CX069492

Overview
NameCX069492
Unique NameCX069492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_STAES (Phosphoglycerate kinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pgk PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.784e-48
Identity = 99/201 (49.25%), Postives = 133/201 (66.17%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI VI++L+   D +L+GGGM +TF KAQG  +G SL+EEDK+D A  L+E   + G  ++LP D  IA +F+ DA    V    IP     +D+GP  ++ F++ L    T++WNGPMGVFEF  FA GT  + + +A+L  +  TTIIGGGDS AA   +G  D  +HISTGGGASLE LEGK LPG+ A++D
Sbjct:  200 GAKVSDKINVIKNLVNIADKILIGGGMAYTFIKAQGKEIGLSLLEEDKIDFAKDLLE---NNGDQIVLPVDCKIAKEFSNDAKITEVSINEIPSDQEAMDIGPKTVELFNKELQGAHTVVWNGPMGVFEFSNFAKGTIGVCESIAKL--EDATTIIGGGDSAAAAISLGFEDDFTHISTGGGASLEYLEGKELPGIKAIND 395          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_STAEQ (Phosphoglycerate kinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pgk PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.784e-48
Identity = 99/201 (49.25%), Postives = 133/201 (66.17%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI VI++L+   D +L+GGGM +TF KAQG  +G SL+EEDK+D A  L+E   + G  ++LP D  IA +F+ DA    V    IP     +D+GP  ++ F++ L    T++WNGPMGVFEF  FA GT  + + +A+L  +  TTIIGGGDS AA   +G  D  +HISTGGGASLE LEGK LPG+ A++D
Sbjct:  200 GAKVSDKINVIKNLVNIADKILIGGGMAYTFIKAQGKEIGLSLLEEDKIDFAKDLLE---NNGDQIVLPVDCKIAKEFSNDAKITEVSINEIPSDQEAMDIGPKTVELFNKELQGAHTVVWNGPMGVFEFSNFAKGTIGVCESIAKL--EDATTIIGGGDSAAAAISLGFEDDFTHISTGGGASLEYLEGKELPGIKAIND 395          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_ONYPE (Phosphoglycerate kinase OS=Onion yellows phytoplasma GN=pgk PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.784e-48
Identity = 101/200 (50.50%), Postives = 136/200 (68.00%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVS KI VI SLL+KVD+LL+GGGM +T  KA+  ++G+SL+E DK+ L   L+  A  +G  ++LP D V   +F+    + V     I D  MGLD+GP  I+ F   L T +T++WNGP+GVFEF++F+ GT+A+A+ ++ LS    TTIIGGGDS AAV K GL    SHISTGGGA LE LEGK +PG+  ++
Sbjct:  200 GSKVSDKIGVIRSLLQKVDVLLIGGGMSYTCLKAKCFNIGTSLLEADKIPLVKELL--ASPEGKKIVLPKDFVCGKEFSPTTQAAVYSYDNISDDVMGLDIGPQTIELFKTYLQTAQTVVWNGPVGVFEFEQFSKGTKALAETISNLS-PNTTTIIGGGDSAAAVFKFGLDQNFSHISTGGGAFLEFLEGKPMPGLACME 396          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK2_HORSE (Phosphoglycerate kinase 2 OS=Equus caballus GN=PGK2 PE=3 SV=3)

HSP 1 Score: 192.586 bits (488), Expect = 2.331e-48
Identity = 94/203 (46.31%), Postives = 137/203 (67.49%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGH-SVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADAN-SKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KV+ KI++I+++L+KV+ +++GGGM +TF K   +  +G+SL +E+   +   +M KA   GV +  P D V ADKF  +A   +   A+ IP GWMGLD GP+  K +++ +   K I+WNGP+GVFE+D FA GT+A+  ++ + + +G  TIIGGGD+     K    DK+SH+STGGGASLELLEGK LPGV AL +
Sbjct:  214 GAKVADKIQLIKNMLDKVNEMIIGGGMAYTFLKVLNNMEIGASLFDEEGAKIVKDIMAKANKNGVRITFPVDFVTADKFEENAKVGQATVASGIPAGWMGLDCGPETNKKYAQVMAQAKLIVWNGPVGVFEWDAFAKGTKALMDEIVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKILPGVDALSN 416          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_SHEHH (Phosphoglycerate kinase OS=Shewanella halifaxensis (strain HAW-EB4) GN=pgk PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.044e-48
Identity = 98/200 (49.00%), Postives = 138/200 (69.00%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVSTK+ V+ESL  KVD L++GGG+  TF  A GH VG SL E D ++ A  L+  A+S+G  + +PTDVV+A +F+  A + +   + + D  M  D+GPD+ ++ +E +    T++WNGP+GVFEFD+F  GT+ IA+ +AE       +I GGGD++AAV+K G+ADK+S+ISTGGGA LE LEGK LP V  L+
Sbjct:  191 GSKVSTKLTVLESLSTKVDQLVVGGGIANTFVAAAGHQVGKSLYEADLIEEAKRLVANAQSRGGDIPVPTDVVVASEFSPTATATLKDVSTVSDTDMIFDIGPDSAEALAEIIKNAGTVVWNGPVGVFEFDQFGEGTKRIAQAIAE---SNAFSIAGGGDTLAAVDKYGIADKVSYISTGGGAFLEFLEGKELPAVAMLE 387          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGKD_TRYBB (Phosphoglycerate kinase A OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.044e-48
Identity = 99/202 (49.01%), Postives = 139/202 (68.81%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGK-GVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI++++++L+++D LL+GG M +TF KAQG+S+G S  EE KL+ A SL++KA+ + V ++LP D V   +F A  +  +     IP+G M LD+GP  I+ + + +   K+ IWNGPMGVFE   ++ GT AIAK +   + K G+ +IIGGG+S  A E  G    +SH+STGGGASLELLEGKTLPGV  LDD
Sbjct:  306 GAKVSEKIQLLDNMLQRIDYLLIGGAMAYTFLKAQGYSIGKSKCEESKLEFARSLLKKAEDRKVQIILPIDHVCHTEFKAVDSPLITEDQNIPEGHMALDIGPKTIEKYVQTIGKCKSAIWNGPMGVFEMVPYSKGTFAIAKAMGRGTQKRGLMSIIGGGESAGAAELCGKL-SISHVSTGGGASLELLEGKTLPGVAVLDD 506          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK1_MACEU (Phosphoglycerate kinase 1 OS=Macropus eugenii GN=PGK1 PE=2 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 3.044e-48
Identity = 99/205 (48.29%), Postives = 137/205 (66.83%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGH-SVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPAT---AIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KV+ KI++I ++L+KV+ +++GGGM FTF K   +  +G+SL +E+   +   LM KA+  GV + LP D V ADKF  D N+K   AT    IP GWMGLD GP + K + E +   K I+WNGP+GVFE+++FA GT+ +   + E + +G  TIIGGGD+     K    DK+SH+STGGGASLELLEGK LPGV  L++
Sbjct:  214 GAKVADKIQLINNMLDKVNEMIIGGGMGFTFLKVLNNMEIGTSLFDEEGAKIVKDLMAKAEKNGVKITLPVDFVTADKF--DENAKTGQATLASGIPAGWMGLDCGPKSSKKYVEVVTWAKQIVWNGPVGVFEWEEFARGTKELMNNVVEATKRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVSTLNN 416          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_THERP (Phosphoglycerate kinase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=pgk PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.192e-48
Identity = 95/199 (47.74%), Postives = 140/199 (70.35%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            G+KVS KI VIE+LL + D LLLGGGM  TF +A+G   G SLVEE+K+  A  +++ A ++GV + LP DVV+A   +A +  ++VP TAIP      D+GP+ ++++S  +   + ++WNGPMGV+E  +F  GT+ IA+ +A  SG    T++GGGDS AA++++GLA+++ H+STGGGA+LE LEG+ LPGV  L
Sbjct:  193 GAKVSDKIGVIENLLPRADALLLGGGMANTFLRARGLETGRSLVEEEKVPEAQRILDLAAARGVRVELPRDVVVAPTMSAVSQRRIVPVTAIPPDQAVYDIGPETVRAYSAVIAGARLLVWNGPMGVYEVPEFREGTKGIAEAVAGCSG---FTLVGGGDSAAALQELGLAERVGHLSTGGGATLEYLEGRELPGVAVL 388          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_SHEB9 (Phosphoglycerate kinase OS=Shewanella baltica (strain OS195) GN=pgk PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.192e-48
Identity = 98/200 (49.00%), Postives = 141/200 (70.50%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVSTK+ V+ESL   VD L++GGG+  TF  A G++VG SL E D +D A  L+  AKS+G  + +PTDVV+A +F+  A + +   + + DG M  D+GPD+ ++ ++ +++  TI+WNGP+GVFEFD+F  GT+ IA+ +A+       +I GGGD++AAV+K G+ADK+S+ISTGGGA LE LEGK LP V  L+
Sbjct:  191 GSKVSTKLTVLESLSGIVDQLVVGGGIANTFIAAAGYNVGKSLYEADLIDEAKRLVANAKSRGADIPVPTDVVVAGEFSPTAAATLKSVSEVADGEMIFDIGPDSAEALAKIIESAGTIVWNGPVGVFEFDQFGEGTKRIAQAIAD---SKAFSIAGGGDTLAAVDKYGIADKVSYISTGGGAFLEFLEGKELPAVAMLE 387          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_SHEB2 (Phosphoglycerate kinase OS=Shewanella baltica (strain OS223) GN=pgk PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.192e-48
Identity = 98/200 (49.00%), Postives = 141/200 (70.50%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVSTK+ V+ESL   VD L++GGG+  TF  A G++VG SL E D +D A  L+  AKS+G  + +PTDVV+A +F+  A + +   + + DG M  D+GPD+ ++ ++ +++  TI+WNGP+GVFEFD+F  GT+ IA+ +A+       +I GGGD++AAV+K G+ADK+S+ISTGGGA LE LEGK LP V  L+
Sbjct:  191 GSKVSTKLTVLESLSGIVDQLVVGGGIANTFIAAAGYNVGKSLYEADLIDEAKRLVANAKSRGADIPVPTDVVVAGEFSPTAAATLKSVSEVADGEMIFDIGPDSAEALAKIIESAGTIVWNGPVGVFEFDQFGEGTKRIAQAIAD---SKAFSIAGGGDTLAAVDKYGIADKVSYISTGGGAFLEFLEGKELPAVAMLE 387          
The following BLAST results are available for this feature:
BLAST of CX069492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_STAES1.784e-4849.25Phosphoglycerate kinase OS=Staphylococcus epidermi... [more]
PGK_STAEQ1.784e-4849.25Phosphoglycerate kinase OS=Staphylococcus epidermi... [more]
PGK_ONYPE1.784e-4850.50Phosphoglycerate kinase OS=Onion yellows phytoplas... [more]
PGK2_HORSE2.331e-4846.31Phosphoglycerate kinase 2 OS=Equus caballus GN=PGK... [more]
PGK_SHEHH3.044e-4849.00Phosphoglycerate kinase OS=Shewanella halifaxensis... [more]
PGKD_TRYBB3.044e-4849.01Phosphoglycerate kinase A OS=Trypanosoma brucei br... [more]
PGK1_MACEU3.044e-4848.29Phosphoglycerate kinase 1 OS=Macropus eugenii GN=P... [more]
PGK_THERP5.192e-4847.74Phosphoglycerate kinase OS=Thermomicrobium roseum ... [more]
PGK_SHEB95.192e-4849.00Phosphoglycerate kinase OS=Shewanella baltica (str... [more]
PGK_SHEB25.192e-4849.00Phosphoglycerate kinase OS=Shewanella baltica (str... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10G07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10G07-M14-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069492 ID=CX069492; Name=CX069492; organism=Citrus sinensis; type=EST; length=832bp
GAAACTTATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAG
AAAAATGCATCACCATTGATGCCTGTGAGAAAGAATTTATTTTTACTCTT
ACAGCATCTACAAAACCAACTCTAATGATAAAGTTTAACTTTATCCACTC
TGGGCTGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAA
AAGGAAAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCA
GGGAGTGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGA
GATATGGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTG
AGTCACCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCA
AGCTTCTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCAAA
CACACCCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTT
CACTGAATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAACCA
TCTGGAATTGCCGTTGCTGGCACCACCTTGCTGTTGGCATCAGCAGCAAA
CTTGTCAGCAATAACAACATCAGTAGGGAGCAGAAGAGACACCCCTTTAG
ATTTGGCCTTCTCCATAAGTGACGTAGCGAGATCAAGCTTGTCTTCCTCA
ACAAGGGATGAACCAACAGAGTGTCCTTGGGCCTTGTAAAAGGTAAAGAT
CATTCCTCCACCGAGCAATAGAATGTCAACCTTCTCCAAAAGTGATTCAA
TAACACGGATCTTAGTTGACACCTTTGAACCA
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