CX069492

Overview
NameCX069492
Unique NameCX069492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_COREF (Phosphoglycerate kinase OS=Corynebacterium efficiens GN=pgk PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.490e-50
Identity = 97/203 (47.78%), Postives = 139/203 (68.47%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE-LSGKGVTTIIGGGDSVAAVEKVGLADK-MSHISTGGGASLELLEGKTLPGVLALDD 831
            GSKVS K+ VIE+L  K D +++GGGM +TF KAQGH V  S+++++ +D    L+E+   K   ++LP D+  A +FA DA  KV    + P+GW+ LD+GP +++ F++ L  +KTI WNGPMGVFEF+ F+ GT  +A+ + +  +  G  +++GGGDS A+V  +GL ++  SHISTGGGASLE LEGK LPGV  L D
Sbjct:  206 GSKVSDKLGVIEALASKADSIIIGGGMCYTFLKAQGHDVQKSMLQDEMIDTCKDLLERFGDK---IVLPVDLTWASEFAKDAEKKVTDLDSAPEGWLSLDIGPKSVEKFADVLGASKTIFWNGPMGVFEFEAFSDGTRGVAQAIIDATANNGAFSVVGGGDSAASVRVLGLDEEGFSHISTGGGASLEFLEGKELPGVAILKD 405          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_SCHPO (Phosphoglycerate kinase OS=Schizosaccharomyces pombe GN=pgk1 PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.252e-50
Identity = 106/203 (52.22%), Postives = 135/203 (66.50%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKA-QGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATA---IPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            G+KV+ KI++I++LL+KV+ L++ GGM FTF K   G  +G SL +E       S+M KAK   V + LP D V ADKF  DA  KV  ATA   IPDGWMGLD GP +   F+E + T+KTI+WNGP GVFEFD FA GT+++     +    G   I+GGGD+    +K G  D +SH+STGGGASLELLEGK LPGV+AL
Sbjct:  211 GAKVADKIQLIDNLLDKVNRLIICGGMAFTFLKVLNGMKIGDSLFDEAGSKNVESMMAKAKKNNVEVFLPVDFVTADKFDKDA--KVGSATAEEGIPDGWMGLDCGPKSSAKFAEVITTSKTIVWNGPAGVFEFDNFAKGTKSMLDACVKTCEAGNVVIVGGGDTATVAKKYGKEDALSHVSTGGGASLELLEGKALPGVVAL 411          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGKC_CRIFA (Phosphoglycerate kinase, glycosomal OS=Crithidia fasciculata GN=PGKC PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.252e-50
Identity = 100/200 (50.00%), Postives = 140/200 (70.00%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGK-GVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            G+KVS KI++++++L +++ L++GG M +TF KAQGH++G S+ EEDKLDLA SL++KA+ + V +LLP D V   +F       V     IP+G+M LD+GP  IK + + +   K+ IWNGPMGVFE   ++ GT A+AK +   + K G+ +IIGGGD+ +A E  G A  MSH+STGGGASLELLEGK+LPGV  L
Sbjct:  214 GAKVSDKIQLLDNMLGRINYLVIGGAMAYTFQKAQGHAIGISMCEEDKLDLAKSLLKKAQERNVEVLLPVDHVCNKEFQGVDAPLVTKDVEIPEGYMALDIGPKTIKIYEDVIAKCKSTIWNGPMGVFEMPCYSKGTFAVAKAMGNGTQKNGLMSIIGGGDTASAAELSGEAKNMSHVSTGGGASLELLEGKSLPGVTVL 413          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGKB_CRIFA (Phosphoglycerate kinase, cytosolic OS=Crithidia fasciculata GN=PGKB PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.252e-50
Identity = 100/200 (50.00%), Postives = 140/200 (70.00%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGK-GVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            G+KVS KI++++++L +++ L++GG M +TF KAQGH++G S+ EEDKLDLA SL++KA+ + V +LLP D V   +F       V     IP+G+M LD+GP  IK + + +   K+ IWNGPMGVFE   ++ GT A+AK +   + K G+ +IIGGGD+ +A E  G A  MSH+STGGGASLELLEGK+LPGV  L
Sbjct:  214 GAKVSDKIQLLDNMLGRINYLVIGGAMAYTFQKAQGHAIGISMCEEDKLDLAKSLLKKAQERNVEVLLPVDHVCNKEFQGVDAPLVTKDVEIPEGYMALDIGPKTIKIYEDVIAKCKSTIWNGPMGVFEMPCYSKGTFAVAKAMGNGTQKNGLMSIIGGGDTASAAELSGEAKNMSHVSTGGGASLELLEGKSLPGVTVL 413          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK2_MOUSE (Phosphoglycerate kinase 2 OS=Mus musculus GN=Pgk2 PE=1 SV=3)

HSP 1 Score: 198.749 bits (504), Expect = 3.252e-50
Identity = 100/205 (48.78%), Postives = 141/205 (68.78%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKA-QGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPAT---AIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KV  KI++I+++L+KV+ +++GGGM +TF K  +   +G+SL +E+   +   +MEKA+  GV ++ P D V  DKF  D N+KV  AT    IP GWMGLD GP++IK  ++ +   K I+WNGP+GVFE+D FA GT+A+  ++ + +  G  TIIGGGD+     K G  DK+SH+STGGGASLELLEGK LPGV AL +
Sbjct:  214 GAKVKDKIQLIKNMLDKVNFMIIGGGMAYTFLKELKNMQIGASLFDEEGATIVKEIMEKAEKNGVKIVFPVDFVTGDKF--DENAKVGQATIESGIPSGWMGLDCGPESIKINAQIVAQAKLIVWNGPIGVFEWDAFAKGTKALMDEVVKATSNGCVTIIGGGDTATCCAKWGTEDKVSHVSTGGGASLELLEGKILPGVEALSN 416          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK1_PONAB (Phosphoglycerate kinase 1 OS=Pongo abelii GN=PGK1 PE=2 SV=4)

HSP 1 Score: 198.749 bits (504), Expect = 3.252e-50
Identity = 98/203 (48.28%), Postives = 141/203 (69.46%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGH-SVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANS-KVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KV+ KI++I ++L+KV+ +++GGGM FTF K   +  +G+SL +E+   +   LM KA+  GV + LP D V ADKF  +A + +   A+ IP GWMGLD GP++ K ++EA+   K I+WNGP+GVFE++ FA GT+A+  ++ + + +G  TIIGGGD+     K    DK+SH+STGGGASLELLEGK LPGV AL +
Sbjct:  214 GAKVADKIQLINNMLDKVNEMIIGGGMAFTFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFAQGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDALSN 416          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK1_PANTR (Phosphoglycerate kinase 1 OS=Pan troglodytes GN=PGK1 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.252e-50
Identity = 98/203 (48.28%), Postives = 141/203 (69.46%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGH-SVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANS-KVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KV+ KI++I ++L+KV+ +++GGGM FTF K   +  +G+SL +E+   +   LM KA+  GV + LP D V ADKF  +A + +   A+ IP GWMGLD GP++ K ++EA+   K I+WNGP+GVFE++ FA GT+A+  ++ + + +G  TIIGGGD+     K    DK+SH+STGGGASLELLEGK LPGV AL +
Sbjct:  214 GAKVADKIQLINNMLDKVNEMIIGGGMAFTFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDALSN 416          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK1_MACFA (Phosphoglycerate kinase 1 OS=Macaca fascicularis GN=PGK1 PE=2 SV=3)

HSP 1 Score: 198.749 bits (504), Expect = 3.252e-50
Identity = 98/203 (48.28%), Postives = 141/203 (69.46%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGH-SVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANS-KVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KV+ KI++I ++L+KV+ +++GGGM FTF K   +  +G+SL +E+   +   LM KA+  GV + LP D V ADKF  +A + +   A+ IP GWMGLD GP++ K ++EA+   K I+WNGP+GVFE++ FA GT+A+  ++ + + +G  TIIGGGD+     K    DK+SH+STGGGASLELLEGK LPGV AL +
Sbjct:  214 GAKVADKIQLINNMLDKVNEMIIGGGMAFTFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFAQGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDALSN 416          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK1_HUMAN (Phosphoglycerate kinase 1 OS=Homo sapiens GN=PGK1 PE=1 SV=3)

HSP 1 Score: 198.749 bits (504), Expect = 3.252e-50
Identity = 98/203 (48.28%), Postives = 141/203 (69.46%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGH-SVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANS-KVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KV+ KI++I ++L+KV+ +++GGGM FTF K   +  +G+SL +E+   +   LM KA+  GV + LP D V ADKF  +A + +   A+ IP GWMGLD GP++ K ++EA+   K I+WNGP+GVFE++ FA GT+A+  ++ + + +G  TIIGGGD+     K    DK+SH+STGGGASLELLEGK LPGV AL +
Sbjct:  214 GAKVADKIQLINNMLDKVNEMIIGGGMAFTFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDALSN 416          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGKC_TRYBB (Phosphoglycerate kinase, glycosomal OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 4.247e-50
Identity = 100/202 (49.50%), Postives = 142/202 (70.30%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGK-GVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI++++++L+++D LL+GG M +TF KAQG+S+G S  EE KL+ A SL++KA+ + V ++LP D V   +F A  +  +     IP+G M LD+GP  I+ + + +   K+ IWNGPMGVFE   ++ GT AIAK +   + + G+ +IIGGGDS +A E  G A +MSH+STGGGASLELLEGKTLPGV  LD+
Sbjct:  217 GAKVSDKIQLLDNMLQRIDYLLIGGAMAYTFLKAQGYSIGKSKCEESKLEFARSLLKKAEDRKVQVILPIDHVCHTEFKAVDSPLITEDQNIPEGHMALDIGPKTIEKYVQTIGKCKSAIWNGPMGVFEMVPYSKGTFAIAKAMGRGTHEHGLMSIIGGGDSASAAELSGEAKRMSHVSTGGGASLELLEGKTLPGVTVLDE 418          
The following BLAST results are available for this feature:
BLAST of CX069492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_COREF2.490e-5047.78Phosphoglycerate kinase OS=Corynebacterium efficie... [more]
PGK_SCHPO3.252e-5052.22Phosphoglycerate kinase OS=Schizosaccharomyces pom... [more]
PGKC_CRIFA3.252e-5050.00Phosphoglycerate kinase, glycosomal OS=Crithidia f... [more]
PGKB_CRIFA3.252e-5050.00Phosphoglycerate kinase, cytosolic OS=Crithidia fa... [more]
PGK2_MOUSE3.252e-5048.78Phosphoglycerate kinase 2 OS=Mus musculus GN=Pgk2 ... [more]
PGK1_PONAB3.252e-5048.28Phosphoglycerate kinase 1 OS=Pongo abelii GN=PGK1 ... [more]
PGK1_PANTR3.252e-5048.28Phosphoglycerate kinase 1 OS=Pan troglodytes GN=PG... [more]
PGK1_MACFA3.252e-5048.28Phosphoglycerate kinase 1 OS=Macaca fascicularis G... [more]
PGK1_HUMAN3.252e-5048.28Phosphoglycerate kinase 1 OS=Homo sapiens GN=PGK1 ... [more]
PGKC_TRYBB4.247e-5049.50Phosphoglycerate kinase, glycosomal OS=Trypanosoma... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10G07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10G07-M14-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069492 ID=CX069492; Name=CX069492; organism=Citrus sinensis; type=EST; length=832bp
GAAACTTATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAG
AAAAATGCATCACCATTGATGCCTGTGAGAAAGAATTTATTTTTACTCTT
ACAGCATCTACAAAACCAACTCTAATGATAAAGTTTAACTTTATCCACTC
TGGGCTGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAA
AAGGAAAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCA
GGGAGTGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGA
GATATGGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTG
AGTCACCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCA
AGCTTCTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCAAA
CACACCCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTT
CACTGAATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAACCA
TCTGGAATTGCCGTTGCTGGCACCACCTTGCTGTTGGCATCAGCAGCAAA
CTTGTCAGCAATAACAACATCAGTAGGGAGCAGAAGAGACACCCCTTTAG
ATTTGGCCTTCTCCATAAGTGACGTAGCGAGATCAAGCTTGTCTTCCTCA
ACAAGGGATGAACCAACAGAGTGTCCTTGGGCCTTGTAAAAGGTAAAGAT
CATTCCTCCACCGAGCAATAGAATGTCAACCTTCTCCAAAAGTGATTCAA
TAACACGGATCTTAGTTGACACCTTTGAACCA
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