CX069492

Overview
NameCX069492
Unique NameCX069492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_NEIG2 (Phosphoglycerate kinase OS=Neisseria gonorrhoeae (strain NCCP11945) GN=pgk PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.511e-47
Identity = 96/200 (48.00%), Postives = 139/200 (69.50%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVSTK+ ++ESL +KVD L++GGG+  TF  A+G ++G SL E D ++ +  +M K  +KG S+ LPTDVV+A  FAADA + V     + +  M LD+GP +  + +E L    T++WNGP+GVFEFD+FA GT+A+A+ +A+       +I GGGD++AA+ K G+ +++ +ISTGGGA LE LEGK LP V AL+
Sbjct:  192 GSKVSTKLTILESLADKVDQLIVGGGIANTFLLAEGKAIGKSLAEHDLVEESKKIMAKMAAKGGSVPLPTDVVVAKAFAADAEAVVKDIADVAEDEMILDIGPKSAAALAELLKAAGTVVWNGPVGVFEFDQFAGGTKALAEAIAQ---SKAFSIAGGGDTLAAIAKFGVTEQIGYISTGGGAFLEFLEGKELPAVAALE 388          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_DESDA (Phosphoglycerate kinase OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=pgk PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.511e-47
Identity = 99/201 (49.25%), Postives = 134/201 (66.67%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVSTK+ ++E+LLEKVD+L++GGG+  TF  A G+ VG SL EED L  A  +M  AK+    L LP DV+ A++ A    + +     +P   M LD+GP+ +  + + L    T++WNGP+G FE + F  GT+A+A+    LS      ++GGGDSVAAVEK GLAD+M +ISTGGGASLELLEGK LP V AL+D
Sbjct:  190 GAKVSTKLTLLENLLEKVDVLIVGGGIANTFLAAAGYMVGKSLYEEDLLPEAQKIMALAKTLNKELPLPVDVITAEELAPRQQTMLHAVGDVPGDQMILDIGPETLTLYEKFLSKAATVVWNGPVGAFEIEPFGDGTKALAE---YLSDSKAFVVVGGGDSVAAVEKYGLADRMGYISTGGGASLELLEGKKLPSVAALED 387          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGKA_TRYBB (Phosphoglycerate kinase A OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.511e-47
Identity = 98/202 (48.51%), Postives = 139/202 (68.81%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGK-GVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI++++++ +++D LL+GG M +TF KAQG+S+G S  EE KL+ A SL++KA+ + V ++LP D V   +F A  +  +     IP+G M LD+GP  I+ + + +   K+ IWNGPMGVFE   ++ GT AIAK +   + K G+ +IIGGG+S  A E    A ++SH+STGGGASLELLEGKTLPGV  LDD
Sbjct:  306 GAKVSEKIQLLDNMKQRIDYLLIGGAMAYTFLKAQGYSIGKSKCEESKLEFARSLLKKAEDRKVQVILPIDHVCHTEFKAVDSPLITEDQNIPEGHMALDIGPKTIEKYVQTIGKCKSAIWNGPMGVFEMVPYSKGTFAIAKAMGRGTQKRGLMSIIGGGESAGAAE----AARISHVSTGGGASLELLEGKTLPGVAVLDD 503          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK2_PIG (Phosphoglycerate kinase 2 OS=Sus scrofa GN=PGK2 PE=2 SV=3)

HSP 1 Score: 189.889 bits (481), Expect = 1.511e-47
Identity = 93/203 (45.81%), Postives = 138/203 (67.98%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGH-SVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADAN-SKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KV+ KI++I+++L+KV+ +++GGGM FTF K   +  +G+SL +++   +   +M KA+   V++  P D VIADKF  +A   +   A+ IP GW+ LD GP+  K +++ +   K I+WNGP+GVFE+D FA GT+A+  ++ + + KG  TIIGGGD+     K    DK+SH+STGGGASLELLEGK LPGV AL +
Sbjct:  214 GAKVADKIQLIKNMLDKVNEMIIGGGMAFTFLKVLNNMEIGASLFDKEGATIVKEIMAKAEKNRVNITFPVDFVIADKFEENAKVGQATVASGIPAGWVALDCGPETNKKYAQVVARAKLIVWNGPLGVFEWDAFANGTKALMDEIVKATSKGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVEALSN 416          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_SHEPW (Phosphoglycerate kinase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=pgk PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.973e-47
Identity = 98/200 (49.00%), Postives = 138/200 (69.00%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVSTK+ V+ESL  KVD L++GGG+  TF  A GH+VG SL E D +D A  L+  A+S G  + +PTDVV+A +F+  A + +   +A+ D  M  D+GPD+ ++ +E +    T++WNGP+GVFEFD+F  GT+ IA+ +A+       +I GGGD++AAV+K  +ADK+S+ISTGGGA LE LEGK LP V  L+
Sbjct:  191 GSKVSTKLTVLESLSTKVDQLVVGGGIANTFVAAAGHNVGKSLYEADLIDEAKRLVAAAQSGGGDIPVPTDVVVAGEFSPTATATLKDVSAVSDTDMIFDIGPDSAEALAEIIKNAGTVVWNGPVGVFEFDQFGEGTKRIAQAIAD---SNAFSIAGGGDTLAAVDKYDIADKVSYISTGGGAFLEFLEGKELPAVAMLE 387          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK1_RHINI (Phosphoglycerate kinase 1 OS=Rhizopus niveus GN=PGK1 PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.973e-47
Identity = 102/202 (50.50%), Postives = 136/202 (67.33%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGH-SVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSK-VVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTT-IIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            G+KVS KI++IE++L+KV+ L++ GGM FTF K   +  +G SL +E    L  +L++KA  K V ++ P D + ADKFA DA++        IPDGW GLD G  + K F E +  +KTI+WNGP GVFEFD F++GT+A+   +   + +G TT IIGGGD+  A  K G   ++SHISTGGGASLELLEGK LPGV AL
Sbjct:  212 GAKVSDKIQLIENMLDKVNALIICGGMAFTFKKTLDNVKIGKSLFDEPGSKLVQNLVKKAAEKNVKIVFPVDFITADKFAPDASTGYATDDDGIPDGWQGLDCGERSNKLFREEILKSKTIVWNGPSGVFEFDAFSSGTKAVLDAVINATKEGATTIIIGGGDTATAALKWGAEGQVSHISTGGGASLELLEGKELPGVTAL 413          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_SHEB8 (Phosphoglycerate kinase OS=Shewanella baltica (strain OS185) GN=pgk PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.577e-47
Identity = 97/200 (48.50%), Postives = 140/200 (70.00%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVSTK+ V+ESL   VD L++GGG+  TF  A G++VG SL E D +D A  L+  AKS+G  + +PTDVV+A +F+  A + +   + + D  M  D+GPD+ ++ ++ +++  TI+WNGP+GVFEFD+F  GT+ IA+ +A+       +I GGGD++AAV+K G+ADK+S+ISTGGGA LE LEGK LP V  L+
Sbjct:  191 GSKVSTKLTVLESLSGIVDQLVVGGGIANTFIAAAGYNVGKSLYEADLIDEAKRLVANAKSRGADIPVPTDVVVAGEFSPTAAATLKSVSEVADSEMIFDIGPDSAEALAKIIESAGTIVWNGPVGVFEFDQFGEGTKRIAQAIAD---SKAFSIAGGGDTLAAVDKYGIADKVSYISTGGGAFLEFLEGKELPAVAMLE 387          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_SHEB5 (Phosphoglycerate kinase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=pgk PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.577e-47
Identity = 98/200 (49.00%), Postives = 140/200 (70.00%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVSTK+ V+ESL   VD L++GGG+  TF  A G++VG SL E D +D A  L+  AKS+G  + +PTDVV+A +F+  A + +   + + DG M  D+GPD+ ++ ++ + +  TI+WNGP+GVFEFD+F  GT+ IA+ +A+       +I GGGD++AAV+K G+ADK+S+ISTGGGA LE LEGK LP V  L+
Sbjct:  191 GSKVSTKLTVLESLSGIVDQLVVGGGIANTFIAAAGYNVGKSLYEADLIDEAKRLVANAKSRGADIPVPTDVVVAGEFSPIAAATLKSVSEVADGEMIFDIGPDSAEALAKIIASAGTIVWNGPVGVFEFDQFGEGTKRIAQAIAD---SKAFSIAGGGDTLAAVDKYGIADKVSYISTGGGAFLEFLEGKELPAVAMLE 387          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_NEIM0 (Phosphoglycerate kinase OS=Neisseria meningitidis serogroup C (strain 053442) GN=pgk PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.577e-47
Identity = 95/200 (47.50%), Postives = 138/200 (69.00%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVSTK+ ++ESL +KVD L++GGG+  TF  A+G ++G SL E D ++ +  +M K  +KG S+ LPTDVV+A  FAADA + V     + +  M LD+GP +  + ++ L    T++WNGP+GVFEFD+FA GT+A+ + +A+       +I GGGD++AA+ K G+ D++ +ISTGGGA LE LEGK LP V AL+
Sbjct:  192 GSKVSTKLTILESLADKVDQLIVGGGIANTFLLAEGKAIGKSLAEHDLVEESKKIMAKMAAKGGSVPLPTDVVVAKAFAADAEAVVKDIADVAEDEMILDIGPKSAAALADLLKAADTVVWNGPVGVFEFDQFAGGTKALTEAIAQ---SKAFSIAGGGDTLAAIAKFGVTDQIGYISTGGGAFLEFLEGKELPAVAALE 388          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK2_HUMAN (Phosphoglycerate kinase 2 OS=Homo sapiens GN=PGK2 PE=1 SV=3)

HSP 1 Score: 189.119 bits (479), Expect = 2.577e-47
Identity = 92/203 (45.32%), Postives = 137/203 (67.49%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGH-SVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADAN-SKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KV+ KI++I+++L+KV+ +++GGGM +TF K   +  +G+SL +E+   +   +M KA+  GV +  P D V  DKF  +A   K   A+ I  GWMGLD GP++ K+ ++ +   + I+WNGP+GVFE+D FA GT+A+  ++ + + KG  T+IGGGD+     K    DK+SH+STGGGASLELLEGK LPGV AL +
Sbjct:  214 GAKVADKIQLIKNMLDKVNEMIIGGGMAYTFLKVLNNMEIGASLFDEEGAKIVKDIMAKAQKNGVRITFPVDFVTGDKFDENAQVGKATVASGISPGWMGLDCGPESNKNHAQVVAQARLIVWNGPLGVFEWDAFAKGTKALMDEIVKATSKGCITVIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKILPGVEALSN 416          
The following BLAST results are available for this feature:
BLAST of CX069492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_NEIG21.511e-4748.00Phosphoglycerate kinase OS=Neisseria gonorrhoeae (... [more]
PGK_DESDA1.511e-4749.25Phosphoglycerate kinase OS=Desulfovibrio desulfuri... [more]
PGKA_TRYBB1.511e-4748.51Phosphoglycerate kinase A OS=Trypanosoma brucei br... [more]
PGK2_PIG1.511e-4745.81Phosphoglycerate kinase 2 OS=Sus scrofa GN=PGK2 PE... [more]
PGK_SHEPW1.973e-4749.00Phosphoglycerate kinase OS=Shewanella piezotoleran... [more]
PGK1_RHINI1.973e-4750.50Phosphoglycerate kinase 1 OS=Rhizopus niveus GN=PG... [more]
PGK_SHEB82.577e-4748.50Phosphoglycerate kinase OS=Shewanella baltica (str... [more]
PGK_SHEB52.577e-4749.00Phosphoglycerate kinase OS=Shewanella baltica (str... [more]
PGK_NEIM02.577e-4747.50Phosphoglycerate kinase OS=Neisseria meningitidis ... [more]
PGK2_HUMAN2.577e-4745.32Phosphoglycerate kinase 2 OS=Homo sapiens GN=PGK2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10G07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10G07-M14-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069492 ID=CX069492; Name=CX069492; organism=Citrus sinensis; type=EST; length=832bp
GAAACTTATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAG
AAAAATGCATCACCATTGATGCCTGTGAGAAAGAATTTATTTTTACTCTT
ACAGCATCTACAAAACCAACTCTAATGATAAAGTTTAACTTTATCCACTC
TGGGCTGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAA
AAGGAAAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCA
GGGAGTGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGA
GATATGGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTG
AGTCACCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCA
AGCTTCTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCAAA
CACACCCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTT
CACTGAATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAACCA
TCTGGAATTGCCGTTGCTGGCACCACCTTGCTGTTGGCATCAGCAGCAAA
CTTGTCAGCAATAACAACATCAGTAGGGAGCAGAAGAGACACCCCTTTAG
ATTTGGCCTTCTCCATAAGTGACGTAGCGAGATCAAGCTTGTCTTCCTCA
ACAAGGGATGAACCAACAGAGTGTCCTTGGGCCTTGTAAAAGGTAAAGAT
CATTCCTCCACCGAGCAATAGAATGTCAACCTTCTCCAAAAGTGATTCAA
TAACACGGATCTTAGTTGACACCTTTGAACCA
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