GN=pgk PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.176e-54
Identity = 113/201 (56.22%), Postives = 144/201 (71.64%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGL-ADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVS K+ VI +LL KVD LL+GGGM FTF  A GH VG SL+E + ++    L+ +    G  ++LPTDVV+AD+FAADA++ VV A AIP GW+GLD+GP + + F+  L    T+ WNGPMGVFE   FAAGT  +A+ +A  +GKG  +++GGGDS AAV  +G+  D  SHISTGGGASLE LEGKTLPG+ ALD
Sbjct:  205 GSKVSDKLGVIRALLPKVDALLVGGGMCFTFLAALGHGVGGSLLETEMIETCKELLAEG---GERIVLPTDVVVADRFAADADTAVVAADAIPAGWLGLDIGPASTELFAARLAGAATVFWNGPMGVFELAPFAAGTRGVAEAVA--AGKGF-SVVGGGDSAAAVRTLGIPEDAFSHISTGGGASLEYLEGKTLPGLAALD 399          
The following BLAST results are available for this feature:
BLAST of CX069492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_EXIS27.480e-5553.73Phosphoglycerate kinase OS=Exiguobacterium sibiric... [more]
PGK_CLOB87.480e-5554.23Phosphoglycerate kinase OS=Clostridium beijerincki... [more]
PGK_THET21.276e-5454.50Phosphoglycerate kinase OS=Thermus thermophilus (s... [more]
PGK_SULDN1.276e-5453.27Phosphoglycerate kinase OS=Sulfurimonas denitrific... [more]
PGK_SCHMA1.276e-5453.17Phosphoglycerate kinase OS=Schistosoma mansoni GN=... [more]
PGK_GEOSM1.276e-5453.23Phosphoglycerate kinase OS=Geobacter sp. (strain M... [more]
PGK_GEOBB1.276e-5453.23Phosphoglycerate kinase OS=Geobacter bemidjiensis ... [more]
PGK_MYCPA2.176e-5455.00Phosphoglycerate kinase OS=Mycobacterium paratuber... [more]
PGK_MYCA12.176e-5455.00Phosphoglycerate kinase OS=Mycobacterium avium (st... [more]
PGK_FRASC2.176e-5456.22Phosphoglycerate kinase OS=Frankia sp. (strain CcI... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10G07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10G07-M14-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069492 ID=CX069492; Name=CX069492; organism=Citrus sinensis; type=EST; length=832bp
GAAACTTATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAG
AAAAATGCATCACCATTGATGCCTGTGAGAAAGAATTTATTTTTACTCTT
ACAGCATCTACAAAACCAACTCTAATGATAAAGTTTAACTTTATCCACTC
TGGGCTGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAA
AAGGAAAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCA
GGGAGTGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGA
GATATGGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTG
AGTCACCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCA
AGCTTCTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCAAA
CACACCCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTT
CACTGAATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAACCA
TCTGGAATTGCCGTTGCTGGCACCACCTTGCTGTTGGCATCAGCAGCAAA
CTTGTCAGCAATAACAACATCAGTAGGGAGCAGAAGAGACACCCCTTTAG
ATTTGGCCTTCTCCATAAGTGACGTAGCGAGATCAAGCTTGTCTTCCTCA
ACAAGGGATGAACCAACAGAGTGTCCTTGGGCCTTGTAAAAGGTAAAGAT
CATTCCTCCACCGAGCAATAGAATGTCAACCTTCTCCAAAAGTGATTCAA
TAACACGGATCTTAGTTGACACCTTTGAACCA
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